RNA–Protein interactions for RNA: YDR034C-D

YDR034C-D, Transcript of Retrotransposon TYA Gag and TYB Pol genes, yeast

Gene YDR034C-D, Length 5,313 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YDR034C-D	YDR034C-D	UTP9	P38882	575 aa	Known RBP	3.17	□□□□□ -1.9
YDR034C-D	YDR034C-D	SMF1	P38925	575 aa		3.17	□□□□□ -1.9
YDR034C-D	YDR034C-D	MPT5	P39016	859 aa	Known RBP RIP-Chip data	3.17	□□□□□ -1.9	not detected
YDR034C-D	YDR034C-D	YIL108W	P40483	696 aa	Known RBP	3.17	□□□□□ -1.9
YDR034C-D	YDR034C-D	FET5	P43561	622 aa		3.17	□□□□□ -1.9
YDR034C-D	YDR034C-D	ROK1	P45818	564 aa	Predicted RBP	3.17	□□□□□ -1.9
YDR034C-D	YDR034C-D	BIT61	P47041	543 aa		3.17	□□□□□ -1.9
YDR034C-D	YDR034C-D	ARG5,6	Q01217	863 aa		3.17	□□□□□ -1.9
YDR034C-D	YDR034C-D	MAP1	Q01662	387 aa	Known RBP RIP-Chip data	3.17	□□□□□ -1.9	not detected
YDR034C-D	YDR034C-D	YPL107W	Q02873	248 aa		3.17	□□□□□ -1.9
YDR034C-D	YDR034C-D	MUS81	Q04149	632 aa	Predicted RBP	3.17	□□□□□ -1.9
YDR034C-D	YDR034C-D	VMA2	P16140	517 aa	Known RBP	3.16	□□□□□ -1.9
YDR034C-D	YDR034C-D	PRP22	P24384	1145 aa	Known RBP	3.16	□□□□□ -1.9
YDR034C-D	YDR034C-D	SAP190	P36123	1033 aa		3.16	□□□□□ -1.9
YDR034C-D	YDR034C-D	TCB2	P48231	1178 aa		3.16	□□□□□ -1.9
YDR034C-D	YDR034C-D	ENP2	P48234	707 aa	Known RBP	3.16	□□□□□ -1.9
YDR034C-D	YDR034C-D	EXG2	P52911	562 aa		3.16	□□□□□ -1.9
YDR034C-D	YDR034C-D	TIM50	Q02776	476 aa		3.16	□□□□□ -1.9
YDR034C-D	YDR034C-D	TRS31	Q03337	283 aa		3.16	□□□□□ -1.9
YDR034C-D	YDR034C-D	YPL277C	Q08989	487 aa		3.16	□□□□□ -1.9
YDR034C-D	YDR034C-D	OSW2	Q12202	724 aa		3.16	□□□□□ -1.9
YDR034C-D	YDR034C-D	MAC1	P35192	417 aa		3.16	□□□□□ -1.9
YDR034C-D	YDR034C-D	PFA3	P42836	336 aa		3.16	□□□□□ -1.9
YDR034C-D	YDR034C-D	YJL055W	P47044	245 aa		3.16	□□□□□ -1.9
YDR034C-D	YDR034C-D	GPD1	Q00055	391 aa	Known RBP	3.16	□□□□□ -1.9
YDR034C-D	YDR034C-D	ARX1	Q03862	593 aa	Known RBP	3.16	□□□□□ -1.9
YDR034C-D	YDR034C-D	NFI1	Q12216	726 aa		3.16	□□□□□ -1.9
YDR034C-D	YDR034C-D	PDH1	Q12428	516 aa	Known RBP	3.16	□□□□□ -1.9
YDR034C-D	YDR034C-D	GND1	P38720	489 aa	Known RBP	3.16	□□□□□ -1.9
YDR034C-D	YDR034C-D	SDP1	P40479	209 aa		3.16	□□□□□ -1.9
YDR034C-D	YDR034C-D	LYS4	P49367	693 aa	Predicted RBP	3.16	□□□□□ -1.9
YDR034C-D	YDR034C-D	DSE4	P53753	1117 aa		3.16	□□□□□ -1.9
YDR034C-D	YDR034C-D	RMT2	Q03305	412 aa		3.16	□□□□□ -1.9
YDR034C-D	YDR034C-D	RAD30	Q04049	632 aa		3.16	□□□□□ -1.9
YDR034C-D	YDR034C-D	ISA1	Q07821	250 aa	Predicted RBP	3.16	□□□□□ -1.9
YDR034C-D	YDR034C-D	PUS1	Q12211	544 aa	Known RBP	3.16	□□□□□ -1.9
YDR034C-D	YDR034C-D	YCK2	P23292	546 aa	Known RBP	3.16	□□□□□ -1.9
YDR034C-D	YDR034C-D	COG1	P53079	417 aa		3.16	□□□□□ -1.9
YDR034C-D	YDR034C-D	OAZ1	Q02803	292 aa		3.16	□□□□□ -1.9
YDR034C-D	YDR034C-D	RPS4A	P0CX35	261 aa	Known RBP	3.15	□□□□□ -1.9
YDR034C-D	YDR034C-D	RPS4B	P0CX36	261 aa	Known RBP	3.15	□□□□□ -1.9
YDR034C-D	YDR034C-D	UIP5	P36137	443 aa		3.15	□□□□□ -1.9
YDR034C-D	YDR034C-D	CST26	P38226	397 aa		3.15	□□□□□ -1.9
YDR034C-D	YDR034C-D	POP2	P39008	433 aa		3.15	□□□□□ -1.9
YDR034C-D	YDR034C-D	PEX7	P39108	375 aa		3.15	□□□□□ -1.9
YDR034C-D	YDR034C-D	FTR1	P40088	404 aa		3.15	□□□□□ -1.9
YDR034C-D	YDR034C-D	URM1	P40554	99 aa	Predicted RBP	3.15	□□□□□ -1.9
YDR034C-D	YDR034C-D	AAD10	P47182	288 aa		3.15	□□□□□ -1.9
YDR034C-D	YDR034C-D	GTB1	Q04924	702 aa		3.15	□□□□□ -1.9
YDR034C-D	YDR034C-D	WHI4	Q07655	649 aa	Known RBP	3.15	□□□□□ -1.9
YDR034C-D	YDR034C-D	SRP101	P32916	621 aa		3.15	□□□□□ -1.91
YDR034C-D	YDR034C-D	MDL1	P33310	695 aa		3.15	□□□□□ -1.91
YDR034C-D	YDR034C-D	TEF4	P36008	412 aa	Known RBP	3.15	□□□□□ -1.91
YDR034C-D	YDR034C-D	APN2	P38207	520 aa		3.15	□□□□□ -1.91
YDR034C-D	YDR034C-D	SIF2	P38262	535 aa		3.15	□□□□□ -1.91
YDR034C-D	YDR034C-D	EHT1	P38295	451 aa		3.15	□□□□□ -1.91
YDR034C-D	YDR034C-D	YHR112C	P38716	378 aa		3.15	□□□□□ -1.91
YDR034C-D	YDR034C-D	YEL025C	P39991	1188 aa		3.15	□□□□□ -1.91
YDR034C-D	YDR034C-D	KHA1	P40309	873 aa		3.15	□□□□□ -1.91
YDR034C-D	YDR034C-D	SEC28	P40509	296 aa	Known RBP	3.15	□□□□□ -1.91
YDR034C-D	YDR034C-D	LCB2	P40970	561 aa		3.15	□□□□□ -1.91
YDR034C-D	YDR034C-D	THI6	P41835	540 aa		3.15	□□□□□ -1.91
YDR034C-D	YDR034C-D	FDC1	Q03034	503 aa		3.15	□□□□□ -1.91
YDR034C-D	YDR034C-D	SFI1	Q12369	946 aa		3.15	□□□□□ -1.91
YDR034C-D	YDR034C-D	MNE1	P24720	663 aa		3.15	□□□□□ -1.91
YDR034C-D	YDR034C-D	HEL1	P36113	551 aa		3.15	□□□□□ -1.91
YDR034C-D	YDR034C-D	VPS41	P38959	992 aa		3.15	□□□□□ -1.91
YDR034C-D	YDR034C-D	RGI2	P40188	164 aa		3.15	□□□□□ -1.91
YDR034C-D	YDR034C-D	TAH11	P47112	604 aa		3.15	□□□□□ -1.91
YDR034C-D	YDR034C-D	ARR3	Q06598	404 aa		3.15	□□□□□ -1.91
YDR034C-D	YDR034C-D	PYC1	P11154	1178 aa	Known RBP	3.15	□□□□□ -1.91
YDR034C-D	YDR034C-D	ERG8	P24521	451 aa		3.15	□□□□□ -1.91
YDR034C-D	YDR034C-D	STB6	P36085	766 aa		3.15	□□□□□ -1.91
YDR034C-D	YDR034C-D	YIR007W	P40566	764 aa		3.15	□□□□□ -1.91
YDR034C-D	YDR034C-D	MRPS35	P53292	345 aa		3.15	□□□□□ -1.91
YDR034C-D	YDR034C-D	MMR1	Q06324	491 aa		3.15	□□□□□ -1.91
YDR034C-D	YDR034C-D	ZRT2	Q12436	422 aa		3.15	□□□□□ -1.91
YDR034C-D	YDR034C-D	PCK1	P10963	549 aa		3.14	□□□□□ -1.91
YDR034C-D	YDR034C-D	SIC1	P38634	284 aa		3.14	□□□□□ -1.91
YDR034C-D	YDR034C-D	ARF3	P40994	183 aa	RIP-Chip data	3.14	□□□□□ -1.91	not detected
YDR034C-D	YDR034C-D	YGR012W	P53206	393 aa		3.14	□□□□□ -1.91
YDR034C-D	YDR034C-D	ASI2	P53895	289 aa		3.14	□□□□□ -1.91
YDR034C-D	YDR034C-D	RPA49	Q01080	415 aa	Predicted RBP	3.14	□□□□□ -1.91
YDR034C-D	YDR034C-D	PEX25	Q02969	394 aa		3.14	□□□□□ -1.91
YDR034C-D	YDR034C-D	UPC2	Q12151	913 aa		3.14	□□□□□ -1.91
YDR034C-D	YDR034C-D	TPK1	P06244	397 aa		3.14	□□□□□ -1.91
YDR034C-D	YDR034C-D	CBS1	P14066	229 aa		3.14	□□□□□ -1.91
YDR034C-D	YDR034C-D	LRG1	P35688	1017 aa		3.14	□□□□□ -1.91
YDR034C-D	YDR034C-D	SGN1	P40561	250 aa	Known RBP RIP-Chip data	3.14	□□□□□ -1.91	not detected
YDR034C-D	YDR034C-D	GCD10	P41814	478 aa		3.14	□□□□□ -1.91
YDR034C-D	YDR034C-D	YJL171C	P46992	396 aa		3.14	□□□□□ -1.91
YDR034C-D	YDR034C-D	VPS4	P52917	437 aa		3.14	□□□□□ -1.91
YDR034C-D	YDR034C-D	NCS2	P53923	493 aa	Predicted RBP	3.14	□□□□□ -1.91
YDR034C-D	YDR034C-D	PSY3	Q12318	242 aa		3.14	□□□□□ -1.91
YDR034C-D	YDR034C-D	RPS9A	O13516	197 aa	Known RBP	3.14	□□□□□ -1.91
YDR034C-D	YDR034C-D	CDC24	P11433	854 aa	Predicted RBP	3.14	□□□□□ -1.91
YDR034C-D	YDR034C-D	DAP2	P18962	818 aa		3.14	□□□□□ -1.91
YDR034C-D	YDR034C-D	ADH5	P38113	351 aa	Known RBP	3.14	□□□□□ -1.91
YDR034C-D	YDR034C-D	MRX1	P40050	688 aa		3.14	□□□□□ -1.91
YDR034C-D	YDR034C-D	GET2	P40056	285 aa		3.14	□□□□□ -1.91

Retrieved 100 of 5,963 RNA–protein pairs in 38.9 ms