RNA–Protein interactions for RNA: YPR002W

PDH1, Transcript of Putative 2-methylcitrate dehydratase, yeastyeast

Gene PDH1, Length 1,551 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PDH1YPR002W TY1B-DR1Q03855 1755 aa7.9□□□□□ -1.15
PDH1YPR002W TY2B-DR3Q07791 1770 aaKnown RBP7.9□□□□□ -1.15
PDH1YPR002W TY2B-OR1Q12113 1770 aa7.9□□□□□ -1.15
PDH1YPR002W TY2B-DR1Q12472 1770 aa7.9□□□□□ -1.15
PDH1YPR002W TY2B-OR2Q12501 1770 aa7.9□□□□□ -1.15
PDH1YPR002W SMC4Q12267 1418 aa7.88□□□□□ -1.15
PDH1YPR002W IKI3Q06706 1349 aaKnown RBP7.88□□□□□ -1.15
PDH1YPR002W TOP2P06786 1428 aaKnown RBP7.87□□□□□ -1.15
PDH1YPR002W YCF1P39109 1515 aaKnown RBP7.87□□□□□ -1.15
PDH1YPR002W MDS3P53094 1487 aa7.87□□□□□ -1.15
PDH1YPR002W SNQ2P32568 1501 aaKnown RBP7.86□□□□□ -1.15
PDH1YPR002W TY2B-BQ12491 1770 aa7.84□□□□□ -1.15
PDH1YPR002W MLP2P40457 1679 aa7.84□□□□□ -1.15
PDH1YPR002W SAS10Q12136 610 aaPredicted RBP7.84□□□□□ -1.15
PDH1YPR002W SPP41P38904 1435 aa7.82□□□□□ -1.16
PDH1YPR002W NSR1P27476 414 aaKnown RBP RIP-Chip data7.82□□□□□ -1.16not detected
PDH1YPR002W RTG3P38165 486 aa7.8□□□□□ -1.16
PDH1YPR002W ULS1Q08562 1619 aa7.78□□□□□ -1.16
PDH1YPR002W YAP5P40574 245 aa7.78□□□□□ -1.16
PDH1YPR002W PDR15Q04182 1529 aaKnown RBP7.78□□□□□ -1.16
PDH1YPR002W RAM2P29703 316 aa7.77□□□□□ -1.17
PDH1YPR002W TY1B-HO13535 1793 aa7.77□□□□□ -1.17
PDH1YPR002W TY1B-DR5P0C2I2 1755 aa7.77□□□□□ -1.17
PDH1YPR002W TY1B-DR6P0C2I3 1755 aa7.77□□□□□ -1.17
PDH1YPR002W TY1B-LR2P0C2I5 1755 aa7.77□□□□□ -1.17
PDH1YPR002W TY1B-LR3P0C2I6 1755 aaKnown RBP7.77□□□□□ -1.17
PDH1YPR002W TY1B-PR1P0C2I9 1755 aaKnown RBP7.77□□□□□ -1.17
PDH1YPR002W TY1B-PR2P0C2J0 1756 aa7.77□□□□□ -1.17
PDH1YPR002W TY1B-PR3P0C2J1 1755 aaKnown RBP7.77□□□□□ -1.17
PDH1YPR002W TY1B-JR1P47098 1755 aa7.77□□□□□ -1.17
PDH1YPR002W TY1B-ML2Q03434 1755 aaKnown RBP7.77□□□□□ -1.17
PDH1YPR002W TY1B-ER1Q03612 1755 aa7.77□□□□□ -1.17
PDH1YPR002W TY1B-ML1Q04711 1755 aaKnown RBP7.77□□□□□ -1.17
PDH1YPR002W TY1B-GR2Q12269 1755 aa7.77□□□□□ -1.17
PDH1YPR002W TY1B-OLQ12273 1755 aa7.77□□□□□ -1.17
PDH1YPR002W TY1B-PLQ12414 1755 aaKnown RBP7.77□□□□□ -1.17
PDH1YPR002W BUD31P25337 157 aaPredicted RBP7.76□□□□□ -1.17
PDH1YPR002W RCR1P38212 213 aa7.76□□□□□ -1.17
PDH1YPR002W YOR238WQ08634 303 aa7.76□□□□□ -1.17
PDH1YPR002W SSM4P40318 1319 aa7.76□□□□□ -1.17
PDH1YPR002W MST1P07236 462 aa7.76□□□□□ -1.17
PDH1YPR002W STH1P32597 1359 aa7.75□□□□□ -1.17
PDH1YPR002W TY1B-BRQ12193 1756 aa7.73□□□□□ -1.17
PDH1YPR002W TY1B-GR3Q12316 1755 aa7.73□□□□□ -1.17
PDH1YPR002W TY1B-ORQ92393 1755 aa7.73□□□□□ -1.17
PDH1YPR002W TAF7Q05021 590 aa7.73□□□□□ -1.17
PDH1YPR002W VPS29P38759 282 aa7.72□□□□□ -1.17
PDH1YPR002W GEA1P47102 1408 aaPredicted RBP7.72□□□□□ -1.17
PDH1YPR002W PIB1Q06651 286 aa7.71□□□□□ -1.17
PDH1YPR002W TY3B-GQ99315 1547 aa7.71□□□□□ -1.18
PDH1YPR002W MAK11P20484 414 aaKnown RBP7.67□□□□□ -1.18
PDH1YPR002W TSC11P40061 1430 aa7.66□□□□□ -1.18
PDH1YPR002W YMR1P47147 688 aaKnown RBP RIP-Chip data7.66□□□□□ -1.18not detected
PDH1YPR002W YBT1P32386 1661 aa7.65□□□□□ -1.18
PDH1YPR002W TY1B-JR2P47100 1755 aaKnown RBP7.65□□□□□ -1.18
PDH1YPR002W TY1B-ER2Q03619 1755 aa7.65□□□□□ -1.18
PDH1YPR002W TY1B-MR1Q04214 1755 aa7.65□□□□□ -1.18
PDH1YPR002W TY1B-MR2Q04670 1755 aaKnown RBP7.65□□□□□ -1.18
PDH1YPR002W TY1B-LR1Q12088 1755 aaKnown RBP7.65□□□□□ -1.18
PDH1YPR002W TY1B-NL1Q12112 1755 aa7.65□□□□□ -1.18
PDH1YPR002W TY1B-GR1Q12141 1755 aa7.65□□□□□ -1.18
PDH1YPR002W TY1B-BLQ12490 1755 aa7.65□□□□□ -1.18
PDH1YPR002W STS1P38637 319 aa7.65□□□□□ -1.18
PDH1YPR002W UBP9P39967 754 aa7.65□□□□□ -1.18
PDH1YPR002W YFR006WP43590 535 aa7.65□□□□□ -1.18
PDH1YPR002W VTH1P40438 1549 aa7.64□□□□□ -1.19
PDH1YPR002W VTH2P40890 1549 aa7.64□□□□□ -1.19
PDH1YPR002W PAN1P32521 1480 aa7.63□□□□□ -1.19
PDH1YPR002W DBP1P24784 617 aaKnown RBP7.63□□□□□ -1.19
PDH1YPR002W SET1P38827 1080 aaKnown RBP7.63□□□□□ -1.19
PDH1YPR002W YBL029C-AQ3E756 94 aa7.63□□□□□ -1.19
PDH1YPR002W SNT2P53127 1403 aa7.62□□□□□ -1.19
PDH1YPR002W NOP2P40991 618 aaKnown RBP7.62□□□□□ -1.19
PDH1YPR002W ESC1Q03661 1658 aaKnown RBP7.6□□□□□ -1.19
PDH1YPR002W GTT3P39996 337 aa7.59□□□□□ -1.2
PDH1YPR002W CDC25P04821 1589 aa7.58□□□□□ -1.2
PDH1YPR002W IRC20Q06554 1556 aa7.58□□□□□ -1.2
PDH1YPR002W WSC3Q12215 556 aa7.58□□□□□ -1.2
PDH1YPR002W VPS15P22219 1454 aa7.57□□□□□ -1.2
PDH1YPR002W IFH1P39520 1085 aa7.56□□□□□ -1.2
PDH1YPR002W COQ8P27697 501 aa7.55□□□□□ -1.2
PDH1YPR002W PDR10P51533 1564 aa7.55□□□□□ -1.2
PDH1YPR002W VNX1P42839 908 aa7.54□□□□□ -1.2
PDH1YPR002W DNF1P32660 1571 aa7.54□□□□□ -1.2
PDH1YPR002W VMA1P17255 1071 aaKnown RBP7.53□□□□□ -1.2
PDH1YPR002W NTE1Q04958 1679 aa7.52□□□□□ -1.2
PDH1YPR002W MIF2P35201 549 aa7.52□□□□□ -1.21
PDH1YPR002W YPR148CQ06523 435 aa7.52□□□□□ -1.21
PDH1YPR002W RPO21P04050 1733 aaKnown RBP7.52□□□□□ -1.21
PDH1YPR002W POL5P39985 1022 aaKnown RBP7.5□□□□□ -1.21
PDH1YPR002W GEA2P39993 1459 aaKnown RBP7.5□□□□□ -1.21
PDH1YPR002W CAT8P39113 1433 aa7.5□□□□□ -1.21
PDH1YPR002W NOP53Q12080 455 aaKnown RBP7.5□□□□□ -1.21
PDH1YPR002W GCN2P15442 1659 aa7.49□□□□□ -1.21
PDH1YPR002W ENP1P38333 483 aaKnown RBP7.49□□□□□ -1.21
PDH1YPR002W VPS70P47161 811 aa7.49□□□□□ -1.21
PDH1YPR002W RPA190P10964 1664 aaKnown RBP7.48□□□□□ -1.21
PDH1YPR002W NUP159P40477 1460 aa7.47□□□□□ -1.21
PDH1YPR002W EDS1P38073 919 aa7.46□□□□□ -1.21
PDH1YPR002W CKB1P43639 278 aa7.46□□□□□ -1.21
Retrieved 100 of 5,963 RNA–protein pairs in 20.4 ms