RNA–Protein interactions for RNA: YDR392W

SPT3, Transcript of Subunit of the SAGA and SAGA-like transcriptional regulatory complexes, yeastyeast

Gene SPT3, Length 1,014 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPT3YDR392W CIN8P27895 1000 aa5.35□□□□□ -1.55
SPT3YDR392W PEP7P32609 515 aa5.35□□□□□ -1.55
SPT3YDR392W SAK1P38990 1142 aa5.35□□□□□ -1.55
SPT3YDR392W GTF1P53260 183 aaPredicted RBP5.35□□□□□ -1.55
SPT3YDR392W TPO2P53283 614 aa5.35□□□□□ -1.55
SPT3YDR392W SPC98P53540 846 aa5.35□□□□□ -1.55
SPT3YDR392W SWS2P53937 143 aa5.35□□□□□ -1.55
SPT3YDR392W EEB1Q02891 456 aa5.35□□□□□ -1.55
SPT3YDR392W PDS5Q04264 1277 aa5.35□□□□□ -1.55
SPT3YDR392W YFT2Q06676 274 aa5.35□□□□□ -1.55
SPT3YDR392W CDA1Q06702 301 aa5.35□□□□□ -1.55
SPT3YDR392W NOP12Q08208 459 aaKnown RBP5.35□□□□□ -1.55
SPT3YDR392W YOL073CQ08232 322 aa5.35□□□□□ -1.55
SPT3YDR392W NDJ1Q12366 352 aa5.35□□□□□ -1.55
SPT3YDR392W GEM1P39722 662 aa5.34□□□□□ -1.55
SPT3YDR392W EAF5P39995 279 aa5.34□□□□□ -1.55
SPT3YDR392W SIP5P40210 489 aaKnown RBP5.34□□□□□ -1.55
SPT3YDR392W MPH1P40562 993 aa5.34□□□□□ -1.55
SPT3YDR392W VPS25P47142 202 aa5.34□□□□□ -1.55
SPT3YDR392W ENP2P48234 707 aaKnown RBP5.34□□□□□ -1.55
SPT3YDR392W SEC5P89102 971 aa5.34□□□□□ -1.55
SPT3YDR392W TRM82Q03774 444 aa5.34□□□□□ -1.55
SPT3YDR392W YDR341CQ05506 607 aaKnown RBP5.34□□□□□ -1.55
SPT3YDR392W CRD1Q07560 283 aa5.34□□□□□ -1.55
SPT3YDR392W HMI1Q12039 706 aa5.34□□□□□ -1.55
SPT3YDR392W CLF1Q12309 687 aaPredicted RBP5.34□□□□□ -1.55
SPT3YDR392W RAD50P12753 1312 aa5.33□□□□□ -1.56
SPT3YDR392W EMC1P25574 760 aa5.33□□□□□ -1.56
SPT3YDR392W DCG1P32460 244 aa5.33□□□□□ -1.56
SPT3YDR392W TMT1P32643 299 aa5.33□□□□□ -1.56
SPT3YDR392W ATG19P35193 415 aa5.33□□□□□ -1.56
SPT3YDR392W LSM4P40070 187 aaKnown RBP5.33□□□□□ -1.56
SPT3YDR392W COQ6P53318 479 aa5.33□□□□□ -1.56
SPT3YDR392W YAP6Q03935 383 aa5.33□□□□□ -1.56
SPT3YDR392W ACM1Q08981 209 aa5.33□□□□□ -1.56
SPT3YDR392W GNT1Q12096 491 aa5.33□□□□□ -1.56
SPT3YDR392W MET6P05694 767 aaKnown RBP5.32□□□□□ -1.56
SPT3YDR392W RPL8BP29453 256 aaKnown RBP5.32□□□□□ -1.56
SPT3YDR392W DSN1P40568 576 aa5.32□□□□□ -1.56
SPT3YDR392W AIM23P47015 356 aa5.32□□□□□ -1.56
SPT3YDR392W SLI1P53304 468 aa5.32□□□□□ -1.56
SPT3YDR392W HER2Q03557 464 aa5.32□□□□□ -1.56
SPT3YDR392W RTT109Q07794 436 aa5.32□□□□□ -1.56
SPT3YDR392W RPL11AP0C0W9 174 aaKnown RBP5.31□□□□□ -1.56
SPT3YDR392W CYS3P31373 394 aaKnown RBP5.31□□□□□ -1.56
SPT3YDR392W SEF1P34228 1148 aa5.31□□□□□ -1.56
SPT3YDR392W RER2P35196 286 aa5.31□□□□□ -1.56
SPT3YDR392W FAU1P40099 211 aa5.31□□□□□ -1.56
SPT3YDR392W VTC2P43585 828 aa5.31□□□□□ -1.56
SPT3YDR392W PHO23P50947 330 aa5.31□□□□□ -1.56
SPT3YDR392W TOF2Q02208 771 aa5.31□□□□□ -1.56
SPT3YDR392W YML096WQ04489 525 aa5.31□□□□□ -1.56
SPT3YDR392W TMA46Q12000 345 aaKnown RBP5.31□□□□□ -1.56
SPT3YDR392W SKM1Q12469 655 aa5.31□□□□□ -1.56
SPT3YDR392W RPL11BQ3E757 174 aaPredicted RBP5.31□□□□□ -1.56
SPT3YDR392W RPP2AP05319 106 aaKnown RBP5.3□□□□□ -1.56
SPT3YDR392W RPL8AP17076 256 aaKnown RBP5.3□□□□□ -1.56
SPT3YDR392W RRP8P38961 392 aaKnown RBP5.3□□□□□ -1.56
SPT3YDR392W FYV10P40492 516 aa5.3□□□□□ -1.56
SPT3YDR392W GAT1P43574 510 aa5.3□□□□□ -1.56
SPT3YDR392W TIF35Q04067 274 aaKnown RBP5.3□□□□□ -1.56
SPT3YDR392W VID22Q05934 901 aa5.3□□□□□ -1.56
SPT3YDR392W YDL057WQ07379 328 aa5.3□□□□□ -1.56
SPT3YDR392W RTT10Q08924 1013 aa5.3□□□□□ -1.56
SPT3YDR392W ABF1P14164 731 aa5.29□□□□□ -1.56
SPT3YDR392W RIT1P23796 513 aa5.29□□□□□ -1.56
SPT3YDR392W DEF1P35732 738 aaKnown RBP5.29□□□□□ -1.56
SPT3YDR392W MCM7P38132 845 aa5.29□□□□□ -1.56
SPT3YDR392W PLB1P39105 664 aa5.29□□□□□ -1.56
SPT3YDR392W YMR147WP40218 223 aaKnown RBP5.29□□□□□ -1.56
SPT3YDR392W TPM2P40414 161 aa5.29□□□□□ -1.56
SPT3YDR392W YIL161WP40449 235 aaKnown RBP5.29□□□□□ -1.56
SPT3YDR392W SRP1Q02821 542 aaKnown RBP5.29□□□□□ -1.56
SPT3YDR392W VHS1Q03785 461 aa5.29□□□□□ -1.56
SPT3YDR392W YDR338CQ05497 695 aa5.29□□□□□ -1.56
SPT3YDR392W PGA3Q12746 312 aaKnown RBP5.29□□□□□ -1.56
SPT3YDR392W PGK1P00560 416 aaKnown RBP5.28□□□□□ -1.56
SPT3YDR392W GAL80P04387 435 aa5.28□□□□□ -1.56
SPT3YDR392W CDC9P04819 755 aa5.28□□□□□ -1.56
SPT3YDR392W PRP22P24384 1145 aaKnown RBP5.28□□□□□ -1.56
SPT3YDR392W CWP1P28319 239 aa5.28□□□□□ -1.56
SPT3YDR392W MCM2P29469 868 aa5.28□□□□□ -1.56
SPT3YDR392W STE13P33894 931 aa5.28□□□□□ -1.56
SPT3YDR392W UBP11P36026 717 aa5.28□□□□□ -1.56
SPT3YDR392W YKR051WP36142 418 aa5.28□□□□□ -1.56
SPT3YDR392W MRPL40P36534 297 aa5.28□□□□□ -1.56
SPT3YDR392W MND2P40577 368 aa5.28□□□□□ -1.56
SPT3YDR392W MET12P46151 657 aa5.28□□□□□ -1.56
SPT3YDR392W PMT3P47190 753 aa5.28□□□□□ -1.56
SPT3YDR392W PEX14P53112 341 aa5.28□□□□□ -1.56
SPT3YDR392W NPY1P53164 384 aa5.28□□□□□ -1.56
SPT3YDR392W GLO2Q05584 274 aa5.28□□□□□ -1.56
SPT3YDR392W COQ9Q05779 260 aa5.28□□□□□ -1.56
SPT3YDR392W TPO1Q07824 586 aa5.28□□□□□ -1.56
SPT3YDR392W OPI10Q08202 246 aa5.28□□□□□ -1.56
SPT3YDR392W SMC5Q08204 1093 aa5.28□□□□□ -1.56
SPT3YDR392W RVB2Q12464 471 aaKnown RBP5.28□□□□□ -1.56
SPT3YDR392W ARP6Q12509 438 aa5.28□□□□□ -1.56
SPT3YDR392W COX4P04037 155 aa5.27□□□□□ -1.57
SPT3YDR392W SLA2P33338 968 aa5.27□□□□□ -1.57
Retrieved 100 of 5,963 RNA–protein pairs in 30.6 ms