RNA–Protein interactions for RNA: YLR207W

HRD3, Transcript of ER membrane protein that plays a central role in ERAD, yeastyeast

Gene HRD3, Length 2,502 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HRD3YLR207W RED1P14291 827 aa2.66□□□□□ -1.98
HRD3YLR207W GUK1P15454 187 aaKnown RBP2.66□□□□□ -1.98
HRD3YLR207W OSM1P21375 501 aaKnown RBP2.66□□□□□ -1.98
HRD3YLR207W CBP3P21560 335 aa2.66□□□□□ -1.98
HRD3YLR207W UBC1P21734 215 aaKnown RBP2.66□□□□□ -1.98
HRD3YLR207W YCK2P23292 546 aaKnown RBP2.66□□□□□ -1.98
HRD3YLR207W YCL049CP25577 312 aa2.66□□□□□ -1.98
HRD3YLR207W PET127P32606 800 aa2.66□□□□□ -1.98
HRD3YLR207W ECM32P32644 1121 aaKnown RBP2.66□□□□□ -1.98
HRD3YLR207W TEF4P36008 412 aaKnown RBP2.66□□□□□ -1.98
HRD3YLR207W BYE1P36106 594 aa2.66□□□□□ -1.98
HRD3YLR207W YBR259WP38338 688 aa2.66□□□□□ -1.98
HRD3YLR207W ETP1P38748 585 aaKnown RBP2.66□□□□□ -1.98
HRD3YLR207W AXL2P38928 823 aa2.66□□□□□ -1.98
HRD3YLR207W NPR2P39923 615 aa2.66□□□□□ -1.98
HRD3YLR207W PUG1P40100 303 aa2.66□□□□□ -1.98
HRD3YLR207W ARF3P40994 183 aaRIP-Chip data2.66□□□□□ -1.98not detected
HRD3YLR207W BUD27P43573 796 aaKnown RBP RIP-Chip data2.66□□□□□ -1.98not detected
HRD3YLR207W UPF3P48412 387 aaKnown RBP2.66□□□□□ -1.98
HRD3YLR207W ARC35P53731 342 aaKnown RBP2.66□□□□□ -1.98
HRD3YLR207W NSE5Q03718 556 aa2.66□□□□□ -1.98
HRD3YLR207W ARA2Q04212 335 aa2.66□□□□□ -1.98
HRD3YLR207W THI22Q06490 572 aa2.66□□□□□ -1.98
HRD3YLR207W DIA2Q08496 732 aaPredicted RBP2.66□□□□□ -1.98
HRD3YLR207W SEC3P33332 1336 aaKnown RBP2.66□□□□□ -1.98
HRD3YLR207W YLR415CO13578 112 aa2.66□□□□□ -1.98
HRD3YLR207W FUM1P08417 488 aaKnown RBP2.66□□□□□ -1.98
HRD3YLR207W MTF2P10849 440 aa2.66□□□□□ -1.98
HRD3YLR207W MCM3P24279 971 aaKnown RBP2.66□□□□□ -1.98
HRD3YLR207W BRF1P29056 596 aa2.66□□□□□ -1.98
HRD3YLR207W CNS1P33313 385 aa2.66□□□□□ -1.98
HRD3YLR207W PGM1P33401 570 aaKnown RBP2.66□□□□□ -1.98
HRD3YLR207W YKL100CP34248 587 aa2.66□□□□□ -1.98
HRD3YLR207W NOP4P37838 685 aaKnown RBP2.66□□□□□ -1.98
HRD3YLR207W SWD1P39706 426 aa2.66□□□□□ -1.98
HRD3YLR207W UBP7P40453 1071 aa2.66□□□□□ -1.98
HRD3YLR207W YGR016WP53209 190 aa2.66□□□□□ -1.98
HRD3YLR207W ASI2P53895 289 aa2.66□□□□□ -1.98
HRD3YLR207W RPT6Q01939 405 aaKnown RBP2.66□□□□□ -1.98
HRD3YLR207W NRG1Q03125 231 aa2.66□□□□□ -1.98
HRD3YLR207W RXT3Q07458 294 aa2.66□□□□□ -1.98
HRD3YLR207W MED7Q08278 222 aa2.66□□□□□ -1.98
HRD3YLR207W MCA1Q08601 432 aa2.66□□□□□ -1.98
HRD3YLR207W CTI6Q08923 506 aa2.66□□□□□ -1.98
HRD3YLR207W UPC2Q12151 913 aa2.66□□□□□ -1.98
HRD3YLR207W RPO41P13433 1351 aaKnown RBP2.65□□□□□ -1.98
HRD3YLR207W SEM1O94742 89 aa2.65□□□□□ -1.99
HRD3YLR207W HIS5P07172 385 aa2.65□□□□□ -1.99
HRD3YLR207W POL3P15436 1097 aa2.65□□□□□ -1.99
HRD3YLR207W FRS1P15624 595 aaKnown RBP2.65□□□□□ -1.99
HRD3YLR207W MET8P15807 274 aa2.65□□□□□ -1.99
HRD3YLR207W NCP1P16603 691 aaKnown RBP2.65□□□□□ -1.99
HRD3YLR207W ACO1P19414 778 aaKnown RBP RIP-Chip data2.65□□□□□ -1.99not detected
HRD3YLR207W CAD1P24813 409 aaKnown RBP2.65□□□□□ -1.99
HRD3YLR207W MTH1P35198 433 aa2.65□□□□□ -1.99
HRD3YLR207W YER010CP40011 234 aa2.65□□□□□ -1.99
HRD3YLR207W JEM1P40358 645 aa2.65□□□□□ -1.99
HRD3YLR207W LYS14P40971 790 aa2.65□□□□□ -1.99
HRD3YLR207W IRC6P43615 237 aa2.65□□□□□ -1.99
HRD3YLR207W MET12P46151 657 aa2.65□□□□□ -1.99
HRD3YLR207W GCV2P49095 1034 aa2.65□□□□□ -1.99
HRD3YLR207W TAF4P50105 388 aa2.65□□□□□ -1.99
HRD3YLR207W YML6P51998 286 aa2.65□□□□□ -1.99
HRD3YLR207W YGL082WP53155 381 aa2.65□□□□□ -1.99
HRD3YLR207W YAP1802P53309 568 aa2.65□□□□□ -1.99
HRD3YLR207W CPR6P53691 371 aaKnown RBP2.65□□□□□ -1.99
HRD3YLR207W TIM10P87108 93 aa2.65□□□□□ -1.99
HRD3YLR207W VPS64Q03944 604 aa2.65□□□□□ -1.99
HRD3YLR207W TAF11Q04226 346 aa2.65□□□□□ -1.99
HRD3YLR207W GAD1Q04792 585 aa2.65□□□□□ -1.99
HRD3YLR207W RGA2Q06407 1009 aa2.65□□□□□ -1.99
HRD3YLR207W MCM21Q06675 368 aa2.65□□□□□ -1.99
HRD3YLR207W CSR1Q06705 408 aaKnown RBP2.65□□□□□ -1.99
HRD3YLR207W PEX19Q07418 342 aa2.65□□□□□ -1.99
HRD3YLR207W HUA2Q12134 243 aa2.65□□□□□ -1.99
HRD3YLR207W SFI1Q12369 946 aa2.65□□□□□ -1.99
HRD3YLR207W LPX1Q12405 387 aaKnown RBP2.65□□□□□ -1.99
HRD3YLR207W SKM1Q12469 655 aa2.65□□□□□ -1.99
HRD3YLR207W RSF2P46974 1380 aa2.65□□□□□ -1.99
HRD3YLR207W PCK1P10963 549 aa2.65□□□□□ -1.99
HRD3YLR207W CAF20P12962 161 aaKnown RBP2.65□□□□□ -1.99
HRD3YLR207W CDC26P14724 124 aa2.65□□□□□ -1.99
HRD3YLR207W KRR1P25586 316 aaPredicted RBP2.65□□□□□ -1.99
HRD3YLR207W SWC3P31376 625 aa2.65□□□□□ -1.99
HRD3YLR207W RKM3P38222 552 aa2.65□□□□□ -1.99
HRD3YLR207W RIC1P40395 1056 aa2.65□□□□□ -1.99
HRD3YLR207W IRC5P43610 853 aa2.65□□□□□ -1.99
HRD3YLR207W LEE1Q02799 301 aaKnown RBP2.65□□□□□ -1.99
HRD3YLR207W MFB1Q04922 465 aa2.65□□□□□ -1.99
HRD3YLR207W ASM4Q05166 528 aa2.65□□□□□ -1.99
HRD3YLR207W ADY3Q07732 790 aa2.65□□□□□ -1.99
HRD3YLR207W GPB1Q08886 897 aa2.65□□□□□ -1.99
HRD3YLR207W BMS1Q08965 1183 aaKnown RBP2.65□□□□□ -1.99
HRD3YLR207W TRM8Q12009 286 aa2.65□□□□□ -1.99
HRD3YLR207W ISA2Q12425 185 aa2.65□□□□□ -1.99
HRD3YLR207W ZRT2Q12436 422 aa2.65□□□□□ -1.99
HRD3YLR207W TY4B-HP0C2J7 1802 aa2.65□□□□□ -1.99
HRD3YLR207W TY4B-JP47024 1803 aa2.65□□□□□ -1.99
HRD3YLR207W SUI2P20459 304 aaKnown RBP2.64□□□□□ -1.99
HRD3YLR207W KIN82P25341 720 aa2.64□□□□□ -1.99
Retrieved 100 of 5,963 RNA–protein pairs in 22.7 ms