RNA–Protein interactions for RNA: YDR313C

PIB1, Transcript of RING-type ubiquitin ligase of the endosomal and vacuolar membranes, yeast

Gene PIB1, Length 861 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PIB1	YDR313C	BEM3	P32873	1128 aa		4.99	□□□□□ -1.61
PIB1	YDR313C	YJL043W	P47053	257 aa		4.99	□□□□□ -1.61
PIB1	YDR313C	SPN1	Q06505	410 aa	Predicted RBP	4.99	□□□□□ -1.61
PIB1	YDR313C	HOS1	Q12214	470 aa		4.99	□□□□□ -1.61
PIB1	YDR313C	RDL1	Q12305	139 aa	Known RBP	4.99	□□□□□ -1.61
PIB1	YDR313C	CDC5	P32562	705 aa		4.98	□□□□□ -1.61
PIB1	YDR313C	SDH8	P38345	138 aa		4.98	□□□□□ -1.61
PIB1	YDR313C	SNO3	P43544	222 aa		4.98	□□□□□ -1.61
PIB1	YDR313C	NMD5	P46970	1048 aa		4.98	□□□□□ -1.61
PIB1	YDR313C	BPL1	P48445	690 aa	Predicted RBP	4.98	□□□□□ -1.61
PIB1	YDR313C	BSP1	Q06604	576 aa		4.98	□□□□□ -1.61
PIB1	YDR313C	TMA17	Q12513	150 aa		4.98	□□□□□ -1.61
PIB1	YDR313C	PET309	P32522	965 aa	Predicted RBP	4.97	□□□□□ -1.61
PIB1	YDR313C	YNL058C	P53947	316 aa		4.97	□□□□□ -1.61
PIB1	YDR313C	SLX4	Q12098	748 aa		4.97	□□□□□ -1.61
PIB1	YDR313C	KAR1	P11927	433 aa		4.96	□□□□□ -1.62
PIB1	YDR313C	ARG1	P22768	420 aa		4.96	□□□□□ -1.62
PIB1	YDR313C	MRC1	P25588	1096 aa		4.96	□□□□□ -1.62
PIB1	YDR313C	MAD2	P40958	196 aa		4.96	□□□□□ -1.62
PIB1	YDR313C	COG6	P53959	839 aa		4.96	□□□□□ -1.62
PIB1	YDR313C	ERG13	P54839	491 aa	Known RBP	4.96	□□□□□ -1.62
PIB1	YDR313C	TRI1	Q05024	226 aa		4.96	□□□□□ -1.62
PIB1	YDR313C	PSF3	Q12146	194 aa		4.96	□□□□□ -1.62
PIB1	YDR313C	URA3	P03962	267 aa		4.95	□□□□□ -1.62
PIB1	YDR313C	YPK1	P12688	680 aa	Known RBP	4.95	□□□□□ -1.62
PIB1	YDR313C	EAF5	P39995	279 aa		4.95	□□□□□ -1.62
PIB1	YDR313C	LAS21	P40367	830 aa		4.95	□□□□□ -1.62
PIB1	YDR313C	YIL092W	P40497	633 aa		4.95	□□□□□ -1.62
PIB1	YDR313C	BST1	P43571	1029 aa		4.95	□□□□□ -1.62
PIB1	YDR313C	GAT1	P43574	510 aa		4.95	□□□□□ -1.62
PIB1	YDR313C	YNR071C	P53757	342 aa		4.95	□□□□□ -1.62
PIB1	YDR313C	STP1	Q00947	519 aa		4.95	□□□□□ -1.62
PIB1	YDR313C	MRN1	Q08925	612 aa	Known RBP RIP-Chip data	4.95	□□□□□ -1.62	not detected
PIB1	YDR313C	PCL8	Q08966	492 aa		4.95	□□□□□ -1.62
PIB1	YDR313C	RGT2	Q12300	763 aa		4.95	□□□□□ -1.62
PIB1	YDR313C	AHA1	Q12449	350 aa	Known RBP	4.95	□□□□□ -1.62
PIB1	YDR313C	YJU2	P28320	278 aa	Predicted RBP	4.94	□□□□□ -1.62
PIB1	YDR313C	TAF5	P38129	798 aa		4.94	□□□□□ -1.62
PIB1	YDR313C	DIN7	Q12086	430 aa		4.94	□□□□□ -1.62
PIB1	YDR313C	RTK1	Q12100	620 aa	Predicted RBP	4.94	□□□□□ -1.62
PIB1	YDR313C	SEC3	P33332	1336 aa	Known RBP	4.94	□□□□□ -1.62
PIB1	YDR313C	BI2	P03873	423 aa		4.93	□□□□□ -1.62
PIB1	YDR313C	MAM1	P40065	302 aa		4.93	□□□□□ -1.62
PIB1	YDR313C	GSM1	P42950	618 aa		4.93	□□□□□ -1.62
PIB1	YDR313C	SAE2	P46946	345 aa		4.93	□□□□□ -1.62
PIB1	YDR313C	PUS4	P48567	403 aa	Known RBP	4.93	□□□□□ -1.62
PIB1	YDR313C	COS12	P53053	380 aa		4.93	□□□□□ -1.62
PIB1	YDR313C	IDP3	P53982	420 aa	Known RBP	4.93	□□□□□ -1.62
PIB1	YDR313C	PHM6	Q05637	104 aa		4.93	□□□□□ -1.62
PIB1	YDR313C	HRD3	Q05787	833 aa		4.93	□□□□□ -1.62
PIB1	YDR313C	FRE7	Q12333	620 aa		4.93	□□□□□ -1.62
PIB1	YDR313C	CHO2	P05374	869 aa	Known RBP	4.92	□□□□□ -1.62
PIB1	YDR313C	CIR1	P42940	261 aa		4.92	□□□□□ -1.62
PIB1	YDR313C	YNL092W	P53934	400 aa		4.92	□□□□□ -1.62
PIB1	YDR313C	ECM38	Q05902	660 aa	Predicted RBP	4.92	□□□□□ -1.62
PIB1	YDR313C	YLR111W	Q12528	110 aa		4.92	□□□□□ -1.62
PIB1	YDR313C	KGD2	P19262	463 aa	Predicted RBP	4.91	□□□□□ -1.62
PIB1	YDR313C	URE2	P23202	354 aa	Known RBP	4.91	□□□□□ -1.62
PIB1	YDR313C	YJR120W	P47157	116 aa		4.91	□□□□□ -1.62
PIB1	YDR313C	PEX14	P53112	341 aa		4.91	□□□□□ -1.62
PIB1	YDR313C	PLC1	P32383	869 aa		4.9	□□□□□ -1.63
PIB1	YDR313C	SDS22	P36047	338 aa		4.9	□□□□□ -1.63
PIB1	YDR313C	ENP1	P38333	483 aa	Known RBP	4.9	□□□□□ -1.63
PIB1	YDR313C	YLF2	P38746	405 aa		4.9	□□□□□ -1.63
PIB1	YDR313C	SPC97	P38863	823 aa		4.9	□□□□□ -1.63
PIB1	YDR313C	IDS2	P46958	469 aa		4.9	□□□□□ -1.63
PIB1	YDR313C	COG2	P53271	262 aa		4.9	□□□□□ -1.63
PIB1	YDR313C	MPS1	P54199	764 aa		4.9	□□□□□ -1.63
PIB1	YDR313C	RSC9	Q03124	581 aa		4.9	□□□□□ -1.63
PIB1	YDR313C	RAD33	Q04231	177 aa		4.9	□□□□□ -1.63
PIB1	YDR313C	CET1	O13297	549 aa	Predicted RBP	4.89	□□□□□ -1.63
PIB1	YDR313C	ECM32	P32644	1121 aa	Known RBP	4.89	□□□□□ -1.63
PIB1	YDR313C	TGL1	P34163	548 aa		4.89	□□□□□ -1.63
PIB1	YDR313C	CNM67	P53865	581 aa	Known RBP	4.89	□□□□□ -1.63
PIB1	YDR313C	TPO3	Q06451	622 aa		4.89	□□□□□ -1.63
PIB1	YDR313C	CYK3	Q07533	885 aa		4.89	□□□□□ -1.63
PIB1	YDR313C	DBP10	Q12389	995 aa	Known RBP	4.89	□□□□□ -1.63
PIB1	YDR313C	PHO3	P24031	467 aa		4.88	□□□□□ -1.63
PIB1	YDR313C	YCR061W	P25639	631 aa		4.88	□□□□□ -1.63
PIB1	YDR313C	GDA1	P32621	518 aa		4.88	□□□□□ -1.63
PIB1	YDR313C	TFC4	P33339	1025 aa		4.88	□□□□□ -1.63
PIB1	YDR313C	VFA1	P40080	203 aa		4.88	□□□□□ -1.63
PIB1	YDR313C	MNT3	P40549	630 aa		4.88	□□□□□ -1.63
PIB1	YDR313C	NOP2	P40991	618 aa	Known RBP	4.88	□□□□□ -1.63
PIB1	YDR313C	PRS5	Q12265	496 aa	Known RBP	4.88	□□□□□ -1.63
PIB1	YDR313C	VAS1	P07806	1104 aa	Known RBP	4.87	□□□□□ -1.63
PIB1	YDR313C	LNP1	P38878	278 aa		4.87	□□□□□ -1.63
PIB1	YDR313C	SAW1	P39735	261 aa		4.87	□□□□□ -1.63
PIB1	YDR313C	JHD1	P40034	492 aa		4.87	□□□□□ -1.63
PIB1	YDR313C	YPL068C	Q02749	293 aa		4.87	□□□□□ -1.63
PIB1	YDR313C	YPL071C	Q02864	156 aa		4.87	□□□□□ -1.63
PIB1	YDR313C	TRS31	Q03337	283 aa		4.87	□□□□□ -1.63
PIB1	YDR313C	ENT2	Q05785	613 aa		4.87	□□□□□ -1.63
PIB1	YDR313C	CRD1	Q07560	283 aa		4.87	□□□□□ -1.63
PIB1	YDR313C	LCB4	Q12246	624 aa		4.87	□□□□□ -1.63
PIB1	YDR313C	PNO1	Q99216	274 aa	Known RBP	4.87	□□□□□ -1.63
PIB1	YDR313C	SSB1	P11484	613 aa	Known RBP	4.86	□□□□□ -1.63
PIB1	YDR313C	KES1	P35844	434 aa	Known RBP	4.86	□□□□□ -1.63
PIB1	YDR313C	MTG2	P38860	518 aa		4.86	□□□□□ -1.63
PIB1	YDR313C	SSB2	P40150	613 aa	Known RBP	4.86	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 33.5 ms