RNA–Protein interactions for RNA: YOR332W

VMA4, Transcript of Subunit E of the V1 domain of the vacuolar H+-ATPase (V-ATPase), yeastyeast

Gene VMA4, Length 702 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VMA4YOR332W TY1B-DR1Q03855 1755 aa8.36□□□□□ -1.07
VMA4YOR332W TY2B-DR3Q07791 1770 aaKnown RBP8.36□□□□□ -1.07
VMA4YOR332W TY2B-OR1Q12113 1770 aa8.36□□□□□ -1.07
VMA4YOR332W TY2B-DR1Q12472 1770 aa8.36□□□□□ -1.07
VMA4YOR332W TY2B-OR2Q12501 1770 aa8.36□□□□□ -1.07
VMA4YOR332W TY1B-DR3Q99231 1755 aa8.36□□□□□ -1.07
VMA4YOR332W NSR1P27476 414 aaKnown RBP RIP-Chip data8.35□□□□□ -1.07not detected
VMA4YOR332W PDR15Q04182 1529 aaKnown RBP8.34□□□□□ -1.07
VMA4YOR332W GEA1P47102 1408 aaPredicted RBP8.33□□□□□ -1.08
VMA4YOR332W MLP2P40457 1679 aa8.31□□□□□ -1.08
VMA4YOR332W ULS1Q08562 1619 aa8.31□□□□□ -1.08
VMA4YOR332W TY2B-BQ12491 1770 aa8.3□□□□□ -1.08
VMA4YOR332W EPS1P40557 701 aa8.3□□□□□ -1.08
VMA4YOR332W TSC11P40061 1430 aa8.28□□□□□ -1.08
VMA4YOR332W TY3B-GQ99315 1547 aa8.26□□□□□ -1.09
VMA4YOR332W NOP2P40991 618 aaKnown RBP8.25□□□□□ -1.09
VMA4YOR332W SCY1P53009 804 aa8.25□□□□□ -1.09
VMA4YOR332W PAN1P32521 1480 aa8.25□□□□□ -1.09
VMA4YOR332W TY1B-HO13535 1793 aa8.23□□□□□ -1.09
VMA4YOR332W TY1B-DR5P0C2I2 1755 aa8.23□□□□□ -1.09
VMA4YOR332W TY1B-DR6P0C2I3 1755 aa8.23□□□□□ -1.09
VMA4YOR332W TY1B-LR2P0C2I5 1755 aa8.23□□□□□ -1.09
VMA4YOR332W TY1B-LR3P0C2I6 1755 aaKnown RBP8.23□□□□□ -1.09
VMA4YOR332W TY1B-PR1P0C2I9 1755 aaKnown RBP8.23□□□□□ -1.09
VMA4YOR332W TY1B-PR2P0C2J0 1756 aa8.23□□□□□ -1.09
VMA4YOR332W TY1B-PR3P0C2J1 1755 aaKnown RBP8.23□□□□□ -1.09
VMA4YOR332W TY1B-JR1P47098 1755 aa8.23□□□□□ -1.09
VMA4YOR332W TY1B-ML2Q03434 1755 aaKnown RBP8.23□□□□□ -1.09
VMA4YOR332W TY1B-ER1Q03612 1755 aa8.23□□□□□ -1.09
VMA4YOR332W TY1B-ML1Q04711 1755 aaKnown RBP8.23□□□□□ -1.09
VMA4YOR332W TY1B-GR2Q12269 1755 aa8.23□□□□□ -1.09
VMA4YOR332W TY1B-OLQ12273 1755 aa8.23□□□□□ -1.09
VMA4YOR332W TY1B-PLQ12414 1755 aaKnown RBP8.23□□□□□ -1.09
VMA4YOR332W BDF1P35817 686 aa8.23□□□□□ -1.09
VMA4YOR332W SNT2P53127 1403 aa8.22□□□□□ -1.09
VMA4YOR332W IFH1P39520 1085 aa8.22□□□□□ -1.09
VMA4YOR332W VTH1P40438 1549 aa8.21□□□□□ -1.1
VMA4YOR332W VTH2P40890 1549 aa8.21□□□□□ -1.1
VMA4YOR332W MRM1P25270 412 aa8.2□□□□□ -1.1
VMA4YOR332W TY1B-BRQ12193 1756 aa8.2□□□□□ -1.1
VMA4YOR332W TY1B-GR3Q12316 1755 aa8.2□□□□□ -1.1
VMA4YOR332W TY1B-ORQ92393 1755 aa8.2□□□□□ -1.1
VMA4YOR332W MAP2P38174 421 aaKnown RBP8.19□□□□□ -1.1
VMA4YOR332W UBP10P53874 792 aaPredicted RBP8.18□□□□□ -1.1
VMA4YOR332W VPS15P22219 1454 aa8.17□□□□□ -1.1
VMA4YOR332W RAM2P29703 316 aa8.15□□□□□ -1.1
VMA4YOR332W POL5P39985 1022 aaKnown RBP8.14□□□□□ -1.11
VMA4YOR332W YGL015CP33199 130 aa8.13□□□□□ -1.11
VMA4YOR332W YBT1P32386 1661 aa8.13□□□□□ -1.11
VMA4YOR332W ENP1P38333 483 aaKnown RBP8.12□□□□□ -1.11
VMA4YOR332W CDC25P04821 1589 aa8.12□□□□□ -1.11
VMA4YOR332W IRC20Q06554 1556 aa8.12□□□□□ -1.11
VMA4YOR332W RCR1P38212 213 aa8.11□□□□□ -1.11
VMA4YOR332W TY1B-JR2P47100 1755 aaKnown RBP8.1□□□□□ -1.11
VMA4YOR332W TY1B-ER2Q03619 1755 aa8.1□□□□□ -1.11
VMA4YOR332W TY1B-MR1Q04214 1755 aa8.1□□□□□ -1.11
VMA4YOR332W TY1B-MR2Q04670 1755 aaKnown RBP8.1□□□□□ -1.11
VMA4YOR332W TY1B-LR1Q12088 1755 aaKnown RBP8.1□□□□□ -1.11
VMA4YOR332W TY1B-NL1Q12112 1755 aa8.1□□□□□ -1.11
VMA4YOR332W TY1B-GR1Q12141 1755 aa8.1□□□□□ -1.11
VMA4YOR332W TY1B-BLQ12490 1755 aa8.1□□□□□ -1.11
VMA4YOR332W CAT8P39113 1433 aa8.1□□□□□ -1.11
VMA4YOR332W ESC1Q03661 1658 aaKnown RBP8.09□□□□□ -1.11
VMA4YOR332W RTG3P38165 486 aa8.09□□□□□ -1.11
VMA4YOR332W RTT106P40161 455 aa8.09□□□□□ -1.11
VMA4YOR332W DNF1P32660 1571 aa8.09□□□□□ -1.11
VMA4YOR332W GEA2P39993 1459 aaKnown RBP8.07□□□□□ -1.12
VMA4YOR332W PDR10P51533 1564 aa8.07□□□□□ -1.12
VMA4YOR332W LEO1P38439 464 aa8.07□□□□□ -1.12
VMA4YOR332W SLX5P32828 619 aaKnown RBP8.06□□□□□ -1.12
VMA4YOR332W SEC3P33332 1336 aaKnown RBP8.05□□□□□ -1.12
VMA4YOR332W SET1P38827 1080 aaKnown RBP8.04□□□□□ -1.12
VMA4YOR332W NUP159P40477 1460 aa8.04□□□□□ -1.12
VMA4YOR332W LEU3P08638 886 aa8.03□□□□□ -1.12
VMA4YOR332W SPT7P35177 1332 aa8.03□□□□□ -1.12
VMA4YOR332W SRB8P25648 1427 aa8.02□□□□□ -1.13
VMA4YOR332W GDB1Q06625 1536 aa8.01□□□□□ -1.13
VMA4YOR332W NTE1Q04958 1679 aa8.01□□□□□ -1.13
VMA4YOR332W ARO1P08566 1588 aaKnown RBP8□□□□□ -1.13
VMA4YOR332W GCN2P15442 1659 aa7.99□□□□□ -1.13
VMA4YOR332W RPO21P04050 1733 aaKnown RBP7.99□□□□□ -1.13
VMA4YOR332W MAK11P20484 414 aaKnown RBP7.99□□□□□ -1.13
VMA4YOR332W PDR5P33302 1511 aaKnown RBP7.98□□□□□ -1.13
VMA4YOR332W VPS29P38759 282 aa7.97□□□□□ -1.13
VMA4YOR332W RPA190P10964 1664 aaKnown RBP7.97□□□□□ -1.13
VMA4YOR332W PDR12Q02785 1511 aa7.94□□□□□ -1.14
VMA4YOR332W VPS70P47161 811 aa7.94□□□□□ -1.14
VMA4YOR332W YPR148CQ06523 435 aa7.93□□□□□ -1.14
VMA4YOR332W PRS1P32895 427 aaKnown RBP7.91□□□□□ -1.14
VMA4YOR332W IQG1Q12280 1495 aa7.91□□□□□ -1.14
VMA4YOR332W YLR419WQ06698 1435 aaKnown RBP7.9□□□□□ -1.14
VMA4YOR332W CKB1P43639 278 aa7.9□□□□□ -1.14
VMA4YOR332W YMR1P47147 688 aaKnown RBP RIP-Chip data7.9□□□□□ -1.14 RIP-Chip
VMA4YOR332W COQ8P27697 501 aa7.89□□□□□ -1.15
VMA4YOR332W MMS1Q06211 1407 aa7.88□□□□□ -1.15
VMA4YOR332W YSP2Q06681 1438 aa7.88□□□□□ -1.15
VMA4YOR332W MHP1P43638 1398 aa7.88□□□□□ -1.15
VMA4YOR332W SPB4P25808 606 aaPredicted RBP7.87□□□□□ -1.15
VMA4YOR332W SPO14P36126 1683 aa7.86□□□□□ -1.15
VMA4YOR332W STS1P38637 319 aa7.86□□□□□ -1.15
Retrieved 100 of 5,963 RNA–protein pairs in 47.5 ms