RNA–Protein interactions for RNA: YLR039C

RIC1, Transcript of Protein involved in retrograde transport to the cis-Golgi network, yeastyeast

Gene RIC1, Length 3,171 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RIC1YLR039C DSS4P32601 143 aa2.37□□□□□ -2.03
RIC1YLR039C RRN3P36070 627 aa2.37□□□□□ -2.03
RIC1YLR039C MUD2P36084 527 aaKnown RBP2.37□□□□□ -2.03
RIC1YLR039C KSP1P38691 1029 aaKnown RBP2.37□□□□□ -2.03
RIC1YLR039C YEL025CP39991 1188 aa2.37□□□□□ -2.03
RIC1YLR039C AIM6Q07716 390 aa2.37□□□□□ -2.03
RIC1YLR039C CAB2P40506 365 aa2.37□□□□□ -2.03
RIC1YLR039C TUF1P02992 437 aaKnown RBP2.36□□□□□ -2.03
RIC1YLR039C PRP45P28004 379 aaPredicted RBP2.36□□□□□ -2.03
RIC1YLR039C UBP5P39944 805 aa2.36□□□□□ -2.03
RIC1YLR039C CTF18P49956 741 aa2.36□□□□□ -2.03
RIC1YLR039C SUN4P53616 420 aa2.36□□□□□ -2.03
RIC1YLR039C ESF2P53743 316 aaKnown RBP2.36□□□□□ -2.03
RIC1YLR039C PCL5P38794 229 aa2.36□□□□□ -2.03
RIC1YLR039C IMA1P53051 589 aa2.36□□□□□ -2.03
RIC1YLR039C RPS15Q01855 142 aaKnown RBP2.36□□□□□ -2.03
RIC1YLR039C VPS64Q03944 604 aa2.36□□□□□ -2.03
RIC1YLR039C MRN1Q08925 612 aaKnown RBP RIP-Chip data2.36□□□□□ -2.03not detected
RIC1YLR039C COX17Q12287 69 aa2.36□□□□□ -2.03
RIC1YLR039C LAM4P38800 1345 aa2.35□□□□□ -2.03
RIC1YLR039C STE4P18851 423 aa2.35□□□□□ -2.03
RIC1YLR039C CHS3P29465 1165 aa2.35□□□□□ -2.03
RIC1YLR039C SLC1P33333 303 aa2.35□□□□□ -2.03
RIC1YLR039C YER010CP40011 234 aa2.35□□□□□ -2.03
RIC1YLR039C NRD1P53617 575 aaKnown RBP RIP-Chip data2.35□□□□□ -2.03not detected
RIC1YLR039C SNO4Q04902 237 aa2.35□□□□□ -2.03
RIC1YLR039C CSR1Q06705 408 aaKnown RBP2.35□□□□□ -2.03
RIC1YLR039C ESC8Q08119 714 aa2.35□□□□□ -2.03
RIC1YLR039C HSP33Q08914 237 aaKnown RBP2.35□□□□□ -2.03
RIC1YLR039C HSP32Q08992 237 aa2.35□□□□□ -2.03
RIC1YLR039C RKI1Q12189 258 aa2.35□□□□□ -2.03
RIC1YLR039C SEC12P11655 471 aa2.35□□□□□ -2.03
RIC1YLR039C SAN1P22470 610 aa2.35□□□□□ -2.03
RIC1YLR039C GFD2P25370 566 aaKnown RBP2.35□□□□□ -2.03
RIC1YLR039C NTH1P32356 751 aa2.35□□□□□ -2.03
RIC1YLR039C XRS2P33301 854 aa2.35□□□□□ -2.03
RIC1YLR039C ARO9P38840 513 aaPredicted RBP2.35□□□□□ -2.03
RIC1YLR039C PSD1P39006 500 aa2.35□□□□□ -2.03
RIC1YLR039C BST1P43571 1029 aa2.35□□□□□ -2.03
RIC1YLR039C PSP1P50896 841 aaKnown RBP2.35□□□□□ -2.03
RIC1YLR039C YIP4P53093 235 aa2.35□□□□□ -2.03
RIC1YLR039C USA1Q03714 838 aa2.35□□□□□ -2.03
RIC1YLR039C TRS23Q03784 219 aa2.35□□□□□ -2.03
RIC1YLR039C CRF1Q04930 467 aa2.35□□□□□ -2.03
RIC1YLR039C YSH1Q06224 779 aaPredicted RBP2.35□□□□□ -2.03
RIC1YLR039C CLF1Q12309 687 aaPredicted RBP2.35□□□□□ -2.03
RIC1YLR039C RER1P25560 188 aa2.35□□□□□ -2.03
RIC1YLR039C YPT10P38146 199 aa2.35□□□□□ -2.03
RIC1YLR039C CBR1P38626 284 aaKnown RBP2.35□□□□□ -2.03
RIC1YLR039C UPF3P48412 387 aaKnown RBP2.35□□□□□ -2.03
RIC1YLR039C MFM1Q02783 413 aa2.35□□□□□ -2.03
RIC1YLR039C YML119WQ03208 357 aa2.35□□□□□ -2.03
RIC1YLR039C ARA2Q04212 335 aa2.35□□□□□ -2.03
RIC1YLR039C RRI2Q12348 645 aa2.35□□□□□ -2.03
RIC1YLR039C PNO1Q99216 274 aaKnown RBP2.35□□□□□ -2.03
RIC1YLR039C PMI40P29952 429 aaKnown RBP2.34□□□□□ -2.03
RIC1YLR039C YEL068CP39977 110 aa2.34□□□□□ -2.03
RIC1YLR039C FMP10P40098 244 aa2.34□□□□□ -2.03
RIC1YLR039C CCT7P42943 550 aaKnown RBP2.34□□□□□ -2.03
RIC1YLR039C IDS2P46958 469 aa2.34□□□□□ -2.03
RIC1YLR039C COG1P53079 417 aa2.34□□□□□ -2.03
RIC1YLR039C BUD17P53727 317 aa2.34□□□□□ -2.03
RIC1YLR039C SMX3P54999 86 aaPredicted RBP2.34□□□□□ -2.03
RIC1YLR039C THO2P53552 1597 aaKnown RBP2.34□□□□□ -2.04
RIC1YLR039C CTT1P06115 562 aa2.34□□□□□ -2.04
RIC1YLR039C BIK1P11709 440 aa2.34□□□□□ -2.04
RIC1YLR039C AAC3P18238 307 aa2.34□□□□□ -2.04
RIC1YLR039C YCR061WP25639 631 aa2.34□□□□□ -2.04
RIC1YLR039C RPN12P32496 274 aa2.34□□□□□ -2.04
RIC1YLR039C FSH1P38777 243 aaKnown RBP2.34□□□□□ -2.04
RIC1YLR039C ATG4P53867 494 aa2.34□□□□□ -2.04
RIC1YLR039C CBK1P53894 756 aa2.34□□□□□ -2.04
RIC1YLR039C YNL092WP53934 400 aa2.34□□□□□ -2.04
RIC1YLR039C DAK1P54838 584 aaKnown RBP2.34□□□□□ -2.04
RIC1YLR039C ATG21Q02887 496 aa2.34□□□□□ -2.04
RIC1YLR039C YMR018WQ04364 514 aa2.34□□□□□ -2.04
RIC1YLR039C UFO1Q04511 668 aa2.34□□□□□ -2.04
RIC1YLR039C SWR1Q05471 1514 aa2.34□□□□□ -2.04
RIC1YLR039C PET122P10355 254 aa2.33□□□□□ -2.04
RIC1YLR039C CAP1P28495 268 aaKnown RBP2.33□□□□□ -2.04
RIC1YLR039C DHR2P36009 735 aaPredicted RBP2.33□□□□□ -2.04
RIC1YLR039C MIT1P40002 666 aa2.33□□□□□ -2.04
RIC1YLR039C RAD26P40352 1085 aa2.33□□□□□ -2.04
RIC1YLR039C NDC80P40460 691 aa2.33□□□□□ -2.04
RIC1YLR039C ZAP1P47043 880 aa2.33□□□□□ -2.04
RIC1YLR039C SLI1P53304 468 aa2.33□□□□□ -2.04
RIC1YLR039C RIA1P53893 1110 aa2.33□□□□□ -2.04
RIC1YLR039C SSL2Q00578 843 aa2.33□□□□□ -2.04
RIC1YLR039C VAM6Q07468 1049 aa2.33□□□□□ -2.04
RIC1YLR039C LEU2P04173 364 aaPredicted RBP2.33□□□□□ -2.04
RIC1YLR039C YPK1P12688 680 aaKnown RBP2.33□□□□□ -2.04
RIC1YLR039C CNE1P27825 502 aa2.33□□□□□ -2.04
RIC1YLR039C CBF2P32504 956 aa2.33□□□□□ -2.04
RIC1YLR039C TRM2P33753 639 aa2.33□□□□□ -2.04
RIC1YLR039C GEX2P36173 615 aa2.33□□□□□ -2.04
RIC1YLR039C VPS8P39702 1274 aa2.33□□□□□ -2.04
RIC1YLR039C GIP4P39732 760 aa2.33□□□□□ -2.04
RIC1YLR039C KAP123P40069 1113 aaKnown RBP2.33□□□□□ -2.04
RIC1YLR039C NDE1P40215 560 aa2.33□□□□□ -2.04
RIC1YLR039C AIM21P40563 679 aa2.33□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 382.5 ms