RNA–Protein interactions for RNA: YPL019C

VTC3, Transcript of Subunit of vacuolar transporter chaperone (VTC) complex, yeast

Gene VTC3, Length 2,508 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VTC3	YPL019C	TRM732	Q03496	1420 aa		4.12	□□□□□ -1.75
VTC3	YPL019C	TY1B-ER1	Q03612	1755 aa		4.12	□□□□□ -1.75
VTC3	YPL019C	TY1B-ML1	Q04711	1755 aa	Known RBP	4.12	□□□□□ -1.75
VTC3	YPL019C	MMS22	Q06164	1454 aa		4.12	□□□□□ -1.75
VTC3	YPL019C	TY1B-GR2	Q12269	1755 aa		4.12	□□□□□ -1.75
VTC3	YPL019C	TY1B-OL	Q12273	1755 aa		4.12	□□□□□ -1.75
VTC3	YPL019C	TY1B-PL	Q12414	1755 aa	Known RBP	4.12	□□□□□ -1.75
VTC3	YPL019C	TY2B-B	Q12491	1770 aa		4.12	□□□□□ -1.75
VTC3	YPL019C	UBP9	P39967	754 aa		4.12	□□□□□ -1.75
VTC3	YPL019C	YFR006W	P43590	535 aa		4.12	□□□□□ -1.75
VTC3	YPL019C	MMS1	Q06211	1407 aa		4.1	□□□□□ -1.75
VTC3	YPL019C	TY1B-DR3	Q99231	1755 aa		4.1	□□□□□ -1.75
VTC3	YPL019C	DRS2	P39524	1355 aa		4.09	□□□□□ -1.76
VTC3	YPL019C	YKR023W	P36119	530 aa	Known RBP	4.09	□□□□□ -1.76
VTC3	YPL019C	NUP159	P40477	1460 aa		4.07	□□□□□ -1.76
VTC3	YPL019C	YRF1-1	P0CX20	1796 aa		4.07	□□□□□ -1.76
VTC3	YPL019C	YRF1-5	P0CX21	1796 aa		4.07	□□□□□ -1.76
VTC3	YPL019C	YRF1-8	P0CX22	1796 aa		4.07	□□□□□ -1.76
VTC3	YPL019C	VPS15	P22219	1454 aa		4.07	□□□□□ -1.76
VTC3	YPL019C	SSP1	P38871	571 aa		4.06	□□□□□ -1.76
VTC3	YPL019C	POL1	P13382	1468 aa		4.06	□□□□□ -1.76
VTC3	YPL019C	SPP41	P38904	1435 aa		4.06	□□□□□ -1.76
VTC3	YPL019C	SMC4	Q12267	1418 aa		4.06	□□□□□ -1.76
VTC3	YPL019C	IRC20	Q06554	1556 aa		4.04	□□□□□ -1.76
VTC3	YPL019C	YOR1	P53049	1477 aa		4.04	□□□□□ -1.76
VTC3	YPL019C	TY1B-JR2	P47100	1755 aa	Known RBP	4.04	□□□□□ -1.76
VTC3	YPL019C	TY1B-ER2	Q03619	1755 aa		4.04	□□□□□ -1.76
VTC3	YPL019C	TY1B-MR1	Q04214	1755 aa		4.04	□□□□□ -1.76
VTC3	YPL019C	TY1B-MR2	Q04670	1755 aa	Known RBP	4.04	□□□□□ -1.76
VTC3	YPL019C	TY1B-LR1	Q12088	1755 aa	Known RBP	4.04	□□□□□ -1.76
VTC3	YPL019C	TY1B-NL1	Q12112	1755 aa		4.04	□□□□□ -1.76
VTC3	YPL019C	TY1B-GR1	Q12141	1755 aa		4.04	□□□□□ -1.76
VTC3	YPL019C	TY1B-BL	Q12490	1755 aa		4.04	□□□□□ -1.76
VTC3	YPL019C	NTE1	Q04958	1679 aa		4.04	□□□□□ -1.76
VTC3	YPL019C	TSC11	P40061	1430 aa		4.03	□□□□□ -1.76
VTC3	YPL019C	YLR271W	Q06152	274 aa		4.03	□□□□□ -1.76
VTC3	YPL019C	STU1	P38198	1513 aa		4.02	□□□□□ -1.77
VTC3	YPL019C	VTH1	P40438	1549 aa		4.02	□□□□□ -1.77
VTC3	YPL019C	VTH2	P40890	1549 aa		4.02	□□□□□ -1.77
VTC3	YPL019C	RPO21	P04050	1733 aa	Known RBP	4.02	□□□□□ -1.77
VTC3	YPL019C	DNF2	Q12675	1612 aa		4.01	□□□□□ -1.77
VTC3	YPL019C	YAH1	Q12184	172 aa	Known RBP	4	□□□□□ -1.77
VTC3	YPL019C	MYO4	P32492	1471 aa		4	□□□□□ -1.77
VTC3	YPL019C	NUP170	P38181	1502 aa		3.99	□□□□□ -1.77
VTC3	YPL019C	SNT2	P53127	1403 aa		3.98	□□□□□ -1.77
VTC3	YPL019C	MET10	P39692	1035 aa		3.98	□□□□□ -1.77
VTC3	YPL019C	UBP10	P53874	792 aa	Predicted RBP	3.97	□□□□□ -1.77
VTC3	YPL019C	TFC8	Q12308	588 aa		3.97	□□□□□ -1.77
VTC3	YPL019C	DCD1	P06773	312 aa		3.96	□□□□□ -1.77
VTC3	YPL019C	HO	P09932	586 aa		3.96	□□□□□ -1.77
VTC3	YPL019C	SPO14	P36126	1683 aa		3.96	□□□□□ -1.78
VTC3	YPL019C	SNQ2	P32568	1501 aa	Known RBP	3.95	□□□□□ -1.78
VTC3	YPL019C	ULS1	Q08562	1619 aa		3.95	□□□□□ -1.78
VTC3	YPL019C	CDC27	P38042	758 aa		3.95	□□□□□ -1.78
VTC3	YPL019C	STH1	P32597	1359 aa		3.95	□□□□□ -1.78
VTC3	YPL019C	RTT106	P40161	455 aa		3.94	□□□□□ -1.78
VTC3	YPL019C	YOR093C	Q12275	1648 aa		3.94	□□□□□ -1.78
VTC3	YPL019C	YTA7	P40340	1379 aa		3.94	□□□□□ -1.78
VTC3	YPL019C	TRM3	Q07527	1436 aa		3.93	□□□□□ -1.78
VTC3	YPL019C	CST9	Q06032	482 aa		3.93	□□□□□ -1.78
VTC3	YPL019C	PDR12	Q02785	1511 aa		3.93	□□□□□ -1.78
VTC3	YPL019C	YIL055C	P40523	627 aa	Known RBP	3.92	□□□□□ -1.78
VTC3	YPL019C	RSM7	P47150	247 aa		3.92	□□□□□ -1.78
VTC3	YPL019C	DOP1	Q03921	1698 aa		3.92	□□□□□ -1.78
VTC3	YPL019C	MAP2	P38174	421 aa	Known RBP	3.92	□□□□□ -1.78
VTC3	YPL019C	PDR10	P51533	1564 aa		3.91	□□□□□ -1.78
VTC3	YPL019C	IQG1	Q12280	1495 aa		3.91	□□□□□ -1.78
VTC3	YPL019C	ARP8	Q12386	881 aa	Known RBP RIP-Chip data	3.9	□□□□□ -1.78	not detected
VTC3	YPL019C	BUD3	P25558	1636 aa		3.9	□□□□□ -1.79
VTC3	YPL019C	MGA2	P40578	1113 aa		3.9	□□□□□ -1.79
VTC3	YPL019C	PSD2	P53037	1138 aa	Known RBP	3.9	□□□□□ -1.79
VTC3	YPL019C	MLP2	P40457	1679 aa		3.89	□□□□□ -1.79
VTC3	YPL019C	GDB1	Q06625	1536 aa		3.89	□□□□□ -1.79
VTC3	YPL019C	RGA2	Q06407	1009 aa		3.89	□□□□□ -1.79
VTC3	YPL019C	NUP157	P40064	1391 aa	Known RBP	3.88	□□□□□ -1.79
VTC3	YPL019C	BCH2	P36122	765 aa		3.87	□□□□□ -1.79
VTC3	YPL019C	SAS10	Q12136	610 aa	Predicted RBP	3.87	□□□□□ -1.79
VTC3	YPL019C	PDR15	Q04182	1529 aa	Known RBP	3.86	□□□□□ -1.79
VTC3	YPL019C	AI2	P03876	854 aa		3.85	□□□□□ -1.79
VTC3	YPL019C	CHC1	P22137	1653 aa	Known RBP	3.84	□□□□□ -1.79
VTC3	YPL019C	DNF3	Q12674	1656 aa		3.84	□□□□□ -1.8
VTC3	YPL019C	ARO1	P08566	1588 aa	Known RBP	3.83	□□□□□ -1.8
VTC3	YPL019C	YAP3	P38749	330 aa		3.83	□□□□□ -1.8
VTC3	YPL019C	SEC7	P11075	2009 aa	Known RBP	3.82	□□□□□ -1.8
VTC3	YPL019C	TIF4632	P39936	914 aa	Known RBP	3.82	□□□□□ -1.8
VTC3	YPL019C	TGL3	P40308	642 aa		3.82	□□□□□ -1.8
VTC3	YPL019C	TAF7	Q05021	590 aa		3.82	□□□□□ -1.8
VTC3	YPL019C	RAM2	P29703	316 aa		3.8	□□□□□ -1.8
VTC3	YPL019C	RCR1	P38212	213 aa		3.8	□□□□□ -1.8
VTC3	YPL019C	LEO1	P38439	464 aa		3.8	□□□□□ -1.8
VTC3	YPL019C	EPS1	P40557	701 aa		3.79	□□□□□ -1.8
VTC3	YPL019C	MAK10	Q02197	733 aa		3.79	□□□□□ -1.8
VTC3	YPL019C	BNR1	P40450	1375 aa		3.78	□□□□□ -1.8
VTC3	YPL019C	TY3B-G	Q99315	1547 aa		3.78	□□□□□ -1.8
VTC3	YPL019C	URN1	Q06525	465 aa	Known RBP	3.78	□□□□□ -1.8
VTC3	YPL019C	CAT8	P39113	1433 aa		3.78	□□□□□ -1.8
VTC3	YPL019C	BDF1	P35817	686 aa		3.78	□□□□□ -1.8
VTC3	YPL019C	IFH1	P39520	1085 aa		3.77	□□□□□ -1.81
VTC3	YPL019C	LEU3	P08638	886 aa		3.76	□□□□□ -1.81
VTC3	YPL019C	CKB1	P43639	278 aa		3.75	□□□□□ -1.81

Retrieved 100 of 5,963 RNA–protein pairs in 13 ms