RNA–Protein interactions for RNA: YPR065W

ROX1, Transcript of Heme-dependent repressor of hypoxic genes, yeastyeast

Gene ROX1, Length 1,107 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ROX1YPR065W XDJ1P39102 459 aa8.15□□□□□ -1.1
ROX1YPR065W MGA2P40578 1113 aa8.15□□□□□ -1.1
ROX1YPR065W YEL023CP39992 682 aa8.11□□□□□ -1.11
ROX1YPR065W CST9Q06032 482 aa8.11□□□□□ -1.11
ROX1YPR065W DCW1P36091 449 aa8.08□□□□□ -1.12
ROX1YPR065W VRP1P37370 817 aa8.05□□□□□ -1.12
ROX1YPR065W ELP4Q02884 456 aaKnown RBP7.99□□□□□ -1.13
ROX1YPR065W RCR1P38212 213 aa7.97□□□□□ -1.13
ROX1YPR065W DPS1P04802 557 aaKnown RBP7.96□□□□□ -1.14
ROX1YPR065W PML39Q03760 334 aa7.95□□□□□ -1.14
ROX1YPR065W GRE2Q12068 342 aaKnown RBP7.94□□□□□ -1.14
ROX1YPR065W ARH1P48360 493 aa7.92□□□□□ -1.14
ROX1YPR065W RGA2Q06407 1009 aa7.87□□□□□ -1.15
ROX1YPR065W SPT23P35210 1082 aa7.86□□□□□ -1.15
ROX1YPR065W GUT1P32190 709 aa7.85□□□□□ -1.15
ROX1YPR065W YDR344CQ05510 147 aa7.85□□□□□ -1.15
ROX1YPR065W ATH1P48016 1211 aa7.83□□□□□ -1.16
ROX1YPR065W PTC3P34221 468 aaKnown RBP7.76□□□□□ -1.17
ROX1YPR065W PEX29Q03370 554 aa7.76□□□□□ -1.17
ROX1YPR065W MAK11P20484 414 aaKnown RBP7.75□□□□□ -1.17
ROX1YPR065W MIF2P35201 549 aa7.75□□□□□ -1.17
ROX1YPR065W RGA1P39083 1007 aa7.75□□□□□ -1.17
ROX1YPR065W MID1P41821 548 aa7.75□□□□□ -1.17
ROX1YPR065W YML082WQ04533 649 aaKnown RBP7.75□□□□□ -1.17
ROX1YPR065W AI4P03878 556 aa7.74□□□□□ -1.17
ROX1YPR065W BNI4P53858 892 aa7.74□□□□□ -1.17
ROX1YPR065W NST1P53935 1240 aa7.74□□□□□ -1.17
ROX1YPR065W HAP5Q02516 242 aa7.74□□□□□ -1.17
ROX1YPR065W MPH3P0CE00 602 aa7.73□□□□□ -1.17
ROX1YPR065W SRC1Q03707 834 aa7.72□□□□□ -1.17
ROX1YPR065W PTC2P39966 464 aaKnown RBP7.69□□□□□ -1.18
ROX1YPR065W EDS1P38073 919 aa7.68□□□□□ -1.18
ROX1YPR065W SOL3P38858 249 aa7.66□□□□□ -1.18
ROX1YPR065W NOP53Q12080 455 aaKnown RBP7.62□□□□□ -1.19
ROX1YPR065W COQ8P27697 501 aa7.6□□□□□ -1.19
ROX1YPR065W RAM2P29703 316 aa7.59□□□□□ -1.19
ROX1YPR065W MPC54Q08550 464 aa7.58□□□□□ -1.2
ROX1YPR065W NMA111P53920 997 aa7.55□□□□□ -1.2
ROX1YPR065W ILV3P39522 585 aaKnown RBP7.54□□□□□ -1.2
ROX1YPR065W YGR273CP53329 174 aa7.53□□□□□ -1.2
ROX1YPR065W DPL1Q05567 589 aa7.51□□□□□ -1.21
ROX1YPR065W RAS1P01119 309 aa7.49□□□□□ -1.21
ROX1YPR065W TRK1P12685 1235 aa7.48□□□□□ -1.21
ROX1YPR065W SLI15P38283 698 aa7.47□□□□□ -1.21
ROX1YPR065W AMS1P22855 1083 aa7.45□□□□□ -1.22
ROX1YPR065W ISU2Q12056 156 aa7.45□□□□□ -1.22
ROX1YPR065W SAS4Q04003 481 aa7.43□□□□□ -1.22
ROX1YPR065W GYP1Q08484 637 aa7.42□□□□□ -1.22
ROX1YPR065W RAM1P22007 431 aa7.41□□□□□ -1.22
ROX1YPR065W YPR015CQ12531 247 aa7.4□□□□□ -1.22
ROX1YPR065W YEL077CQ3E7X8 1277 aa7.34□□□□□ -1.23
ROX1YPR065W YPL062WQ02781 134 aa7.33□□□□□ -1.24
ROX1YPR065W MRF1P30775 413 aaPredicted RBP7.32□□□□□ -1.24
ROX1YPR065W KEX1P09620 729 aa7.31□□□□□ -1.24
ROX1YPR065W RPP1BP10622 106 aaKnown RBP7.29□□□□□ -1.24
ROX1YPR065W SDH2P21801 266 aa7.25□□□□□ -1.25
ROX1YPR065W CDC73Q06697 393 aa7.25□□□□□ -1.25
ROX1YPR065W GCR2Q01722 534 aa7.22□□□□□ -1.25
ROX1YPR065W PDR1P12383 1068 aa7.21□□□□□ -1.26
ROX1YPR065W UBP14P38237 781 aaKnown RBP7.17□□□□□ -1.26
ROX1YPR065W BRE2P43132 505 aa7.17□□□□□ -1.26
ROX1YPR065W YLR326WQ06170 240 aaKnown RBP7.17□□□□□ -1.26
ROX1YPR065W PRT1P06103 763 aaKnown RBP7.15□□□□□ -1.26
ROX1YPR065W ERG12P07277 443 aa7.15□□□□□ -1.26
ROX1YPR065W RAD54P32863 898 aa7.14□□□□□ -1.27
ROX1YPR065W GBP2P25555 427 aaKnown RBP RIP-Chip data7.13□□□□□ -1.27not detected
ROX1YPR065W BUD20Q08004 166 aaPredicted RBP7.13□□□□□ -1.27
ROX1YPR065W PCS60P38137 543 aaKnown RBP RIP-Chip data7.12□□□□□ -1.27not detected
ROX1YPR065W VHR2P40041 505 aa7.09□□□□□ -1.27
ROX1YPR065W GAR1P28007 205 aaKnown RBP7.08□□□□□ -1.28
ROX1YPR065W PEX21P50091 288 aa7.08□□□□□ -1.28
ROX1YPR065W SET1P38827 1080 aaKnown RBP7.05□□□□□ -1.28
ROX1YPR065W TFB4Q12004 338 aa7.05□□□□□ -1.28
ROX1YPR065W YRR1Q12172 810 aa7.05□□□□□ -1.28
ROX1YPR065W CSC1Q06538 782 aa7.04□□□□□ -1.28
ROX1YPR065W IFH1P39520 1085 aa7.02□□□□□ -1.29
ROX1YPR065W STR2P47164 639 aa7.02□□□□□ -1.29
ROX1YPR065W CDC4P07834 779 aa7.01□□□□□ -1.29
ROX1YPR065W GAP1P19145 602 aaPredicted RBP7.01□□□□□ -1.29
ROX1YPR065W NPL4P33755 580 aa7.01□□□□□ -1.29
ROX1YPR065W KIC1P38692 1080 aa7.01□□□□□ -1.29
ROX1YPR065W AIR1P40507 360 aaKnown RBP7.01□□□□□ -1.29
ROX1YPR065W ISM1P48526 1002 aa7□□□□□ -1.29
ROX1YPR065W LAM6Q08001 693 aa7□□□□□ -1.29
ROX1YPR065W NUD1P32336 851 aa6.99□□□□□ -1.29
ROX1YPR065W SPT16P32558 1035 aaKnown RBP6.99□□□□□ -1.29
ROX1YPR065W CST6P40535 587 aa6.99□□□□□ -1.29
ROX1YPR065W ENV9Q08651 330 aa6.98□□□□□ -1.29
ROX1YPR065W MET22P32179 357 aa6.96□□□□□ -1.3
ROX1YPR065W YDR090CQ03193 310 aa6.96□□□□□ -1.3
ROX1YPR065W TUM1Q08686 304 aaKnown RBP6.96□□□□□ -1.3
ROX1YPR065W CLA4P48562 842 aa6.95□□□□□ -1.3
ROX1YPR065W PAT1P25644 796 aaKnown RBP6.94□□□□□ -1.3
ROX1YPR065W GCD11P32481 527 aaKnown RBP6.94□□□□□ -1.3
ROX1YPR065W HED1Q03937 162 aa6.93□□□□□ -1.3
ROX1YPR065W SEC2P17065 759 aa6.89□□□□□ -1.31
ROX1YPR065W FRK1Q03002 865 aaPredicted RBP6.89□□□□□ -1.31
ROX1YPR065W YDR444WQ04093 687 aa6.89□□□□□ -1.31
ROX1YPR065W TY1A-DR4O74302 440 aa6.88□□□□□ -1.31
ROX1YPR065W TY1A-HP0C2I4 478 aaKnown RBP6.88□□□□□ -1.31
Retrieved 100 of 5,963 RNA–protein pairs in 12.3 ms