RNA–Protein interactions for RNA: YFL038C

YPT1, Transcript of Rab family GTPase, yeastyeast

Gene YPT1, Length 621 nt, Biotype protein coding, Subcellular localisation Cellular bud, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YPT1YFL038C SIC1P38634 284 aa6.66□□□□□ -1.34
YPT1YFL038C NMD3P38861 518 aaKnown RBP6.66□□□□□ -1.34
YPT1YFL038C FRT2P39734 528 aa6.66□□□□□ -1.34
YPT1YFL038C LAM5P43560 674 aa6.66□□□□□ -1.34
YPT1YFL038C RRT5P43607 289 aa6.66□□□□□ -1.34
YPT1YFL038C MAD3P47074 515 aa6.66□□□□□ -1.34
YPT1YFL038C PEX31P53203 462 aa6.66□□□□□ -1.34
YPT1YFL038C OSH6Q02201 448 aa6.66□□□□□ -1.34
YPT1YFL038C YPL062WQ02781 134 aa6.66□□□□□ -1.34
YPT1YFL038C MUB1Q03162 620 aa6.66□□□□□ -1.34
YPT1YFL038C TVP15Q03860 143 aa6.66□□□□□ -1.34
YPT1YFL038C HMO1Q03973 246 aaKnown RBP6.66□□□□□ -1.34
YPT1YFL038C YSH1Q06224 779 aaPredicted RBP6.66□□□□□ -1.34
YPT1YFL038C NRT1Q08485 598 aa6.66□□□□□ -1.34
YPT1YFL038C YIG1Q08956 461 aa6.66□□□□□ -1.34
YPT1YFL038C HOS1Q12214 470 aa6.66□□□□□ -1.34
YPT1YFL038C OCA6Q12454 224 aa6.66□□□□□ -1.34
YPT1YFL038C ADE4P04046 510 aaKnown RBP6.65□□□□□ -1.34
YPT1YFL038C MPH2P0CD99 609 aa6.65□□□□□ -1.34
YPT1YFL038C LRE1P25579 583 aaKnown RBP6.65□□□□□ -1.34
YPT1YFL038C GAC1P28006 793 aa6.65□□□□□ -1.34
YPT1YFL038C HRR25P29295 494 aaKnown RBP6.65□□□□□ -1.34
YPT1YFL038C PMI40P29952 429 aaKnown RBP6.65□□□□□ -1.34
YPT1YFL038C RIM1P32445 135 aaKnown RBP6.65□□□□□ -1.34
YPT1YFL038C BEM3P32873 1128 aa6.65□□□□□ -1.34
YPT1YFL038C CYM1P32898 989 aa6.65□□□□□ -1.34
YPT1YFL038C BUD2P33314 1104 aa6.65□□□□□ -1.34
YPT1YFL038C CUE2P36075 443 aaKnown RBP6.65□□□□□ -1.34
YPT1YFL038C APE3P37302 537 aaKnown RBP6.65□□□□□ -1.34
YPT1YFL038C OTU2P38747 307 aaKnown RBP6.65□□□□□ -1.34
YPT1YFL038C YHL008CP38750 627 aa6.65□□□□□ -1.34
YPT1YFL038C YDR089WP38966 869 aa6.65□□□□□ -1.34
YPT1YFL038C YJL206CP39529 758 aa6.65□□□□□ -1.34
YPT1YFL038C DPH1P40487 425 aaKnown RBP6.65□□□□□ -1.34
YPT1YFL038C SEC26P41810 973 aaKnown RBP6.65□□□□□ -1.34
YPT1YFL038C TAF1P46677 1066 aa6.65□□□□□ -1.34
YPT1YFL038C MNN11P46985 422 aaKnown RBP6.65□□□□□ -1.34
YPT1YFL038C CCT8P47079 568 aaKnown RBP6.65□□□□□ -1.34
YPT1YFL038C COS6P53344 381 aa6.65□□□□□ -1.34
YPT1YFL038C VPS9P54787 451 aa6.65□□□□□ -1.34
YPT1YFL038C MUK1Q02866 612 aa6.65□□□□□ -1.34
YPT1YFL038C ATP25Q03153 612 aa6.65□□□□□ -1.34
YPT1YFL038C PRP3Q03338 469 aaPredicted RBP6.65□□□□□ -1.34
YPT1YFL038C ACL4Q03771 387 aa6.65□□□□□ -1.34
YPT1YFL038C YMR160WQ03823 816 aa6.65□□□□□ -1.34
YPT1YFL038C CST9Q06032 482 aa6.65□□□□□ -1.34
YPT1YFL038C SNX3Q08826 162 aaKnown RBP6.65□□□□□ -1.34
YPT1YFL038C RGS2Q99188 309 aa6.65□□□□□ -1.34
YPT1YFL038C RIF1P29539 1916 aa6.64□□□□□ -1.35
YPT1YFL038C TPK1P06244 397 aa6.64□□□□□ -1.35
YPT1YFL038C GCY1P14065 312 aaKnown RBP RIP-Chip data6.64□□□□□ -1.35not detected
YPT1YFL038C RAD14P28519 371 aa6.64□□□□□ -1.35
YPT1YFL038C SRP101P32916 621 aa6.64□□□□□ -1.35
YPT1YFL038C PEX5P35056 612 aa6.64□□□□□ -1.35
YPT1YFL038C NUP120P35729 1037 aa6.64□□□□□ -1.35
YPT1YFL038C RRP14P36080 434 aaKnown RBP6.64□□□□□ -1.35
YPT1YFL038C SHE3P38272 425 aaKnown RBP6.64□□□□□ -1.35
YPT1YFL038C BIT2P38346 545 aa6.64□□□□□ -1.35
YPT1YFL038C STL1P39932 569 aa6.64□□□□□ -1.35
YPT1YFL038C YAT2P40017 923 aa6.64□□□□□ -1.35
YPT1YFL038C YFL012WP43580 148 aa6.64□□□□□ -1.35
YPT1YFL038C HST2P53686 357 aa6.64□□□□□ -1.35
YPT1YFL038C IST1P53843 298 aaPredicted RBP6.64□□□□□ -1.35
YPT1YFL038C NOP15P53927 220 aaPredicted RBP6.64□□□□□ -1.35
YPT1YFL038C YMR209CQ03648 457 aa6.64□□□□□ -1.35
YPT1YFL038C SKY1Q03656 742 aa6.64□□□□□ -1.35
YPT1YFL038C TAF11Q04226 346 aa6.64□□□□□ -1.35
YPT1YFL038C DNL4Q08387 944 aaPredicted RBP6.64□□□□□ -1.35
YPT1YFL038C CBC2Q08920 208 aaKnown RBP RIP-Chip data6.64□□□□□ -1.35not detected
YPT1YFL038C YPR202WQ08993 238 aa6.64□□□□□ -1.35
YPT1YFL038C SPE3Q12074 293 aaKnown RBP6.64□□□□□ -1.35
YPT1YFL038C YEL077CQ3E7X8 1277 aa6.64□□□□□ -1.35
YPT1YFL038C MSD1P15179 658 aaKnown RBP6.63□□□□□ -1.35
YPT1YFL038C VPS3P23643 1011 aa6.63□□□□□ -1.35
YPT1YFL038C DBP1P24784 617 aaKnown RBP6.63□□□□□ -1.35
YPT1YFL038C MSH2P25847 964 aa6.63□□□□□ -1.35
YPT1YFL038C SMI1P32566 505 aa6.63□□□□□ -1.35
YPT1YFL038C UTR2P32623 467 aa6.63□□□□□ -1.35
YPT1YFL038C YBR053CP38235 358 aa6.63□□□□□ -1.35
YPT1YFL038C UBX7P38349 436 aa6.63□□□□□ -1.35
YPT1YFL038C PHO89P38361 574 aa6.63□□□□□ -1.35
YPT1YFL038C PPE1P38796 400 aa6.63□□□□□ -1.35
YPT1YFL038C CRP1P38845 465 aaKnown RBP6.63□□□□□ -1.35
YPT1YFL038C GVP36P40531 326 aaKnown RBP6.63□□□□□ -1.35
YPT1YFL038C CHS6P40955 746 aa6.63□□□□□ -1.35
YPT1YFL038C SUM1P46676 1062 aa6.63□□□□□ -1.35
YPT1YFL038C VTC4P47075 721 aa6.63□□□□□ -1.35
YPT1YFL038C PEX21P50091 288 aa6.63□□□□□ -1.35
YPT1YFL038C STB4P50104 949 aa6.63□□□□□ -1.35
YPT1YFL038C ARI1P53111 347 aaKnown RBP6.63□□□□□ -1.35
YPT1YFL038C YGR127WP53275 312 aa6.63□□□□□ -1.35
YPT1YFL038C YNL134CP53912 376 aaKnown RBP6.63□□□□□ -1.35
YPT1YFL038C CDC123Q05791 360 aa6.63□□□□□ -1.35
YPT1YFL038C RSC2Q06488 889 aa6.63□□□□□ -1.35
YPT1YFL038C MEU1Q07938 337 aaKnown RBP RIP-Chip data6.63□□□□□ -1.35not detected
YPT1YFL038C RCL1Q08096 367 aaPredicted RBP6.63□□□□□ -1.35
YPT1YFL038C PEX15Q08215 383 aa6.63□□□□□ -1.35
YPT1YFL038C TMA46Q12000 345 aaKnown RBP6.63□□□□□ -1.35
YPT1YFL038C EFG1Q3E705 233 aaKnown RBP6.63□□□□□ -1.35
YPT1YFL038C PAB1P04147 577 aaKnown RBP RIP-Chip data6.62□□□□□ -1.35 RIP-Chip
Retrieved 100 of 5,963 RNA–protein pairs in 58 ms