RNA–Protein interactions for RNA: YPL046C

ELC1, Transcript of Elongin C, conserved among eukaryotes, yeastyeast

Gene ELC1, Length 300 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ELC1YPL046C YOR238WQ08634 303 aa9.16□□□□□ -0.94
ELC1YPL046C YGL015CP33199 130 aa9.12□□□□□ -0.95
ELC1YPL046C HPC2Q01448 625 aa9.1□□□□□ -0.95
ELC1YPL046C VHR2P40041 505 aa9.09□□□□□ -0.95
ELC1YPL046C TFB3Q03290 321 aa9.06□□□□□ -0.96
ELC1YPL046C PIB1Q06651 286 aa9.05□□□□□ -0.96
ELC1YPL046C KIC1P38692 1080 aa9.04□□□□□ -0.96
ELC1YPL046C BRL1P38770 471 aa9.04□□□□□ -0.96
ELC1YPL046C ATH1P48016 1211 aa9.03□□□□□ -0.96
ELC1YPL046C YDR090CQ03193 310 aa9.02□□□□□ -0.97
ELC1YPL046C UBP14P38237 781 aaKnown RBP9.01□□□□□ -0.97
ELC1YPL046C TY1B-DR4Q07793 1604 aa9.01□□□□□ -0.97
ELC1YPL046C VMA1P17255 1071 aaKnown RBP8.99□□□□□ -0.97
ELC1YPL046C YLR326WQ06170 240 aaKnown RBP8.99□□□□□ -0.97
ELC1YPL046C GRE2Q12068 342 aaKnown RBP8.99□□□□□ -0.97
ELC1YPL046C SSA2P10592 639 aaKnown RBP8.98□□□□□ -0.97
ELC1YPL046C YAP5P40574 245 aa8.98□□□□□ -0.97
ELC1YPL046C GUT1P32190 709 aa8.97□□□□□ -0.97
ELC1YPL046C TCB3Q03640 1545 aaKnown RBP8.96□□□□□ -0.97
ELC1YPL046C TIF4632P39936 914 aaKnown RBP8.96□□□□□ -0.98
ELC1YPL046C PKC1P24583 1151 aa8.95□□□□□ -0.98
ELC1YPL046C PSE1P32337 1089 aaKnown RBP8.95□□□□□ -0.98
ELC1YPL046C CSN12P47130 423 aa8.95□□□□□ -0.98
ELC1YPL046C NSR1P27476 414 aaKnown RBP RIP-Chip data8.94□□□□□ -0.98not detected
ELC1YPL046C RAD54P32863 898 aa8.94□□□□□ -0.98
ELC1YPL046C YGR273CP53329 174 aa8.92□□□□□ -0.98
ELC1YPL046C YJL007CP47080 104 aa8.9□□□□□ -0.98
ELC1YPL046C KEX1P09620 729 aa8.89□□□□□ -0.99
ELC1YPL046C BIM1P40013 344 aa8.89□□□□□ -0.99
ELC1YPL046C PCS60P38137 543 aaKnown RBP RIP-Chip data8.88□□□□□ -0.99not detected
ELC1YPL046C SSA1P10591 642 aaKnown RBP8.87□□□□□ -0.99
ELC1YPL046C TEA1P47988 759 aa8.87□□□□□ -0.99
ELC1YPL046C GYP5Q12344 894 aa8.86□□□□□ -0.99
ELC1YPL046C YML020WQ03722 664 aa8.85□□□□□ -0.99
ELC1YPL046C SUB2Q07478 446 aaKnown RBP8.85□□□□□ -0.99
ELC1YPL046C GEF1P37020 779 aa8.84□□□□□ -0.99
ELC1YPL046C TGL3P40308 642 aa8.84□□□□□ -0.99
ELC1YPL046C ATG32P40458 529 aa8.84□□□□□ -0.99
ELC1YPL046C RPL34BP40525 121 aaKnown RBP8.84□□□□□ -0.99
ELC1YPL046C SAM3Q08986 587 aa8.84□□□□□ -0.99
ELC1YPL046C GLN1P32288 370 aaKnown RBP8.82□□□□□ -1
ELC1YPL046C SOL3P38858 249 aa8.82□□□□□ -1
ELC1YPL046C ORC6P38826 435 aa8.81□□□□□ -1
ELC1YPL046C SLX8P40072 274 aa8.81□□□□□ -1
ELC1YPL046C TYW1Q08960 810 aaKnown RBP8.8□□□□□ -1
ELC1YPL046C SSA4P22202 642 aaKnown RBP8.79□□□□□ -1
ELC1YPL046C KTR1P27810 393 aaKnown RBP8.79□□□□□ -1
ELC1YPL046C YBL036CP38197 257 aa8.79□□□□□ -1
ELC1YPL046C DCW1P36091 449 aa8.77□□□□□ -1.01
ELC1YPL046C GTT3P39996 337 aa8.77□□□□□ -1.01
ELC1YPL046C TIF1P10081 395 aaKnown RBP8.76□□□□□ -1.01
ELC1YPL046C CLB5P30283 435 aa8.76□□□□□ -1.01
ELC1YPL046C RGR1P19263 1082 aa8.75□□□□□ -1.01
ELC1YPL046C YMR196WQ04336 1088 aa8.74□□□□□ -1.01
ELC1YPL046C ERG12P07277 443 aa8.73□□□□□ -1.01
ELC1YPL046C NOP8Q08287 484 aaPredicted RBP8.73□□□□□ -1.01
ELC1YPL046C YPR204WQ08995 1032 aa8.72□□□□□ -1.01
ELC1YPL046C MVP1P40959 511 aaKnown RBP8.71□□□□□ -1.02
ELC1YPL046C CPS1P27614 576 aa8.7□□□□□ -1.02
ELC1YPL046C NIS1P53939 407 aa8.7□□□□□ -1.02
ELC1YPL046C PKH3Q03306 898 aaPredicted RBP8.7□□□□□ -1.02
ELC1YPL046C HTA1P04911 132 aaKnown RBP8.69□□□□□ -1.02
ELC1YPL046C HTA2P04912 132 aa8.69□□□□□ -1.02
ELC1YPL046C BIO2P32451 375 aa8.69□□□□□ -1.02
ELC1YPL046C RTG2P32608 588 aaKnown RBP8.69□□□□□ -1.02
ELC1YPL046C FPK1P53739 893 aa8.69□□□□□ -1.02
ELC1YPL046C NST1P53935 1240 aa8.69□□□□□ -1.02
ELC1YPL046C MMP1Q12372 583 aa8.69□□□□□ -1.02
ELC1YPL046C ECM5Q03214 1411 aa8.69□□□□□ -1.02
ELC1YPL046C MPH3P0CE00 602 aa8.68□□□□□ -1.02
ELC1YPL046C RPP1BP10622 106 aaKnown RBP8.68□□□□□ -1.02
ELC1YPL046C HST2P53686 357 aa8.68□□□□□ -1.02
ELC1YPL046C YOL036WQ08206 761 aa8.68□□□□□ -1.02
ELC1YPL046C AI4P03878 556 aa8.67□□□□□ -1.02
ELC1YPL046C SET4P42948 560 aa8.67□□□□□ -1.02
ELC1YPL046C RAD59Q12223 238 aa8.67□□□□□ -1.02
ELC1YPL046C ESS1P22696 170 aa8.66□□□□□ -1.02
ELC1YPL046C ILV3P39522 585 aaKnown RBP8.66□□□□□ -1.02
ELC1YPL046C YNL108CP53929 270 aa8.66□□□□□ -1.02
ELC1YPL046C RPL34AP87262 121 aaPredicted RBP8.66□□□□□ -1.02
ELC1YPL046C YPR109WQ06104 294 aa8.66□□□□□ -1.02
ELC1YPL046C CSC1Q06538 782 aa8.66□□□□□ -1.02
ELC1YPL046C SCJ1P25303 377 aa8.65□□□□□ -1.02
ELC1YPL046C CSE4P36012 229 aa8.65□□□□□ -1.02
ELC1YPL046C TTI1P36097 1038 aa8.65□□□□□ -1.02
ELC1YPL046C MST1P07236 462 aa8.63□□□□□ -1.03
ELC1YPL046C GAP1P19145 602 aaPredicted RBP8.62□□□□□ -1.03
ELC1YPL046C SLI15P38283 698 aa8.62□□□□□ -1.03
ELC1YPL046C ARG8P18544 423 aa8.61□□□□□ -1.03
ELC1YPL046C YJU3P28321 313 aa8.6□□□□□ -1.03
ELC1YPL046C PEX21P50091 288 aa8.6□□□□□ -1.03
ELC1YPL046C SLD2P34252 453 aa8.59□□□□□ -1.03
ELC1YPL046C DAN4P47179 1161 aa8.59□□□□□ -1.03
ELC1YPL046C NOB1Q08444 459 aaKnown RBP8.58□□□□□ -1.04
ELC1YPL046C TFB4Q12004 338 aa8.58□□□□□ -1.04
ELC1YPL046C SPT6P23615 1451 aaKnown RBP8.57□□□□□ -1.04
ELC1YPL046C YEL023CP39992 682 aa8.57□□□□□ -1.04
ELC1YPL046C CDC73Q06697 393 aa8.57□□□□□ -1.04
ELC1YPL046C HSL1P34244 1518 aa8.56□□□□□ -1.04
ELC1YPL046C SUP45P12385 437 aaKnown RBP8.56□□□□□ -1.04
Retrieved 100 of 5,963 RNA–protein pairs in 67.2 ms