RNA–Protein interactions for RNA: ENSMUST00000109477.1

Ccdc88a-202, Transcript of Girdin, mousemouse

TSL 2 BASIC

Gene Ccdc88a, Length 1,716 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-202ENSMUST00000109477 Ttll4Q80UG8 1193 aa24.86■■□□□ 1.57
Ccdc88a-202ENSMUST00000109477 Myl6bQ8CI43 207 aa24.86■■□□□ 1.57
Ccdc88a-202ENSMUST00000109477 Bag4Q8CI61 457 aa24.86■■□□□ 1.57
Ccdc88a-202ENSMUST00000109477 Stx6Q9JKK1 255 aa24.86■■□□□ 1.57
Ccdc88a-202ENSMUST00000109477 Vmn2r23E9PXI5 849 aa24.85■■□□□ 1.57
Ccdc88a-202ENSMUST00000109477 Cpa2Q504N0 417 aa24.85■■□□□ 1.57
Ccdc88a-202ENSMUST00000109477 Mxd3Q80US8 206 aa24.85■■□□□ 1.57
Ccdc88a-202ENSMUST00000109477 Paf1Q8K2T8 535 aa24.85■■□□□ 1.57
Ccdc88a-202ENSMUST00000109477 Glrx3Q9CQM9 337 aa24.85■■□□□ 1.57
Ccdc88a-202ENSMUST00000109477 Efcc1Q9JJF6 558 aa24.85■■□□□ 1.57
Ccdc88a-202ENSMUST00000109477 PogkQ80TC5 607 aa24.84■■□□□ 1.57
Ccdc88a-202ENSMUST00000109477 Ankrd13aQ80UP5 588 aa24.84■■□□□ 1.57
Ccdc88a-202ENSMUST00000109477 Spon1Q8VCC9 807 aa24.84■■□□□ 1.57
Ccdc88a-202ENSMUST00000109477 Ccdc47Q9D024 483 aaKnown RBP24.84■■□□□ 1.57
Ccdc88a-202ENSMUST00000109477 Lrch1P62046 709 aa24.83■■□□□ 1.57
Ccdc88a-202ENSMUST00000109477 Limch1Q3UH68 1057 aa24.83■■□□□ 1.57
Ccdc88a-202ENSMUST00000109477 Gm2163Q6PCY5 473 aa24.83■■□□□ 1.57
Ccdc88a-202ENSMUST00000109477 Otop3Q80UF9 577 aa24.83■■□□□ 1.57
Ccdc88a-202ENSMUST00000109477 Jag1Q9QXX0 1218 aa24.83■■□□□ 1.57
Ccdc88a-202ENSMUST00000109477 Col1a1P11087 1453 aa24.83■■□□□ 1.57
Ccdc88a-202ENSMUST00000109477 Ecm29Q6PDI5 1840 aa24.83■■□□□ 1.57
Ccdc88a-202ENSMUST00000109477 Usp48Q3V0C5 1052 aa24.83■■□□□ 1.57
Ccdc88a-202ENSMUST00000109477 Cep131Q62036 1060 aa24.83■■□□□ 1.57
Ccdc88a-202ENSMUST00000109477 Smarcc2Q6PDG5 1213 aa24.83■■□□□ 1.57
Ccdc88a-202ENSMUST00000109477 Hps6Q8BLY7 805 aa24.83■■□□□ 1.57
Ccdc88a-202ENSMUST00000109477 Eif6O55135 245 aa24.82■■□□□ 1.56
Ccdc88a-202ENSMUST00000109477 Grem2O88273 168 aa24.82■■□□□ 1.56
Ccdc88a-202ENSMUST00000109477 Ccdc93Q7TQK5 629 aa24.82■■□□□ 1.56
Ccdc88a-202ENSMUST00000109477 Stac3Q8BZ71 360 aa24.82■■□□□ 1.56
Ccdc88a-202ENSMUST00000109477 Klf15Q9EPW2 415 aa24.82■■□□□ 1.56
Ccdc88a-202ENSMUST00000109477 Plcb2A3KGF7 1181 aa24.81■■□□□ 1.56
Ccdc88a-202ENSMUST00000109477 Cep63Q3UPP8 700 aa24.81■■□□□ 1.56
Ccdc88a-202ENSMUST00000109477 Zcwpw1Q6IR42 630 aa24.81■■□□□ 1.56
Ccdc88a-202ENSMUST00000109477 Nxf7Q80SZ6 620 aaKnown RBP24.81■■□□□ 1.56
Ccdc88a-202ENSMUST00000109477 Tpcn2Q8BWC0 731 aa24.81■■□□□ 1.56
Ccdc88a-202ENSMUST00000109477 Rai14Q9EP71 979 aaKnown RBP24.81■■□□□ 1.56
Ccdc88a-202ENSMUST00000109477 Znf638Q61464 1960 aaKnown RBP24.81■■□□□ 1.56
Ccdc88a-202ENSMUST00000109477 Wdr19Q3UGF1 1341 aa24.81■■□□□ 1.56
Ccdc88a-202ENSMUST00000109477 Myl10Q62082 202 aa24.81■■□□□ 1.56
Ccdc88a-202ENSMUST00000109477 ZwintQ9CQU5 252 aa24.81■■□□□ 1.56
Ccdc88a-202ENSMUST00000109477 Zfp646Q6NV66 1788 aa24.8■■□□□ 1.56
Ccdc88a-202ENSMUST00000109477 Me1P06801 572 aa24.8■■□□□ 1.56
Ccdc88a-202ENSMUST00000109477 DnttP09838 530 aa24.8■■□□□ 1.56
Ccdc88a-202ENSMUST00000109477 Large2Q5XPT3 690 aa24.8■■□□□ 1.56
Ccdc88a-202ENSMUST00000109477 Tm4sf1Q64302 202 aa24.8■■□□□ 1.56
Ccdc88a-202ENSMUST00000109477 Ssh1Q76I79 1042 aa24.8■■□□□ 1.56
Ccdc88a-202ENSMUST00000109477 Me3Q8BMF3 604 aa24.8■■□□□ 1.56
Ccdc88a-202ENSMUST00000109477 VmacQ8BP01 174 aa24.8■■□□□ 1.56
Ccdc88a-202ENSMUST00000109477 NaspQ99MD9 773 aaKnown RBP24.8■■□□□ 1.56
Ccdc88a-202ENSMUST00000109477 WtapQ9ER69 396 aa24.8■■□□□ 1.56
Ccdc88a-202ENSMUST00000109477 Plekhg2Q6KAU7 1340 aa24.79■■□□□ 1.56
Ccdc88a-202ENSMUST00000109477 Cyp26a1O55127 497 aa24.79■■□□□ 1.56
Ccdc88a-202ENSMUST00000109477 Bms1Q6PGF5 1284 aaKnown RBP24.79■■□□□ 1.56
Ccdc88a-202ENSMUST00000109477 9230110C19RikQ8CC70 267 aa24.79■■□□□ 1.56
Ccdc88a-202ENSMUST00000109477 DymQ8CHY3 669 aa24.79■■□□□ 1.56
Ccdc88a-202ENSMUST00000109477 Stk32bQ9JJX8 414 aa24.79■■□□□ 1.56
Ccdc88a-202ENSMUST00000109477 Prpf38aQ4FK66 312 aaKnown RBP24.78■■□□□ 1.56
Ccdc88a-202ENSMUST00000109477 Fxr1Q61584 677 aaKnown RBP24.78■■□□□ 1.56
Ccdc88a-202ENSMUST00000109477 QarsQ8BML9 775 aa24.78■■□□□ 1.56
Ccdc88a-202ENSMUST00000109477 Tcof1O08784 1320 aaKnown RBP24.78■■□□□ 1.56
Ccdc88a-202ENSMUST00000109477 Aox4Q3TYQ9 1336 aa24.78■■□□□ 1.56
Ccdc88a-202ENSMUST00000109477 Ano3A2AHL1 981 aa24.78■■□□□ 1.56
Ccdc88a-202ENSMUST00000109477 Metap2O08663 478 aaKnown RBP24.78■■□□□ 1.56
Ccdc88a-202ENSMUST00000109477 UncxO08934 530 aa24.78■■□□□ 1.56
Ccdc88a-202ENSMUST00000109477 Slc1a4O35874 532 aa24.78■■□□□ 1.56
Ccdc88a-202ENSMUST00000109477 Mtx1P47802 317 aa24.78■■□□□ 1.56
Ccdc88a-202ENSMUST00000109477 Tom1l2Q5SRX1 507 aa24.78■■□□□ 1.56
Ccdc88a-202ENSMUST00000109477 Pramel6Q810Y9 485 aa24.78■■□□□ 1.56
Ccdc88a-202ENSMUST00000109477 Terb1Q8C0V1 768 aa24.78■■□□□ 1.56
Ccdc88a-202ENSMUST00000109477 Xrcc4Q924T3 326 aa24.78■■□□□ 1.56
Ccdc88a-202ENSMUST00000109477 Ythdc1E9Q5K9 736 aaKnown RBP24.77■■□□□ 1.56
Ccdc88a-202ENSMUST00000109477 Znf667Q2TL60 609 aa24.77■■□□□ 1.56
Ccdc88a-202ENSMUST00000109477 Zfp113Q8C689 439 aa24.77■■□□□ 1.56
Ccdc88a-202ENSMUST00000109477 HibadhQ99L13 335 aaKnown RBP24.77■■□□□ 1.56
Ccdc88a-202ENSMUST00000109477 NinQ61043 2035 aa24.76■■□□□ 1.55
Ccdc88a-202ENSMUST00000109477 Dcdc2bF7BCK0 340 aa24.76■■□□□ 1.55
Ccdc88a-202ENSMUST00000109477 CrkQ64010 304 aa24.76■■□□□ 1.55
Ccdc88a-202ENSMUST00000109477 Ptrh1Q8BW00 204 aa24.76■■□□□ 1.55
Ccdc88a-202ENSMUST00000109477 Bola3Q8CEI1 110 aa24.76■■□□□ 1.55
Ccdc88a-202ENSMUST00000109477 Mrpl44Q9CY73 333 aaKnown RBP24.76■■□□□ 1.55
Ccdc88a-202ENSMUST00000109477 Rcan1Q9JHG6 198 aa24.76■■□□□ 1.55
Ccdc88a-202ENSMUST00000109477 Ltbp2O08999 1813 aa24.76■■□□□ 1.55
Ccdc88a-202ENSMUST00000109477 Arid4aF8VPQ2 1261 aaKnown RBP24.75■■□□□ 1.55
Ccdc88a-202ENSMUST00000109477 Dnajc2P54103 621 aaKnown RBP24.75■■□□□ 1.55
Ccdc88a-202ENSMUST00000109477 Alg3Q8K2A8 438 aa24.75■■□□□ 1.55
Ccdc88a-202ENSMUST00000109477 Trim59Q922Y2 403 aa24.75■■□□□ 1.55
Ccdc88a-202ENSMUST00000109477 NynrinQ5DTZ0 1840 aa24.75■■□□□ 1.55
Ccdc88a-202ENSMUST00000109477 TrdnE9Q9K5 693 aa24.75■■□□□ 1.55
Ccdc88a-202ENSMUST00000109477 Sec23aQ01405 765 aa24.75■■□□□ 1.55
Ccdc88a-202ENSMUST00000109477 Tbc1d2bQ3U0J8 965 aa24.75■■□□□ 1.55
Ccdc88a-202ENSMUST00000109477 Map3k12Q60700 888 aa24.75■■□□□ 1.55
Ccdc88a-202ENSMUST00000109477 DaglaQ6WQJ1 1044 aa24.75■■□□□ 1.55
Ccdc88a-202ENSMUST00000109477 Nol12Q8BG17 217 aa24.75■■□□□ 1.55
Ccdc88a-202ENSMUST00000109477 SpidrQ8BGX7 933 aa24.75■■□□□ 1.55
Ccdc88a-202ENSMUST00000109477 Txnrd3Q99MD6 652 aa24.75■■□□□ 1.55
Ccdc88a-202ENSMUST00000109477 Suclg2Q9Z2I8 433 aa24.75■■□□□ 1.55
Ccdc88a-202ENSMUST00000109477 Rgs12Q8CGE9 1381 aa24.74■■□□□ 1.55
Ccdc88a-202ENSMUST00000109477 Ces1aE9PYP1 563 aa24.74■■□□□ 1.55
Ccdc88a-202ENSMUST00000109477 Rgs9O54828 675 aa24.74■■□□□ 1.55
Ccdc88a-202ENSMUST00000109477 Spata18Q0P557 537 aa24.74■■□□□ 1.55
Retrieved 100 of 22,080 RNA–protein pairs in 17.8 ms