RNA–Protein interactions for RNA: YLR055C

SPT8, Transcript of Subunit of the SAGA transcriptional regulatory complex, yeastyeast

Gene SPT8, Length 1,809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPT8YLR055C LAA1P39526 2014 aa11.36□□□□□ -0.59
SPT8YLR055C LHS1P36016 881 aa11.35□□□□□ -0.59
SPT8YLR055C TSC10P38342 320 aa11.35□□□□□ -0.59
SPT8YLR055C MSC7P38694 644 aa11.35□□□□□ -0.59
SPT8YLR055C JHD1P40034 492 aa11.35□□□□□ -0.59
SPT8YLR055C DIM1P41819 318 aaKnown RBP11.35□□□□□ -0.59
SPT8YLR055C ALY2P47029 1046 aa11.35□□□□□ -0.59
SPT8YLR055C MSB1P21339 1137 aaKnown RBP11.35□□□□□ -0.59
SPT8YLR055C RAD14P28519 371 aa11.35□□□□□ -0.59
SPT8YLR055C RRP14P36080 434 aaKnown RBP11.35□□□□□ -0.59
SPT8YLR055C TGL4P36165 910 aa11.35□□□□□ -0.59
SPT8YLR055C TMA108P40462 946 aa11.35□□□□□ -0.59
SPT8YLR055C BCP1Q06338 283 aa11.35□□□□□ -0.59
SPT8YLR055C YPR202WQ08993 238 aa11.35□□□□□ -0.59
SPT8YLR055C ECM3Q99252 613 aa11.35□□□□□ -0.59
SPT8YLR055C TRX1P22217 103 aaKnown RBP11.34□□□□□ -0.59
SPT8YLR055C SIP2P34164 415 aaKnown RBP11.34□□□□□ -0.59
SPT8YLR055C SLX1P38324 304 aa11.34□□□□□ -0.59
SPT8YLR055C MRM2P53123 320 aa11.34□□□□□ -0.59
SPT8YLR055C PUS2P53167 370 aa11.34□□□□□ -0.59
SPT8YLR055C TEP1P53916 434 aa11.34□□□□□ -0.59
SPT8YLR055C DNL4Q08387 944 aaPredicted RBP11.34□□□□□ -0.59
SPT8YLR055C ENO1P00924 437 aaKnown RBP11.33□□□□□ -0.6
SPT8YLR055C TEF1P02994 458 aaKnown RBP11.33□□□□□ -0.6
SPT8YLR055C SLY1P22213 666 aa11.33□□□□□ -0.6
SPT8YLR055C SEC66P33754 206 aa11.33□□□□□ -0.6
SPT8YLR055C FRT2P39734 528 aa11.33□□□□□ -0.6
SPT8YLR055C SAW1P39735 261 aa11.33□□□□□ -0.6
SPT8YLR055C STL1P39932 569 aa11.33□□□□□ -0.6
SPT8YLR055C RLP7P40693 322 aaKnown RBP11.33□□□□□ -0.6
SPT8YLR055C STB4P50104 949 aa11.33□□□□□ -0.6
SPT8YLR055C THI7Q05998 598 aa11.33□□□□□ -0.6
SPT8YLR055C KAP95Q06142 861 aaKnown RBP11.33□□□□□ -0.6
SPT8YLR055C YLR455WQ06188 304 aa11.33□□□□□ -0.6
SPT8YLR055C ATG17Q06410 417 aa11.33□□□□□ -0.6
SPT8YLR055C YPR097WQ06839 1073 aa11.33□□□□□ -0.6
SPT8YLR055C EST1P17214 699 aaPredicted RBP11.32□□□□□ -0.6
SPT8YLR055C RRN3P36070 627 aa11.32□□□□□ -0.6
SPT8YLR055C FLC2P39719 783 aa11.32□□□□□ -0.6
SPT8YLR055C RSC8P43609 557 aaKnown RBP11.32□□□□□ -0.6
SPT8YLR055C FAR3P46671 204 aa11.32□□□□□ -0.6
SPT8YLR055C NUT1P53114 1132 aa11.32□□□□□ -0.6
SPT8YLR055C SNU56Q03782 492 aaKnown RBP11.32□□□□□ -0.6
SPT8YLR055C SNX3Q08826 162 aaKnown RBP11.32□□□□□ -0.6
SPT8YLR055C GIS3Q12418 502 aa11.32□□□□□ -0.6
SPT8YLR055C YER152CP10356 443 aa11.32□□□□□ -0.6
SPT8YLR055C MSD1P15179 658 aaKnown RBP11.32□□□□□ -0.6
SPT8YLR055C MEF1P25039 761 aa11.32□□□□□ -0.6
SPT8YLR055C CDC20P26309 610 aa11.32□□□□□ -0.6
SPT8YLR055C PCM1P38628 557 aaKnown RBP11.32□□□□□ -0.6
SPT8YLR055C YHR054CP38780 354 aa11.32□□□□□ -0.6
SPT8YLR055C MAM33P40513 266 aa11.32□□□□□ -0.6
SPT8YLR055C OPT1P40897 799 aa11.32□□□□□ -0.6
SPT8YLR055C UTP8P53276 713 aaKnown RBP11.32□□□□□ -0.6
SPT8YLR055C AHC1Q12433 566 aa11.32□□□□□ -0.6
SPT8YLR055C CTF3Q12748 733 aa11.32□□□□□ -0.6
SPT8YLR055C YDR089WP38966 869 aa11.31□□□□□ -0.6
SPT8YLR055C SCC4P40090 624 aa11.31□□□□□ -0.6
SPT8YLR055C EAR1Q03212 550 aa11.31□□□□□ -0.6
SPT8YLR055C CDD1Q06549 142 aa11.31□□□□□ -0.6
SPT8YLR055C MST1P07236 462 aa11.3□□□□□ -0.6
SPT8YLR055C SBP1P10080 294 aaKnown RBP11.3□□□□□ -0.6
SPT8YLR055C PDC5P16467 563 aaKnown RBP11.3□□□□□ -0.6
SPT8YLR055C DIA4P38705 446 aaPredicted RBP11.3□□□□□ -0.6
SPT8YLR055C YJL206CP39529 758 aa11.3□□□□□ -0.6
SPT8YLR055C AIM20P40451 204 aa11.3□□□□□ -0.6
SPT8YLR055C MAD3P47074 515 aa11.3□□□□□ -0.6
SPT8YLR055C SND1Q04007 877 aa11.3□□□□□ -0.6
SPT8YLR055C YSH1Q06224 779 aaPredicted RBP11.3□□□□□ -0.6
SPT8YLR055C NSE1Q07913 336 aa11.3□□□□□ -0.6
SPT8YLR055C ESC8Q08119 714 aa11.3□□□□□ -0.6
SPT8YLR055C COX11P19516 300 aaKnown RBP11.3□□□□□ -0.6
SPT8YLR055C ADK2P26364 225 aa11.3□□□□□ -0.6
SPT8YLR055C MRPL7P36519 292 aa11.3□□□□□ -0.6
SPT8YLR055C XDJ1P39102 459 aa11.3□□□□□ -0.6
SPT8YLR055C CHS6P40955 746 aa11.3□□□□□ -0.6
SPT8YLR055C RCR2Q03446 210 aaKnown RBP11.3□□□□□ -0.6
SPT8YLR055C SXM1Q04175 944 aaKnown RBP11.3□□□□□ -0.6
SPT8YLR055C GET4Q12125 312 aa11.3□□□□□ -0.6
SPT8YLR055C STB3Q12427 513 aa11.3□□□□□ -0.6
SPT8YLR055C AVL9Q12500 764 aa11.3□□□□□ -0.6
SPT8YLR055C CIT2P08679 460 aa11.29□□□□□ -0.6
SPT8YLR055C VPS34P22543 875 aa11.29□□□□□ -0.6
SPT8YLR055C CYS3P31373 394 aaKnown RBP11.29□□□□□ -0.6
SPT8YLR055C APN2P38207 520 aa11.29□□□□□ -0.6
SPT8YLR055C PEP8P40335 379 aa11.29□□□□□ -0.6
SPT8YLR055C SNZ3P43545 298 aa11.29□□□□□ -0.6
SPT8YLR055C ALT1P52893 592 aa11.29□□□□□ -0.6
SPT8YLR055C RTA1P53047 317 aa11.29□□□□□ -0.6
SPT8YLR055C SNZ2P53824 298 aa11.29□□□□□ -0.6
SPT8YLR055C SLT2Q00772 484 aa11.29□□□□□ -0.6
SPT8YLR055C EMI2Q04409 500 aaKnown RBP11.29□□□□□ -0.6
SPT8YLR055C REC8Q12188 680 aa11.29□□□□□ -0.6
SPT8YLR055C PKH2Q12236 1081 aaKnown RBP11.29□□□□□ -0.6
SPT8YLR055C RRP36Q12481 300 aaPredicted RBP11.29□□□□□ -0.6
SPT8YLR055C GAL10P04397 699 aa11.28□□□□□ -0.6
SPT8YLR055C IMA3P0CW40 589 aa11.28□□□□□ -0.6
SPT8YLR055C IMA4P0CW41 589 aa11.28□□□□□ -0.6
SPT8YLR055C GFD2P25370 566 aaKnown RBP11.28□□□□□ -0.6
SPT8YLR055C MEI4P29467 408 aa11.28□□□□□ -0.6
Retrieved 100 of 5,963 RNA–protein pairs in 55.3 ms