RNA–Protein interactions for RNA: YIR017C

MET28, Transcript of bZIP transcriptional activator in the Cbf1p-Met4p-Met28p complex, yeastyeast

Gene MET28, Length 564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MET28YIR017C FUI1P38196 639 aa10.03□□□□□ -0.8
MET28YIR017C CKB2P38930 258 aa10.03□□□□□ -0.8
MET28YIR017C YEL028WP39989 153 aa10.03□□□□□ -0.8
MET28YIR017C ALY2P47029 1046 aa10.03□□□□□ -0.8
MET28YIR017C PRP24P49960 444 aaKnown RBP10.03□□□□□ -0.8
MET28YIR017C YDR344CQ05510 147 aa10.03□□□□□ -0.8
MET28YIR017C AAD15Q08361 143 aa10.03□□□□□ -0.8
MET28YIR017C PTC3P34221 468 aaKnown RBP10.02□□□□□ -0.81
MET28YIR017C COY1P34237 679 aa10.02□□□□□ -0.81
MET28YIR017C OTU2P38747 307 aaKnown RBP10.02□□□□□ -0.81
MET28YIR017C MND2P40577 368 aa10.02□□□□□ -0.81
MET28YIR017C NMD5P46970 1048 aa10.02□□□□□ -0.81
MET28YIR017C PCL10P53124 433 aa10.02□□□□□ -0.81
MET28YIR017C SGO1Q08490 590 aa10.02□□□□□ -0.81
MET28YIR017C QCR6P00127 147 aa10.01□□□□□ -0.81
MET28YIR017C PRP9P19736 530 aaKnown RBP10.01□□□□□ -0.81
MET28YIR017C PAT1P25644 796 aaKnown RBP10.01□□□□□ -0.81
MET28YIR017C RPC37P36121 282 aa10.01□□□□□ -0.81
MET28YIR017C LAS1P36146 502 aaPredicted RBP10.01□□□□□ -0.81
MET28YIR017C SPP381P38282 291 aaPredicted RBP10.01□□□□□ -0.81
MET28YIR017C INA22P40576 216 aa10.01□□□□□ -0.81
MET28YIR017C MVP1P40959 511 aaKnown RBP10.01□□□□□ -0.81
MET28YIR017C RPS10BP46784 105 aaKnown RBP10.01□□□□□ -0.81
MET28YIR017C ATG36P46983 293 aa10.01□□□□□ -0.81
MET28YIR017C TAN1P53072 289 aaPredicted RBP10.01□□□□□ -0.81
MET28YIR017C TUB4P53378 473 aa10.01□□□□□ -0.81
MET28YIR017C TRM112P53738 135 aaPredicted RBP10.01□□□□□ -0.81
MET28YIR017C INP2Q03824 705 aa10.01□□□□□ -0.81
MET28YIR017C SEG1Q04279 960 aa10.01□□□□□ -0.81
MET28YIR017C RTN1Q04947 295 aaKnown RBP10.01□□□□□ -0.81
MET28YIR017C YLR012CQ07927 99 aa10.01□□□□□ -0.81
MET28YIR017C RPS10AQ08745 105 aaPredicted RBP10.01□□□□□ -0.81
MET28YIR017C RAD59Q12223 238 aa10.01□□□□□ -0.81
MET28YIR017C YML002WP0CF17 737 aa10□□□□□ -0.81
MET28YIR017C CDC24P11433 854 aaPredicted RBP10□□□□□ -0.81
MET28YIR017C BET2P20133 325 aa10□□□□□ -0.81
MET28YIR017C ADD66P36040 267 aa10□□□□□ -0.81
MET28YIR017C KAP104P38217 918 aaKnown RBP10□□□□□ -0.81
MET28YIR017C SRP68P38687 599 aaKnown RBP10□□□□□ -0.81
MET28YIR017C GGA2P38817 585 aaKnown RBP10□□□□□ -0.81
MET28YIR017C UBP7P40453 1071 aa10□□□□□ -0.81
MET28YIR017C YNL320WP42840 284 aa10□□□□□ -0.81
MET28YIR017C ADI1Q03677 179 aa10□□□□□ -0.81
MET28YIR017C PML39Q03760 334 aa10□□□□□ -0.81
MET28YIR017C CDC73Q06697 393 aa10□□□□□ -0.81
MET28YIR017C NRT1Q08485 598 aa10□□□□□ -0.81
MET28YIR017C YOR387CQ08910 206 aa10□□□□□ -0.81
MET28YIR017C CBC2Q08920 208 aaKnown RBP RIP-Chip data10□□□□□ -0.81not detected
MET28YIR017C ACM1Q08981 209 aa10□□□□□ -0.81
MET28YIR017C AVL9Q12500 764 aa10□□□□□ -0.81
MET28YIR017C AI5_ALPHAQ9ZZX1 630 aa10□□□□□ -0.81
MET28YIR017C YMR084WA2P2R3 262 aa9.99□□□□□ -0.81
MET28YIR017C MIS1P09440 975 aaKnown RBP9.99□□□□□ -0.81
MET28YIR017C IMG2P25642 146 aaPredicted RBP9.99□□□□□ -0.81
MET28YIR017C MGT1P26188 188 aa9.99□□□□□ -0.81
MET28YIR017C MET22P32179 357 aa9.99□□□□□ -0.81
MET28YIR017C PLC1P32383 869 aa9.99□□□□□ -0.81
MET28YIR017C POL12P38121 705 aaPredicted RBP9.99□□□□□ -0.81
MET28YIR017C ROK1P45818 564 aaPredicted RBP9.99□□□□□ -0.81
MET28YIR017C SNG1P46950 547 aa9.99□□□□□ -0.81
MET28YIR017C YPL014WQ02606 381 aa9.99□□□□□ -0.81
MET28YIR017C ENT5Q03769 411 aaKnown RBP9.99□□□□□ -0.81
MET28YIR017C MPC54Q08550 464 aa9.99□□□□□ -0.81
MET28YIR017C PDH1Q12428 516 aaKnown RBP9.99□□□□□ -0.81
MET28YIR017C NOP58Q12499 511 aaKnown RBP9.99□□□□□ -0.81
MET28YIR017C GCR1P07261 785 aa9.98□□□□□ -0.81
MET28YIR017C SIR1P21691 654 aa9.98□□□□□ -0.81
MET28YIR017C MRS6P32864 603 aaKnown RBP9.98□□□□□ -0.81
MET28YIR017C SCC4P40090 624 aa9.98□□□□□ -0.81
MET28YIR017C ATM1P40416 690 aa9.98□□□□□ -0.81
MET28YIR017C IML2P47031 731 aa9.98□□□□□ -0.81
MET28YIR017C RTA1P53047 317 aa9.98□□□□□ -0.81
MET28YIR017C COG6P53959 839 aa9.98□□□□□ -0.81
MET28YIR017C YCS4Q06156 1176 aa9.98□□□□□ -0.81
MET28YIR017C SWC7Q06707 132 aa9.98□□□□□ -0.81
MET28YIR017C HOS1Q12214 470 aa9.98□□□□□ -0.81
MET28YIR017C AFI1Q99222 893 aa9.98□□□□□ -0.81
MET28YIR017C PEP5P12868 1029 aa9.97□□□□□ -0.81
MET28YIR017C SGF29P25554 259 aa9.97□□□□□ -0.81
MET28YIR017C PPZ1P26570 692 aa9.97□□□□□ -0.81
MET28YIR017C GPI10P30777 616 aa9.97□□□□□ -0.81
MET28YIR017C KES1P35844 434 aaKnown RBP9.97□□□□□ -0.81
MET28YIR017C MRPL40P36534 297 aa9.97□□□□□ -0.81
MET28YIR017C PPE1P38796 400 aa9.97□□□□□ -0.81
MET28YIR017C MIC19P43594 170 aa9.97□□□□□ -0.81
MET28YIR017C DLD2P46681 530 aaKnown RBP9.97□□□□□ -0.81
MET28YIR017C RSM26P47141 266 aa9.97□□□□□ -0.81
MET28YIR017C NRD1P53617 575 aaKnown RBP RIP-Chip data9.97□□□□□ -0.81not detected
MET28YIR017C NMA111P53920 997 aa9.97□□□□□ -0.81
MET28YIR017C IMP4P53941 290 aaKnown RBP9.97□□□□□ -0.81
MET28YIR017C YMR206WQ03695 313 aa9.97□□□□□ -0.81
MET28YIR017C MSH6Q03834 1242 aa9.97□□□□□ -0.81
MET28YIR017C TMN2Q04562 672 aa9.97□□□□□ -0.81
MET28YIR017C KEX2P13134 814 aa9.96□□□□□ -0.82
MET28YIR017C AIM26P32858 118 aa9.96□□□□□ -0.82
MET28YIR017C MSR1P38714 643 aa9.96□□□□□ -0.82
MET28YIR017C YAT2P40017 923 aa9.96□□□□□ -0.82
MET28YIR017C GYP8P43570 497 aa9.96□□□□□ -0.82
MET28YIR017C SFB2P53953 876 aa9.96□□□□□ -0.82
MET28YIR017C MAP1Q01662 387 aaKnown RBP RIP-Chip data9.96□□□□□ -0.82not detected
Retrieved 100 of 5,963 RNA–protein pairs in 31.3 ms