RNA–Protein interactions for RNA: YCR096C

HMRA2, Transcript of Silenced copy of a2 at HMR, yeast

Gene HMRA2, Length 360 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HMRA2	YCR096C	YPK1	P12688	680 aa	Known RBP	2.45	□□□□□ -2.02
HMRA2	YCR096C	RPS17B	P14127	136 aa	Known RBP	2.45	□□□□□ -2.02
HMRA2	YCR096C	BFA1	P47113	574 aa		2.45	□□□□□ -2.02
HMRA2	YCR096C	YDL183C	P48569	320 aa		2.45	□□□□□ -2.02
HMRA2	YCR096C	SWI6	P09959	803 aa		2.44	□□□□□ -2.02
HMRA2	YCR096C	EXO84	P38261	753 aa		2.44	□□□□□ -2.02
HMRA2	YCR096C	MNN1	P39106	762 aa		2.44	□□□□□ -2.02
HMRA2	YCR096C	NOP15	P53927	220 aa	Predicted RBP	2.44	□□□□□ -2.02
HMRA2	YCR096C	DIG1	Q03063	452 aa	Known RBP	2.44	□□□□□ -2.02
HMRA2	YCR096C	ECM16	Q04217	1267 aa	Known RBP	2.44	□□□□□ -2.02
HMRA2	YCR096C	GET3	Q12154	354 aa	Known RBP	2.44	□□□□□ -2.02
HMRA2	YCR096C	MTC7	P32633	139 aa		2.43	□□□□□ -2.02
HMRA2	YCR096C	YND1	P40009	630 aa		2.43	□□□□□ -2.02
HMRA2	YCR096C	YNL092W	P53934	400 aa		2.43	□□□□□ -2.02
HMRA2	YCR096C	NSE5	Q03718	556 aa		2.43	□□□□□ -2.02
HMRA2	YCR096C	AIM41	Q12032	185 aa		2.43	□□□□□ -2.02
HMRA2	YCR096C	ILS1	P09436	1072 aa	Known RBP	2.42	□□□□□ -2.02
HMRA2	YCR096C	SEC18	P18759	758 aa	Known RBP	2.42	□□□□□ -2.02
HMRA2	YCR096C	GDA1	P32621	518 aa		2.42	□□□□□ -2.02
HMRA2	YCR096C	YCG1	Q06680	1035 aa		2.42	□□□□□ -2.02
HMRA2	YCR096C	RPL42A	P0CX27	106 aa	Known RBP	2.41	□□□□□ -2.02
HMRA2	YCR096C	RPL42B	P0CX28	106 aa	Known RBP	2.41	□□□□□ -2.02
HMRA2	YCR096C	PBP2	P38151	413 aa	Known RBP RIP-Chip data	2.41	□□□□□ -2.02	not detected
HMRA2	YCR096C	FAA2	P39518	744 aa		2.41	□□□□□ -2.02
HMRA2	YCR096C	NUP82	P40368	713 aa		2.41	□□□□□ -2.02
HMRA2	YCR096C	IES1	P43579	692 aa		2.41	□□□□□ -2.02
HMRA2	YCR096C	YPT11	P48559	417 aa		2.41	□□□□□ -2.02
HMRA2	YCR096C	BET4	Q00618	327 aa		2.41	□□□□□ -2.02
HMRA2	YCR096C	ARA2	Q04212	335 aa		2.41	□□□□□ -2.02
HMRA2	YCR096C	VPS33	P20795	691 aa		2.4	□□□□□ -2.03
HMRA2	YCR096C	THI4	P32318	326 aa		2.4	□□□□□ -2.03
HMRA2	YCR096C	YKL091C	P33324	310 aa	Known RBP	2.4	□□□□□ -2.03
HMRA2	YCR096C	YJL193W	P39542	402 aa		2.4	□□□□□ -2.03
HMRA2	YCR096C	AZF1	P41696	914 aa		2.4	□□□□□ -2.03
HMRA2	YCR096C	MET13	P53128	600 aa		2.4	□□□□□ -2.03
HMRA2	YCR096C	UGO1	Q03327	502 aa		2.4	□□□□□ -2.03
HMRA2	YCR096C	ECM22	Q05958	814 aa	Predicted RBP	2.4	□□□□□ -2.03
HMRA2	YCR096C	GUD1	Q07729	489 aa		2.4	□□□□□ -2.03
HMRA2	YCR096C	RSA1	Q08932	381 aa		2.4	□□□□□ -2.03
HMRA2	YCR096C	RTC1	Q08281	1341 aa		2.4	□□□□□ -2.03
HMRA2	YCR096C	PHO8	P11491	566 aa		2.39	□□□□□ -2.03
HMRA2	YCR096C	SAN1	P22470	610 aa		2.39	□□□□□ -2.03
HMRA2	YCR096C	CNA1	P23287	553 aa		2.39	□□□□□ -2.03
HMRA2	YCR096C	MSH2	P25847	964 aa		2.39	□□□□□ -2.03
HMRA2	YCR096C	NOP7	P53261	605 aa	Known RBP	2.39	□□□□□ -2.03
HMRA2	YCR096C	YNL058C	P53947	316 aa		2.39	□□□□□ -2.03
HMRA2	YCR096C	GSH2	Q08220	491 aa		2.39	□□□□□ -2.03
HMRA2	YCR096C	CRT10	Q08226	957 aa		2.39	□□□□□ -2.03
HMRA2	YCR096C	YLR125W	Q12138	136 aa		2.39	□□□□□ -2.03
HMRA2	YCR096C	RRI1	Q12468	440 aa		2.39	□□□□□ -2.03
HMRA2	YCR096C	PCK1	P10963	549 aa		2.38	□□□□□ -2.03
HMRA2	YCR096C	CDC5	P32562	705 aa		2.38	□□□□□ -2.03
HMRA2	YCR096C	YHR033W	P38690	423 aa		2.38	□□□□□ -2.03
HMRA2	YCR096C	TDA3	P38758	523 aa		2.38	□□□□□ -2.03
HMRA2	YCR096C	ERV46	P39727	415 aa		2.38	□□□□□ -2.03
HMRA2	YCR096C	CIR1	P42940	261 aa		2.38	□□□□□ -2.03
HMRA2	YCR096C	IMP4	P53941	290 aa	Known RBP	2.38	□□□□□ -2.03
HMRA2	YCR096C	FCP1	Q03254	732 aa		2.38	□□□□□ -2.03
HMRA2	YCR096C	TIP41	Q12199	356 aa		2.38	□□□□□ -2.03
HMRA2	YCR096C	Q0010	Q9ZZX9	128 aa		2.38	□□□□□ -2.03
HMRA2	YCR096C	GLN4	P13188	809 aa	Known RBP	2.37	□□□□□ -2.03
HMRA2	YCR096C	PRP16	P15938	1071 aa	Predicted RBP	2.37	□□□□□ -2.03
HMRA2	YCR096C	ZAP1	P47043	880 aa		2.37	□□□□□ -2.03
HMRA2	YCR096C	RAD34	Q06665	692 aa		2.37	□□□□□ -2.03
HMRA2	YCR096C	YOR389W	Q08912	624 aa		2.37	□□□□□ -2.03
HMRA2	YCR096C	LYS21	Q12122	440 aa	Known RBP	2.37	□□□□□ -2.03
HMRA2	YCR096C	YOL098C	Q12496	1037 aa		2.37	□□□□□ -2.03
HMRA2	YCR096C	YER175W-A	Q8TGU4	54 aa		2.37	□□□□□ -2.03
HMRA2	YCR096C	RRP43	P25359	394 aa	Predicted RBP	2.36	□□□□□ -2.03
HMRA2	YCR096C	MTD1	Q02046	320 aa	Known RBP	2.36	□□□□□ -2.03
HMRA2	YCR096C	YLR352W	Q06479	807 aa		2.36	□□□□□ -2.03
HMRA2	YCR096C	HMG2	P12684	1045 aa		2.35	□□□□□ -2.03
HMRA2	YCR096C	BET2	P20133	325 aa		2.35	□□□□□ -2.03
HMRA2	YCR096C	KES1	P35844	434 aa	Known RBP	2.35	□□□□□ -2.03
HMRA2	YCR096C	RKM3	P38222	552 aa		2.35	□□□□□ -2.03
HMRA2	YCR096C	RAD26	P40352	1085 aa		2.35	□□□□□ -2.03
HMRA2	YCR096C	NNF1	P47149	201 aa		2.35	□□□□□ -2.03
HMRA2	YCR096C	YML119W	Q03208	357 aa		2.35	□□□□□ -2.03
HMRA2	YCR096C	RPN4	Q03465	531 aa		2.35	□□□□□ -2.03
HMRA2	YCR096C	YLR001C	Q07895	862 aa		2.35	□□□□□ -2.03
HMRA2	YCR096C	RPS21B	Q3E754	87 aa	Known RBP	2.35	□□□□□ -2.03
HMRA2	YCR096C	CDC23	P16522	626 aa		2.34	□□□□□ -2.03
HMRA2	YCR096C	SFP1	P32432	683 aa		2.34	□□□□□ -2.03
HMRA2	YCR096C	DSS4	P32601	143 aa		2.34	□□□□□ -2.03
HMRA2	YCR096C	YJL107C	P42947	387 aa		2.34	□□□□□ -2.03
HMRA2	YCR096C	RET2	P43621	546 aa		2.34	□□□□□ -2.03
HMRA2	YCR096C	ROK1	P45818	564 aa	Predicted RBP	2.34	□□□□□ -2.03
HMRA2	YCR096C	YNL144C	P53907	740 aa		2.34	□□□□□ -2.03
HMRA2	YCR096C	ACS1	Q01574	713 aa		2.34	□□□□□ -2.03
HMRA2	YCR096C	FMP42	Q04991	504 aa		2.34	□□□□□ -2.03
HMRA2	YCR096C	YLR281C	Q05863	155 aa		2.34	□□□□□ -2.03
HMRA2	YCR096C	NTG2	Q08214	380 aa		2.34	□□□□□ -2.03
HMRA2	YCR096C	REV1	P12689	985 aa		2.33	□□□□□ -2.04
HMRA2	YCR096C	SEC65	P29478	273 aa		2.33	□□□□□ -2.04
HMRA2	YCR096C	RMA1	P36001	430 aa	Known RBP	2.33	□□□□□ -2.04
HMRA2	YCR096C	BUD6	P41697	788 aa		2.33	□□□□□ -2.04
HMRA2	YCR096C	COG2	P53271	262 aa		2.33	□□□□□ -2.04
HMRA2	YCR096C	SND1	Q04007	877 aa		2.33	□□□□□ -2.04
HMRA2	YCR096C	GPN2	Q08726	347 aa	Predicted RBP	2.33	□□□□□ -2.04
HMRA2	YCR096C	CDC26	P14724	124 aa		2.32	□□□□□ -2.04

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