RNA–Protein interactions for RNA: YLL046C

RNP1, Transcript of Ribonucleoprotein that contains two RNA recognition motifs (RRM), yeast

Gene RNP1, Length 750 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RNP1	YLL046C	AAT1	Q01802	451 aa		3.08	□□□□□ -1.92
RNP1	YLL046C	HRD3	Q05787	833 aa		3.08	□□□□□ -1.92
RNP1	YLL046C	STP4	Q07351	490 aa		3.08	□□□□□ -1.92
RNP1	YLL046C	YDL121C	Q07541	149 aa		3.08	□□□□□ -1.92
RNP1	YLL046C	NUP145	P49687	1317 aa		3.08	□□□□□ -1.92
RNP1	YLL046C	BI2	P03873	423 aa		3.07	□□□□□ -1.92
RNP1	YLL046C	HOP1	P20050	605 aa		3.07	□□□□□ -1.92
RNP1	YLL046C	SFL1	P20134	766 aa		3.07	□□□□□ -1.92
RNP1	YLL046C	YCR043C	P25361	127 aa		3.07	□□□□□ -1.92
RNP1	YLL046C	CDS1	P38221	457 aa		3.07	□□□□□ -1.92
RNP1	YLL046C	PAF1	P38351	445 aa		3.07	□□□□□ -1.92
RNP1	YLL046C	BOP3	P53958	396 aa		3.07	□□□□□ -1.92
RNP1	YLL046C	SND1	Q04007	877 aa		3.07	□□□□□ -1.92
RNP1	YLL046C	PPN1	Q04119	674 aa		3.07	□□□□□ -1.92
RNP1	YLL046C	SLX4	Q12098	748 aa		3.07	□□□□□ -1.92
RNP1	YLL046C	NYV1	Q12255	253 aa		3.07	□□□□□ -1.92
RNP1	YLL046C	YEF3	P16521	1044 aa	Known RBP	3.06	□□□□□ -1.92
RNP1	YLL046C	COQ3	P27680	312 aa		3.06	□□□□□ -1.92
RNP1	YLL046C	YJU2	P28320	278 aa	Predicted RBP	3.06	□□□□□ -1.92
RNP1	YLL046C	CAP1	P28495	268 aa	Known RBP	3.06	□□□□□ -1.92
RNP1	YLL046C	YOX1	P34161	385 aa		3.06	□□□□□ -1.92
RNP1	YLL046C	CCL1	P37366	393 aa		3.06	□□□□□ -1.92
RNP1	YLL046C	YEL025C	P39991	1188 aa		3.06	□□□□□ -1.92
RNP1	YLL046C	PMT3	P47190	753 aa		3.06	□□□□□ -1.92
RNP1	YLL046C	YOR378W	Q08902	515 aa		3.06	□□□□□ -1.92
RNP1	YLL046C	MRN1	Q08925	612 aa	Known RBP RIP-Chip data	3.06	□□□□□ -1.92	not detected
RNP1	YLL046C	TMA7	Q3E764	64 aa	Known RBP	3.06	□□□□□ -1.92
RNP1	YLL046C	ACO1	P19414	778 aa	Known RBP RIP-Chip data	3.05	□□□□□ -1.92	not detected
RNP1	YLL046C	PWP2	P25635	923 aa	Known RBP	3.05	□□□□□ -1.92
RNP1	YLL046C	RPT3	P33298	428 aa	Known RBP	3.05	□□□□□ -1.92
RNP1	YLL046C	VPS24	P36095	224 aa	Known RBP	3.05	□□□□□ -1.92
RNP1	YLL046C	ERP2	P39704	215 aa		3.05	□□□□□ -1.92
RNP1	YLL046C	BFA1	P47113	574 aa		3.05	□□□□□ -1.92
RNP1	YLL046C	YNL193W	P53870	558 aa		3.05	□□□□□ -1.92
RNP1	YLL046C	UME1	Q03010	460 aa		3.05	□□□□□ -1.92
RNP1	YLL046C	UGO1	Q03327	502 aa		3.05	□□□□□ -1.92
RNP1	YLL046C	HLR1	Q04429	423 aa		3.05	□□□□□ -1.92
RNP1	YLL046C	GRS2	Q06817	618 aa		3.05	□□□□□ -1.92
RNP1	YLL046C	THI73	Q07904	523 aa		3.05	□□□□□ -1.92
RNP1	YLL046C	FAP7	Q12055	197 aa	Predicted RBP	3.05	□□□□□ -1.92
RNP1	YLL046C	YIL152W	P40455	235 aa		3.04	□□□□□ -1.92
RNP1	YLL046C	SDA1	P53313	767 aa	Known RBP	3.04	□□□□□ -1.92
RNP1	YLL046C	USA1	Q03714	838 aa		3.04	□□□□□ -1.92
RNP1	YLL046C	ATG16	Q03818	150 aa		3.04	□□□□□ -1.92
RNP1	YLL046C	VMS1	Q04311	632 aa	Known RBP	3.04	□□□□□ -1.92
RNP1	YLL046C	UBX3	Q12229	455 aa		3.04	□□□□□ -1.92
RNP1	YLL046C	AHA1	Q12449	350 aa	Known RBP	3.04	□□□□□ -1.92
RNP1	YLL046C	TYS1	P36421	394 aa	Known RBP	3.03	□□□□□ -1.92
RNP1	YLL046C	EHT1	P38295	451 aa		3.03	□□□□□ -1.92
RNP1	YLL046C	TES1	P41903	349 aa	Known RBP	3.03	□□□□□ -1.92
RNP1	YLL046C	TAF4	P50105	388 aa		3.03	□□□□□ -1.92
RNP1	YLL046C	GPG1	P53130	126 aa		3.03	□□□□□ -1.92
RNP1	YLL046C	TMA64	Q04600	565 aa	Known RBP	3.03	□□□□□ -1.92
RNP1	YLL046C	ARR3	Q06598	404 aa		3.03	□□□□□ -1.92
RNP1	YLL046C	ATX2	Q12067	313 aa		3.03	□□□□□ -1.92
RNP1	YLL046C	MPD2	Q99316	277 aa		3.03	□□□□□ -1.92
RNP1	YLL046C	RPS17A	P02407	136 aa	Known RBP	3.02	□□□□□ -1.93
RNP1	YLL046C	RPS17B	P14127	136 aa	Known RBP	3.02	□□□□□ -1.93
RNP1	YLL046C	PRM2	P40534	656 aa		3.02	□□□□□ -1.93
RNP1	YLL046C	PEX14	P53112	341 aa		3.02	□□□□□ -1.93
RNP1	YLL046C	MDG1	P53885	366 aa		3.02	□□□□□ -1.93
RNP1	YLL046C	COG6	P53959	839 aa		3.02	□□□□□ -1.93
RNP1	YLL046C	CYK3	Q07533	885 aa		3.02	□□□□□ -1.93
RNP1	YLL046C	TFC4	P33339	1025 aa		3.01	□□□□□ -1.93
RNP1	YLL046C	YBR071W	P38243	211 aa		3.01	□□□□□ -1.93
RNP1	YLL046C	ARC40	P38328	384 aa	Known RBP	3.01	□□□□□ -1.93
RNP1	YLL046C	IMD2	P38697	523 aa	Known RBP	3.01	□□□□□ -1.93
RNP1	YLL046C	RTT107	P38850	1070 aa		3.01	□□□□□ -1.93
RNP1	YLL046C	PEA2	P40091	420 aa		3.01	□□□□□ -1.93
RNP1	YLL046C	GPP1	P41277	250 aa	Known RBP	3.01	□□□□□ -1.93
RNP1	YLL046C	IMD3	P50095	523 aa	Known RBP	3.01	□□□□□ -1.93
RNP1	YLL046C	YGR021W	P53212	290 aa		3.01	□□□□□ -1.93
RNP1	YLL046C	NOP15	P53927	220 aa	Predicted RBP	3.01	□□□□□ -1.93
RNP1	YLL046C	YNL034W	P53963	612 aa		3.01	□□□□□ -1.93
RNP1	YLL046C	SVL3	Q03088	825 aa	Known RBP	3.01	□□□□□ -1.93
RNP1	YLL046C	SNU56	Q03782	492 aa	Known RBP	3.01	□□□□□ -1.93
RNP1	YLL046C	YMR034C	Q05131	434 aa	Predicted RBP	3.01	□□□□□ -1.93
RNP1	YLL046C	COG4	Q06096	861 aa		3.01	□□□□□ -1.93
RNP1	YLL046C	YLR001C	Q07895	862 aa		3.01	□□□□□ -1.93
RNP1	YLL046C	DSE3	Q08729	430 aa		3.01	□□□□□ -1.93
RNP1	YLL046C	NKP1	Q12493	238 aa		3.01	□□□□□ -1.93
RNP1	YLL046C	PNO1	Q99216	274 aa	Known RBP	3.01	□□□□□ -1.93
RNP1	YLL046C	GAL4	P04386	881 aa		3	□□□□□ -1.93
RNP1	YLL046C	ATP4	P05626	244 aa		3	□□□□□ -1.93
RNP1	YLL046C	PIF1	P07271	859 aa		3	□□□□□ -1.93
RNP1	YLL046C	SWI6	P09959	803 aa		3	□□□□□ -1.93
RNP1	YLL046C	DPB3	P27344	201 aa		3	□□□□□ -1.93
RNP1	YLL046C	MPE1	P35728	441 aa	Known RBP	3	□□□□□ -1.93
RNP1	YLL046C	LRO1	P40345	661 aa		3	□□□□□ -1.93
RNP1	YLL046C	MET13	P53128	600 aa		3	□□□□□ -1.93
RNP1	YLL046C	TGL2	P54857	326 aa		3	□□□□□ -1.93
RNP1	YLL046C	TRE2	Q08693	809 aa		3	□□□□□ -1.93
RNP1	YLL046C	AAC1	P04710	309 aa		2.99	□□□□□ -1.93
RNP1	YLL046C	SST2	P11972	698 aa	Known RBP	2.99	□□□□□ -1.93
RNP1	YLL046C	YPK1	P12688	680 aa	Known RBP	2.99	□□□□□ -1.93
RNP1	YLL046C	PGI1	P12709	554 aa	Known RBP	2.99	□□□□□ -1.93
RNP1	YLL046C	PLC1	P32383	869 aa		2.99	□□□□□ -1.93
RNP1	YLL046C	FMP46	P36141	133 aa	Known RBP	2.99	□□□□□ -1.93
RNP1	YLL046C	MTQ2	Q03920	221 aa	Predicted RBP	2.99	□□□□□ -1.93
RNP1	YLL046C	YMR317W	Q04893	1140 aa		2.99	□□□□□ -1.93

Retrieved 100 of 5,963 RNA–protein pairs in 129.6 ms