RNA–Protein interactions for RNA: YBL103C

RTG3, Transcript of bHLH/Zip transcription factor for retrograde (RTG) and TOR pathways, yeast

Gene RTG3, Length 1,461 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RTG3	YBL103C	NMD5	P46970	1048 aa		5.2	□□□□□ -1.58
RTG3	YBL103C	RTK1	Q12100	620 aa	Predicted RBP	5.2	□□□□□ -1.58
RTG3	YBL103C	PRS5	Q12265	496 aa	Known RBP	5.2	□□□□□ -1.58
RTG3	YBL103C	HEM12	P32347	362 aa	Predicted RBP	5.19	□□□□□ -1.58
RTG3	YBL103C	OPT1	P40897	799 aa		5.19	□□□□□ -1.58
RTG3	YBL103C	URA3	P03962	267 aa		5.18	□□□□□ -1.58
RTG3	YBL103C	GSY2	P27472	705 aa		5.18	□□□□□ -1.58
RTG3	YBL103C	CDC5	P32562	705 aa		5.18	□□□□□ -1.58
RTG3	YBL103C	RDL1	Q12305	139 aa	Known RBP	5.18	□□□□□ -1.58
RTG3	YBL103C	AHA1	Q12449	350 aa	Known RBP	5.18	□□□□□ -1.58
RTG3	YBL103C	STB5	P38699	743 aa		5.17	□□□□□ -1.58
RTG3	YBL103C	SAE2	P46946	345 aa		5.17	□□□□□ -1.58
RTG3	YBL103C	BSP1	Q06604	576 aa		5.17	□□□□□ -1.58
RTG3	YBL103C	HOS1	Q12214	470 aa		5.17	□□□□□ -1.58
RTG3	YBL103C	YJU2	P28320	278 aa	Predicted RBP	5.16	□□□□□ -1.58
RTG3	YBL103C	STL1	P39932	569 aa		5.16	□□□□□ -1.58
RTG3	YBL103C	MAD2	P40958	196 aa		5.16	□□□□□ -1.58
RTG3	YBL103C	BPL1	P48445	690 aa	Predicted RBP	5.16	□□□□□ -1.58
RTG3	YBL103C	YNR071C	P53757	342 aa		5.16	□□□□□ -1.58
RTG3	YBL103C	YNL092W	P53934	400 aa		5.16	□□□□□ -1.58
RTG3	YBL103C	COG6	P53959	839 aa		5.16	□□□□□ -1.58
RTG3	YBL103C	RSC9	Q03124	581 aa		5.16	□□□□□ -1.58
RTG3	YBL103C	DIN7	Q12086	430 aa		5.16	□□□□□ -1.58
RTG3	YBL103C	YLR111W	Q12528	110 aa		5.16	□□□□□ -1.58
RTG3	YBL103C	URE2	P23202	354 aa	Known RBP	5.15	□□□□□ -1.58
RTG3	YBL103C	ECM32	P32644	1121 aa	Known RBP	5.15	□□□□□ -1.58
RTG3	YBL103C	ENP1	P38333	483 aa	Known RBP	5.15	□□□□□ -1.58
RTG3	YBL103C	COS12	P53053	380 aa		5.15	□□□□□ -1.58
RTG3	YBL103C	HOL1	P53389	586 aa		5.15	□□□□□ -1.58
RTG3	YBL103C	ERG13	P54839	491 aa	Known RBP	5.15	□□□□□ -1.58
RTG3	YBL103C	HRD3	Q05787	833 aa		5.15	□□□□□ -1.58
RTG3	YBL103C	CRT10	Q08226	957 aa		5.15	□□□□□ -1.58
RTG3	YBL103C	PET309	P32522	965 aa	Predicted RBP	5.14	□□□□□ -1.59
RTG3	YBL103C	GDA1	P32621	518 aa		5.14	□□□□□ -1.59
RTG3	YBL103C	SDH8	P38345	138 aa		5.14	□□□□□ -1.59
RTG3	YBL103C	EMP65	P40085	556 aa		5.14	□□□□□ -1.59
RTG3	YBL103C	SNO3	P43544	222 aa		5.14	□□□□□ -1.59
RTG3	YBL103C	MPS1	P54199	764 aa		5.14	□□□□□ -1.59
RTG3	YBL103C	PEX15	Q08215	383 aa		5.14	□□□□□ -1.59
RTG3	YBL103C	GEP3	Q08622	556 aa		5.14	□□□□□ -1.59
RTG3	YBL103C	KAR1	P11927	433 aa		5.13	□□□□□ -1.59
RTG3	YBL103C	TFC4	P33339	1025 aa		5.13	□□□□□ -1.59
RTG3	YBL103C	RAD33	Q04231	177 aa		5.13	□□□□□ -1.59
RTG3	YBL103C	CYK3	Q07533	885 aa		5.13	□□□□□ -1.59
RTG3	YBL103C	CBP3	P21560	335 aa		5.13	□□□□□ -1.59
RTG3	YBL103C	TSR4	P25040	408 aa		5.13	□□□□□ -1.59
RTG3	YBL103C	YML119W	Q03208	357 aa		5.13	□□□□□ -1.59
RTG3	YBL103C	SPN1	Q06505	410 aa	Predicted RBP	5.13	□□□□□ -1.59
RTG3	YBL103C	MTG2	P38860	518 aa		5.12	□□□□□ -1.59
RTG3	YBL103C	YIL092W	P40497	633 aa		5.12	□□□□□ -1.59
RTG3	YBL103C	YPL071C	Q02864	156 aa		5.12	□□□□□ -1.59
RTG3	YBL103C	TPO3	Q06451	622 aa		5.12	□□□□□ -1.59
RTG3	YBL103C	BI2	P03873	423 aa		5.11	□□□□□ -1.59
RTG3	YBL103C	GSM1	P42950	618 aa		5.11	□□□□□ -1.59
RTG3	YBL103C	IDP3	P53982	420 aa	Known RBP	5.11	□□□□□ -1.59
RTG3	YBL103C	YMR085W	P0CF18	432 aa		5.1	□□□□□ -1.59
RTG3	YBL103C	AMD2	P22580	549 aa		5.1	□□□□□ -1.59
RTG3	YBL103C	PLC1	P32383	869 aa		5.1	□□□□□ -1.59
RTG3	YBL103C	UBP16	Q02863	499 aa		5.1	□□□□□ -1.59
RTG3	YBL103C	PHM6	Q05637	104 aa		5.1	□□□□□ -1.59
RTG3	YBL103C	SLX4	Q12098	748 aa		5.1	□□□□□ -1.59
RTG3	YBL103C	DBP10	Q12389	995 aa	Known RBP	5.1	□□□□□ -1.59
RTG3	YBL103C	YAP1	P19880	650 aa	Known RBP	5.09	□□□□□ -1.59
RTG3	YBL103C	SSP120	P39931	234 aa	Known RBP	5.09	□□□□□ -1.59
RTG3	YBL103C	PEX14	P53112	341 aa		5.09	□□□□□ -1.59
RTG3	YBL103C	CIR2	Q08822	631 aa		5.09	□□□□□ -1.59
RTG3	YBL103C	PSF3	Q12146	194 aa		5.09	□□□□□ -1.59
RTG3	YBL103C	PNO1	Q99216	274 aa	Known RBP	5.09	□□□□□ -1.59
RTG3	YBL103C	IDS2	P46958	469 aa		5.08	□□□□□ -1.6
RTG3	YBL103C	CRC1	Q12289	327 aa		5.08	□□□□□ -1.6
RTG3	YBL103C	Q0010	Q9ZZX9	128 aa		5.08	□□□□□ -1.6
RTG3	YBL103C	RRP43	P25359	394 aa	Predicted RBP	5.07	□□□□□ -1.6
RTG3	YBL103C	PRE2	P30656	287 aa	Known RBP	5.07	□□□□□ -1.6
RTG3	YBL103C	COG2	P53271	262 aa		5.07	□□□□□ -1.6
RTG3	YBL103C	CHO2	P05374	869 aa	Known RBP	5.07	□□□□□ -1.6
RTG3	YBL103C	IMD2	P38697	523 aa	Known RBP	5.07	□□□□□ -1.6
RTG3	YBL103C	VPS8	P39702	1274 aa		5.07	□□□□□ -1.6
RTG3	YBL103C	JHD1	P40034	492 aa		5.07	□□□□□ -1.6
RTG3	YBL103C	SCS2	P40075	244 aa	Known RBP	5.07	□□□□□ -1.6
RTG3	YBL103C	IMD3	P50095	523 aa	Known RBP	5.07	□□□□□ -1.6
RTG3	YBL103C	PHO3	P24031	467 aa		5.06	□□□□□ -1.6
RTG3	YBL103C	ARO9	P38840	513 aa	Predicted RBP	5.06	□□□□□ -1.6
RTG3	YBL103C	SAP1	P39955	897 aa	Known RBP	5.06	□□□□□ -1.6
RTG3	YBL103C	MAM1	P40065	302 aa		5.06	□□□□□ -1.6
RTG3	YBL103C	VFA1	P40080	203 aa		5.06	□□□□□ -1.6
RTG3	YBL103C	LAS21	P40367	830 aa		5.06	□□□□□ -1.6
RTG3	YBL103C	MNT3	P40549	630 aa		5.06	□□□□□ -1.6
RTG3	YBL103C	IRC7	P43623	340 aa		5.06	□□□□□ -1.6
RTG3	YBL103C	FOL1	P53848	824 aa		5.06	□□□□□ -1.6
RTG3	YBL103C	YPL068C	Q02749	293 aa		5.06	□□□□□ -1.6
RTG3	YBL103C	YML053C	Q04978	212 aa		5.06	□□□□□ -1.6
RTG3	YBL103C	ENT2	Q05785	613 aa		5.06	□□□□□ -1.6
RTG3	YBL103C	NUR1	Q12066	484 aa		5.06	□□□□□ -1.6
RTG3	YBL103C	RTC1	Q08281	1341 aa		5.05	□□□□□ -1.6
RTG3	YBL103C	TGL1	P34163	548 aa		5.05	□□□□□ -1.6
RTG3	YBL103C	PAF1	P38351	445 aa		5.05	□□□□□ -1.6
RTG3	YBL103C	LNP1	P38878	278 aa		5.05	□□□□□ -1.6
RTG3	YBL103C	ACS1	Q01574	713 aa		5.05	□□□□□ -1.6
RTG3	YBL103C	TRS31	Q03337	283 aa		5.05	□□□□□ -1.6
RTG3	YBL103C	LCB4	Q12246	624 aa		5.05	□□□□□ -1.6

Retrieved 100 of 5,963 RNA–protein pairs in 126.7 ms