RNA–Protein interactions for RNA: YIL076W

SEC28, Transcript of Epsilon-COP subunit of the coatomer, yeast

Gene SEC28, Length 891 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SEC28	YIL076W	TMA17	Q12513	150 aa		5	□□□□□ -1.61
SEC28	YIL076W	GRX4	P32642	244 aa		4.99	□□□□□ -1.61
SEC28	YIL076W	YJR120W	P47157	116 aa		4.99	□□□□□ -1.61
SEC28	YIL076W	BPL1	P48445	690 aa	Predicted RBP	4.99	□□□□□ -1.61
SEC28	YIL076W	BSP1	Q06604	576 aa		4.99	□□□□□ -1.61
SEC28	YIL076W	RTK1	Q12100	620 aa	Predicted RBP	4.99	□□□□□ -1.61
SEC28	YIL076W	URA3	P03962	267 aa		4.98	□□□□□ -1.61
SEC28	YIL076W	HEM12	P32347	362 aa	Predicted RBP	4.98	□□□□□ -1.61
SEC28	YIL076W	CDC5	P32562	705 aa		4.98	□□□□□ -1.61
SEC28	YIL076W	NMD5	P46970	1048 aa		4.98	□□□□□ -1.61
SEC28	YIL076W	RDL1	Q12305	139 aa	Known RBP	4.98	□□□□□ -1.61
SEC28	YIL076W	AHA1	Q12449	350 aa	Known RBP	4.98	□□□□□ -1.61
SEC28	YIL076W	YJU2	P28320	278 aa	Predicted RBP	4.97	□□□□□ -1.61
SEC28	YIL076W	ECM32	P32644	1121 aa	Known RBP	4.97	□□□□□ -1.61
SEC28	YIL076W	SNO3	P43544	222 aa		4.97	□□□□□ -1.61
SEC28	YIL076W	YNL092W	P53934	400 aa		4.97	□□□□□ -1.61
SEC28	YIL076W	ERG13	P54839	491 aa	Known RBP	4.97	□□□□□ -1.61
SEC28	YIL076W	RSC9	Q03124	581 aa		4.97	□□□□□ -1.61
SEC28	YIL076W	PEX15	Q08215	383 aa		4.97	□□□□□ -1.61
SEC28	YIL076W	CRT10	Q08226	957 aa		4.97	□□□□□ -1.61
SEC28	YIL076W	HOS1	Q12214	470 aa		4.97	□□□□□ -1.61
SEC28	YIL076W	YLR111W	Q12528	110 aa		4.97	□□□□□ -1.61
SEC28	YIL076W	GDA1	P32621	518 aa		4.96	□□□□□ -1.62
SEC28	YIL076W	SDH8	P38345	138 aa		4.96	□□□□□ -1.62
SEC28	YIL076W	STB5	P38699	743 aa		4.96	□□□□□ -1.62
SEC28	YIL076W	STL1	P39932	569 aa		4.96	□□□□□ -1.62
SEC28	YIL076W	EMP65	P40085	556 aa		4.96	□□□□□ -1.62
SEC28	YIL076W	MAD2	P40958	196 aa		4.96	□□□□□ -1.62
SEC28	YIL076W	SAE2	P46946	345 aa		4.96	□□□□□ -1.62
SEC28	YIL076W	HOL1	P53389	586 aa		4.96	□□□□□ -1.62
SEC28	YIL076W	YNR071C	P53757	342 aa		4.96	□□□□□ -1.62
SEC28	YIL076W	COG6	P53959	839 aa		4.96	□□□□□ -1.62
SEC28	YIL076W	KAR1	P11927	433 aa		4.95	□□□□□ -1.62
SEC28	YIL076W	CBP3	P21560	335 aa		4.95	□□□□□ -1.62
SEC28	YIL076W	URE2	P23202	354 aa	Known RBP	4.95	□□□□□ -1.62
SEC28	YIL076W	PET309	P32522	965 aa	Predicted RBP	4.95	□□□□□ -1.62
SEC28	YIL076W	COS12	P53053	380 aa		4.95	□□□□□ -1.62
SEC28	YIL076W	MPS1	P54199	764 aa		4.95	□□□□□ -1.62
SEC28	YIL076W	SPN1	Q06505	410 aa	Predicted RBP	4.95	□□□□□ -1.62
SEC28	YIL076W	TSR4	P25040	408 aa		4.94	□□□□□ -1.62
SEC28	YIL076W	ENP1	P38333	483 aa	Known RBP	4.94	□□□□□ -1.62
SEC28	YIL076W	HRD3	Q05787	833 aa		4.94	□□□□□ -1.62
SEC28	YIL076W	CYK3	Q07533	885 aa		4.94	□□□□□ -1.62
SEC28	YIL076W	GEP3	Q08622	556 aa		4.94	□□□□□ -1.62
SEC28	YIL076W	DIN7	Q12086	430 aa		4.94	□□□□□ -1.62
SEC28	YIL076W	YPL071C	Q02864	156 aa		4.93	□□□□□ -1.62
SEC28	YIL076W	YML119W	Q03208	357 aa		4.93	□□□□□ -1.62
SEC28	YIL076W	RAD33	Q04231	177 aa		4.93	□□□□□ -1.62
SEC28	YIL076W	TFC4	P33339	1025 aa		4.92	□□□□□ -1.62
SEC28	YIL076W	YIL092W	P40497	633 aa		4.92	□□□□□ -1.62
SEC28	YIL076W	GSM1	P42950	618 aa		4.92	□□□□□ -1.62
SEC28	YIL076W	IDP3	P53982	420 aa	Known RBP	4.92	□□□□□ -1.62
SEC28	YIL076W	PHM6	Q05637	104 aa		4.92	□□□□□ -1.62
SEC28	YIL076W	TPO3	Q06451	622 aa		4.92	□□□□□ -1.62
SEC28	YIL076W	PSF3	Q12146	194 aa		4.92	□□□□□ -1.62
SEC28	YIL076W	DBP10	Q12389	995 aa	Known RBP	4.92	□□□□□ -1.62
SEC28	YIL076W	BI2	P03873	423 aa		4.91	□□□□□ -1.62
SEC28	YIL076W	PLC1	P32383	869 aa		4.91	□□□□□ -1.62
SEC28	YIL076W	SSP120	P39931	234 aa	Known RBP	4.91	□□□□□ -1.62
SEC28	YIL076W	SLX4	Q12098	748 aa		4.91	□□□□□ -1.62
SEC28	YIL076W	YMR085W	P0CF18	432 aa		4.9	□□□□□ -1.63
SEC28	YIL076W	YAP1	P19880	650 aa	Known RBP	4.9	□□□□□ -1.63
SEC28	YIL076W	AMD2	P22580	549 aa		4.9	□□□□□ -1.63
SEC28	YIL076W	MTG2	P38860	518 aa		4.9	□□□□□ -1.63
SEC28	YIL076W	PEX14	P53112	341 aa		4.9	□□□□□ -1.63
SEC28	YIL076W	COG2	P53271	262 aa		4.9	□□□□□ -1.63
SEC28	YIL076W	CIR2	Q08822	631 aa		4.9	□□□□□ -1.63
SEC28	YIL076W	CRC1	Q12289	327 aa		4.9	□□□□□ -1.63
SEC28	YIL076W	PNO1	Q99216	274 aa	Known RBP	4.9	□□□□□ -1.63
SEC28	YIL076W	RRP43	P25359	394 aa	Predicted RBP	4.89	□□□□□ -1.63
SEC28	YIL076W	IDS2	P46958	469 aa		4.89	□□□□□ -1.63
SEC28	YIL076W	UBP16	Q02863	499 aa		4.89	□□□□□ -1.63
SEC28	YIL076W	Q0010	Q9ZZX9	128 aa		4.89	□□□□□ -1.63
SEC28	YIL076W	CHO2	P05374	869 aa	Known RBP	4.88	□□□□□ -1.63
SEC28	YIL076W	PHO3	P24031	467 aa		4.88	□□□□□ -1.63
SEC28	YIL076W	PAF1	P38351	445 aa		4.88	□□□□□ -1.63
SEC28	YIL076W	MNT3	P40549	630 aa		4.88	□□□□□ -1.63
SEC28	YIL076W	PRP45	P28004	379 aa	Predicted RBP	4.87	□□□□□ -1.63
SEC28	YIL076W	PRE2	P30656	287 aa	Known RBP	4.87	□□□□□ -1.63
SEC28	YIL076W	LNP1	P38878	278 aa		4.87	□□□□□ -1.63
SEC28	YIL076W	RRP8	P38961	392 aa	Known RBP	4.87	□□□□□ -1.63
SEC28	YIL076W	MAM1	P40065	302 aa		4.87	□□□□□ -1.63
SEC28	YIL076W	SCS2	P40075	244 aa	Known RBP	4.87	□□□□□ -1.63
SEC28	YIL076W	LAS21	P40367	830 aa		4.87	□□□□□ -1.63
SEC28	YIL076W	YPL068C	Q02749	293 aa		4.87	□□□□□ -1.63
SEC28	YIL076W	ENT2	Q05785	613 aa		4.87	□□□□□ -1.63
SEC28	YIL076W	NUR1	Q12066	484 aa		4.87	□□□□□ -1.63
SEC28	YIL076W	LCB4	Q12246	624 aa		4.87	□□□□□ -1.63
SEC28	YIL076W	TGL1	P34163	548 aa		4.86	□□□□□ -1.63
SEC28	YIL076W	FTH1	P38310	465 aa		4.86	□□□□□ -1.63
SEC28	YIL076W	ARO9	P38840	513 aa	Predicted RBP	4.86	□□□□□ -1.63
SEC28	YIL076W	VPS8	P39702	1274 aa		4.86	□□□□□ -1.63
SEC28	YIL076W	SAP1	P39955	897 aa	Known RBP	4.86	□□□□□ -1.63
SEC28	YIL076W	JHD1	P40034	492 aa		4.86	□□□□□ -1.63
SEC28	YIL076W	VFA1	P40080	203 aa		4.86	□□□□□ -1.63
SEC28	YIL076W	TRS31	Q03337	283 aa		4.86	□□□□□ -1.63
SEC28	YIL076W	YML053C	Q04978	212 aa		4.86	□□□□□ -1.63
SEC28	YIL076W	YER175W-A	Q8TGU4	54 aa		4.86	□□□□□ -1.63
SEC28	YIL076W	AIM44	Q99299	758 aa		4.86	□□□□□ -1.63
SEC28	YIL076W	RTC1	Q08281	1341 aa		4.86	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 12.2 ms