RNA–Protein interactions for RNA: YKR059W

TIF1, Transcript of Translation initiation factor eIF4A, yeast

Gene TIF1, Length 1,188 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TIF1	YKR059W	MRPL13	Q02204	264 aa		6.99	□□□□□ -1.29
TIF1	YKR059W	YKR011C	Q02209	353 aa		6.99	□□□□□ -1.29
TIF1	YKR059W	SPN1	Q06505	410 aa	Predicted RBP	6.99	□□□□□ -1.29
TIF1	YKR059W	YOR022C	Q12204	715 aa		6.99	□□□□□ -1.29
TIF1	YKR059W	SVS1	Q12254	260 aa		6.99	□□□□□ -1.29
TIF1	YKR059W	TEL1	P38110	2787 aa		6.99	□□□□□ -1.29
TIF1	YKR059W	SRP54	P20424	541 aa	Known RBP	6.98	□□□□□ -1.29
TIF1	YKR059W	MAK31	P23059	88 aa		6.98	□□□□□ -1.29
TIF1	YKR059W	KIN82	P25341	720 aa		6.98	□□□□□ -1.29
TIF1	YKR059W	SRO9	P25567	434 aa	Known RBP	6.98	□□□□□ -1.29
TIF1	YKR059W	SWI3	P32591	825 aa		6.98	□□□□□ -1.29
TIF1	YKR059W	STE13	P33894	931 aa		6.98	□□□□□ -1.29
TIF1	YKR059W	SHM2	P37291	469 aa	Known RBP	6.98	□□□□□ -1.29
TIF1	YKR059W	FAT1	P38225	669 aa		6.98	□□□□□ -1.29
TIF1	YKR059W	ALT1	P52893	592 aa		6.98	□□□□□ -1.29
TIF1	YKR059W	SAP4	P53036	818 aa		6.98	□□□□□ -1.29
TIF1	YKR059W	RAI1	P53063	387 aa	Known RBP	6.98	□□□□□ -1.29
TIF1	YKR059W	MMR1	Q06324	491 aa		6.98	□□□□□ -1.29
TIF1	YKR059W	GPM1	P00950	247 aa	Known RBP	6.97	□□□□□ -1.29
TIF1	YKR059W	CAD1	P24813	409 aa	Known RBP	6.97	□□□□□ -1.29
TIF1	YKR059W	BUD2	P33314	1104 aa		6.97	□□□□□ -1.29
TIF1	YKR059W	TVP23	P38962	199 aa		6.97	□□□□□ -1.29
TIF1	YKR059W	UME6	P39001	836 aa		6.97	□□□□□ -1.29
TIF1	YKR059W	CCT8	P47079	568 aa	Known RBP	6.97	□□□□□ -1.29
TIF1	YKR059W	YJR039W	P47107	1121 aa		6.97	□□□□□ -1.29
TIF1	YKR059W	YMR210W	Q03649	449 aa		6.97	□□□□□ -1.29
TIF1	YKR059W	DCS2	Q12123	353 aa		6.97	□□□□□ -1.29
TIF1	YKR059W	Q0142	Q9ZZW4	58 aa		6.97	□□□□□ -1.29
TIF1	YKR059W	TRK2	P28584	889 aa		6.96	□□□□□ -1.3
TIF1	YKR059W	PXA2	P34230	853 aa		6.96	□□□□□ -1.3
TIF1	YKR059W	VID28	P40547	921 aa		6.96	□□□□□ -1.3
TIF1	YKR059W	RPS7B	P48164	190 aa	Known RBP	6.96	□□□□□ -1.3
TIF1	YKR059W	MDR1	P53258	950 aa		6.96	□□□□□ -1.3
TIF1	YKR059W	HDA1	P53973	706 aa		6.96	□□□□□ -1.3
TIF1	YKR059W	SDH1	Q00711	640 aa		6.96	□□□□□ -1.3
TIF1	YKR059W	SXM1	Q04175	944 aa	Known RBP	6.96	□□□□□ -1.3
TIF1	YKR059W	EMI2	Q04409	500 aa	Known RBP	6.96	□□□□□ -1.3
TIF1	YKR059W	VIP1	Q06685	1146 aa	Known RBP	6.96	□□□□□ -1.3
TIF1	YKR059W	NGL1	Q08213	363 aa	Known RBP	6.96	□□□□□ -1.3
TIF1	YKR059W	DSE3	Q08729	430 aa		6.96	□□□□□ -1.3
TIF1	YKR059W	NUM1	Q00402	2748 aa		6.95	□□□□□ -1.3
TIF1	YKR059W	GFA1	P14742	717 aa	Known RBP	6.95	□□□□□ -1.3
TIF1	YKR059W	ATP12	P22135	325 aa		6.95	□□□□□ -1.3
TIF1	YKR059W	PEX5	P35056	612 aa		6.95	□□□□□ -1.3
TIF1	YKR059W	TVP38	P36164	337 aa		6.95	□□□□□ -1.3
TIF1	YKR059W	DUN1	P39009	513 aa		6.95	□□□□□ -1.3
TIF1	YKR059W	SSP120	P39931	234 aa	Known RBP	6.95	□□□□□ -1.3
TIF1	YKR059W	HFM1	P51979	1187 aa		6.95	□□□□□ -1.3
TIF1	YKR059W	NCE103	P53615	221 aa		6.95	□□□□□ -1.3
TIF1	YKR059W	ORC4	P54791	529 aa		6.95	□□□□□ -1.3
TIF1	YKR059W	SUE1	Q06524	206 aa		6.95	□□□□□ -1.3
TIF1	YKR059W	GRC3	Q07845	632 aa		6.95	□□□□□ -1.3
TIF1	YKR059W	RSC58	Q07979	502 aa		6.95	□□□□□ -1.3
TIF1	YKR059W	YLR149C	Q99296	730 aa		6.95	□□□□□ -1.3
TIF1	YKR059W	FAB1	P34756	2278 aa		6.95	□□□□□ -1.3
TIF1	YKR059W	RIF1	P29539	1916 aa		6.94	□□□□□ -1.3
TIF1	YKR059W	MIS1	P09440	975 aa	Known RBP	6.94	□□□□□ -1.3
TIF1	YKR059W	GLN4	P13188	809 aa	Known RBP	6.94	□□□□□ -1.3
TIF1	YKR059W	YKL050C	P35736	922 aa		6.94	□□□□□ -1.3
TIF1	YKR059W	RRM3	P38766	723 aa		6.94	□□□□□ -1.3
TIF1	YKR059W	SSZ1	P38788	538 aa	Known RBP	6.94	□□□□□ -1.3
TIF1	YKR059W	FMP10	P40098	244 aa		6.94	□□□□□ -1.3
TIF1	YKR059W	YIL108W	P40483	696 aa	Known RBP	6.94	□□□□□ -1.3
TIF1	YKR059W	ART5	P53244	586 aa	Known RBP	6.94	□□□□□ -1.3
TIF1	YKR059W	NOP15	P53927	220 aa	Predicted RBP	6.94	□□□□□ -1.3
TIF1	YKR059W	MOT3	P54785	490 aa	Known RBP	6.94	□□□□□ -1.3
TIF1	YKR059W	GSF2	Q04697	403 aa	Known RBP	6.94	□□□□□ -1.3
TIF1	YKR059W	HPF1	Q05164	967 aa		6.94	□□□□□ -1.3
TIF1	YKR059W	YOR059C	Q08448	450 aa	Known RBP	6.94	□□□□□ -1.3
TIF1	YKR059W	MCH5	Q08777	521 aa		6.94	□□□□□ -1.3
TIF1	YKR059W	THI21	Q08975	551 aa		6.94	□□□□□ -1.3
TIF1	YKR059W	PHO5	P00635	467 aa		6.93	□□□□□ -1.3
TIF1	YKR059W	VAS1	P07806	1104 aa	Known RBP	6.93	□□□□□ -1.3
TIF1	YKR059W	KIN2	P13186	1147 aa	Known RBP	6.93	□□□□□ -1.3
TIF1	YKR059W	PGS1	P25578	521 aa		6.93	□□□□□ -1.3
TIF1	YKR059W	URK1	P27515	501 aa		6.93	□□□□□ -1.3
TIF1	YKR059W	MSS51	P32335	436 aa		6.93	□□□□□ -1.3
TIF1	YKR059W	RPS0A	P32905	252 aa	Known RBP	6.93	□□□□□ -1.3
TIF1	YKR059W	RFC5	P38251	354 aa		6.93	□□□□□ -1.3
TIF1	YKR059W	SLX1	P38324	304 aa		6.93	□□□□□ -1.3
TIF1	YKR059W	RFC1	P38630	861 aa	Known RBP	6.93	□□□□□ -1.3
TIF1	YKR059W	BUD16	P39988	312 aa		6.93	□□□□□ -1.3
TIF1	YKR059W	SCS2	P40075	244 aa	Known RBP	6.93	□□□□□ -1.3
TIF1	YKR059W	OPT1	P40897	799 aa		6.93	□□□□□ -1.3
TIF1	YKR059W	INP52	P50942	1183 aa		6.93	□□□□□ -1.3
TIF1	YKR059W	VID30	P53076	958 aa		6.93	□□□□□ -1.3
TIF1	YKR059W	MTD1	Q02046	320 aa	Known RBP	6.93	□□□□□ -1.3
TIF1	YKR059W	EIS1	Q05050	843 aa	Known RBP	6.93	□□□□□ -1.3
TIF1	YKR059W	CIA1	Q05583	330 aa		6.93	□□□□□ -1.3
TIF1	YKR059W	YCG1	Q06680	1035 aa		6.93	□□□□□ -1.3
TIF1	YKR059W	RCL1	Q08096	367 aa	Predicted RBP	6.93	□□□□□ -1.3
TIF1	YKR059W	HAL9	Q12180	1030 aa		6.93	□□□□□ -1.3
TIF1	YKR059W	PUS1	Q12211	544 aa	Known RBP	6.93	□□□□□ -1.3
TIF1	YKR059W	FKS1	P38631	1876 aa	Known RBP	6.93	□□□□□ -1.3
TIF1	YKR059W	HSF1	P10961	833 aa		6.92	□□□□□ -1.3
TIF1	YKR059W	TPM1	P17536	199 aa	Known RBP	6.92	□□□□□ -1.3
TIF1	YKR059W	FUR1	P18562	216 aa	Known RBP	6.92	□□□□□ -1.3
TIF1	YKR059W	SAN1	P22470	610 aa		6.92	□□□□□ -1.3
TIF1	YKR059W	RAD16	P31244	790 aa		6.92	□□□□□ -1.3
TIF1	YKR059W	NUP120	P35729	1037 aa		6.92	□□□□□ -1.3

Retrieved 100 of 5,963 RNA–protein pairs in 12.6 ms