RNA–Protein interactions for RNA: YDR425W

SNX41, Transcript of Sorting nexin, yeastyeast

Gene SNX41, Length 1,878 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNX41YDR425W CCL1P37366 393 aa2.87□□□□□ -1.95
SNX41YDR425W YEL076CP39971 216 aa2.87□□□□□ -1.95
SNX41YDR425W LTP1P40347 161 aa2.87□□□□□ -1.95
SNX41YDR425W BNA3P47039 444 aaKnown RBP2.87□□□□□ -1.95
SNX41YDR425W SAP4P53036 818 aa2.87□□□□□ -1.95
SNX41YDR425W MTD1Q02046 320 aaKnown RBP2.87□□□□□ -1.95
SNX41YDR425W PDS5Q04264 1277 aa2.87□□□□□ -1.95
SNX41YDR425W TRE2Q08693 809 aa2.87□□□□□ -1.95
SNX41YDR425W QCR6P00127 147 aa2.86□□□□□ -1.95
SNX41YDR425W HOT13P36078 116 aa2.86□□□□□ -1.95
SNX41YDR425W RIM4P38741 713 aa2.86□□□□□ -1.95
SNX41YDR425W TAX4P47030 604 aa2.86□□□□□ -1.95
SNX41YDR425W MNT2P53059 558 aa2.86□□□□□ -1.95
SNX41YDR425W COG6P53959 839 aa2.86□□□□□ -1.95
SNX41YDR425W CDC45Q08032 650 aa2.86□□□□□ -1.95
SNX41YDR425W YOR378WQ08902 515 aa2.86□□□□□ -1.95
SNX41YDR425W TGS1Q12052 315 aa2.86□□□□□ -1.95
SNX41YDR425W RKR1Q04781 1562 aa2.86□□□□□ -1.95
SNX41YDR425W KOG1P38873 1557 aa2.86□□□□□ -1.95
SNX41YDR425W YMR084WA2P2R3 262 aa2.86□□□□□ -1.95
SNX41YDR425W PRP45P28004 379 aaPredicted RBP2.86□□□□□ -1.95
SNX41YDR425W HEM12P32347 362 aaPredicted RBP2.86□□□□□ -1.95
SNX41YDR425W EMP65P40085 556 aa2.86□□□□□ -1.95
SNX41YDR425W PEA2P40091 420 aa2.86□□□□□ -1.95
SNX41YDR425W SLD3P53135 668 aa2.86□□□□□ -1.95
SNX41YDR425W SQS1P53866 767 aaKnown RBP2.86□□□□□ -1.95
SNX41YDR425W AI5_ALPHAQ9ZZX1 630 aa2.86□□□□□ -1.95
SNX41YDR425W ERG11P10614 530 aa2.85□□□□□ -1.95
SNX41YDR425W PCT1P13259 424 aa2.85□□□□□ -1.95
SNX41YDR425W COX11P19516 300 aaKnown RBP2.85□□□□□ -1.95
SNX41YDR425W VPS27P40343 622 aaKnown RBP2.85□□□□□ -1.95
SNX41YDR425W SNM1P40993 198 aa2.85□□□□□ -1.95
SNX41YDR425W SPC105P53148 917 aa2.85□□□□□ -1.95
SNX41YDR425W CWC22P53333 577 aaKnown RBP2.85□□□□□ -1.95
SNX41YDR425W TMA17Q12513 150 aa2.85□□□□□ -1.95
SNX41YDR425W MMS1Q06211 1407 aa2.85□□□□□ -1.95
SNX41YDR425W NUP159P40477 1460 aa2.84□□□□□ -1.95
SNX41YDR425W PDR15Q04182 1529 aaKnown RBP2.84□□□□□ -1.95
SNX41YDR425W AAC1P04710 309 aa2.84□□□□□ -1.95
SNX41YDR425W APN1P22936 367 aa2.84□□□□□ -1.95
SNX41YDR425W DSS4P32601 143 aa2.84□□□□□ -1.95
SNX41YDR425W SSP120P39931 234 aaKnown RBP2.84□□□□□ -1.95
SNX41YDR425W MAD2P40958 196 aa2.84□□□□□ -1.95
SNX41YDR425W TDA10P42938 290 aa2.84□□□□□ -1.95
SNX41YDR425W YFL015CP43578 164 aa2.84□□□□□ -1.95
SNX41YDR425W YRB30P53107 440 aaPredicted RBP2.84□□□□□ -1.95
SNX41YDR425W GFD1Q04839 188 aaKnown RBP2.84□□□□□ -1.95
SNX41YDR425W PEX15Q08215 383 aa2.84□□□□□ -1.95
SNX41YDR425W RNR3P21672 869 aaKnown RBP2.84□□□□□ -1.96
SNX41YDR425W GSY2P27472 705 aa2.84□□□□□ -1.96
SNX41YDR425W MSP1P28737 362 aa2.84□□□□□ -1.96
SNX41YDR425W RPC34P32910 317 aa2.84□□□□□ -1.96
SNX41YDR425W EAF5P39995 279 aa2.84□□□□□ -1.96
SNX41YDR425W PUS4P48567 403 aaKnown RBP2.84□□□□□ -1.96
SNX41YDR425W MRN1Q08925 612 aaKnown RBP RIP-Chip data2.84□□□□□ -1.96not detected
SNX41YDR425W AFT2Q08957 416 aa2.84□□□□□ -1.96
SNX41YDR425W CWC2Q12046 339 aaPredicted RBP2.84□□□□□ -1.96
SNX41YDR425W DIN7Q12086 430 aa2.84□□□□□ -1.96
SNX41YDR425W SLX4Q12098 748 aa2.84□□□□□ -1.96
SNX41YDR425W NOP58Q12499 511 aaKnown RBP2.84□□□□□ -1.96
SNX41YDR425W MLP2P40457 1679 aa2.83□□□□□ -1.96
SNX41YDR425W RPP0P05317 312 aaKnown RBP2.83□□□□□ -1.96
SNX41YDR425W HEM1P09950 548 aaPredicted RBP2.83□□□□□ -1.96
SNX41YDR425W SEC12P11655 471 aa2.83□□□□□ -1.96
SNX41YDR425W CBP3P21560 335 aa2.83□□□□□ -1.96
SNX41YDR425W ARG1P22768 420 aa2.83□□□□□ -1.96
SNX41YDR425W MRC1P25588 1096 aa2.83□□□□□ -1.96
SNX41YDR425W VPS24P36095 224 aaKnown RBP2.83□□□□□ -1.96
SNX41YDR425W EXO1P39875 702 aa2.83□□□□□ -1.96
SNX41YDR425W STL1P39932 569 aa2.83□□□□□ -1.96
SNX41YDR425W OPT1P40897 799 aa2.83□□□□□ -1.96
SNX41YDR425W ATG36P46983 293 aa2.83□□□□□ -1.96
SNX41YDR425W YJR120WP47157 116 aa2.83□□□□□ -1.96
SNX41YDR425W HOL1P53389 586 aa2.83□□□□□ -1.96
SNX41YDR425W YNR071CP53757 342 aa2.83□□□□□ -1.96
SNX41YDR425W RTK1Q12100 620 aaPredicted RBP2.83□□□□□ -1.96
SNX41YDR425W RPO31P04051 1460 aa2.83□□□□□ -1.96
SNX41YDR425W TY3B-GQ99315 1547 aa2.83□□□□□ -1.96
SNX41YDR425W AQY1P0CD91 305 aa2.82□□□□□ -1.96
SNX41YDR425W CDC5P32562 705 aa2.82□□□□□ -1.96
SNX41YDR425W APD1P38281 316 aa2.82□□□□□ -1.96
SNX41YDR425W RAD26P40352 1085 aa2.82□□□□□ -1.96
SNX41YDR425W BST1P43571 1029 aa2.82□□□□□ -1.96
SNX41YDR425W YNL092WP53934 400 aa2.82□□□□□ -1.96
SNX41YDR425W ECM38Q05902 660 aaPredicted RBP2.82□□□□□ -1.96
SNX41YDR425W IRC3Q06683 689 aa2.82□□□□□ -1.96
SNX41YDR425W YDL144CQ07589 356 aa2.82□□□□□ -1.96
SNX41YDR425W PCL8Q08966 492 aa2.82□□□□□ -1.96
SNX41YDR425W ICT1Q12385 394 aa2.82□□□□□ -1.96
SNX41YDR425W PCK1P10963 549 aa2.82□□□□□ -1.96
SNX41YDR425W SUI2P20459 304 aaKnown RBP2.82□□□□□ -1.96
SNX41YDR425W YJU2P28320 278 aaPredicted RBP2.82□□□□□ -1.96
SNX41YDR425W PLC1P32383 869 aa2.82□□□□□ -1.96
SNX41YDR425W PET309P32522 965 aaPredicted RBP2.82□□□□□ -1.96
SNX41YDR425W SDH8P38345 138 aa2.82□□□□□ -1.96
SNX41YDR425W ULP2P40537 1034 aaPredicted RBP2.82□□□□□ -1.96
SNX41YDR425W RPS0BP46654 252 aaKnown RBP2.82□□□□□ -1.96
SNX41YDR425W SPN1Q06505 410 aaPredicted RBP2.82□□□□□ -1.96
SNX41YDR425W FRE7Q12333 620 aa2.82□□□□□ -1.96
SNX41YDR425W GEA2P39993 1459 aaKnown RBP2.81□□□□□ -1.96
Retrieved 100 of 5,963 RNA–protein pairs in 86.5 ms