RNA–Protein interactions for RNA: YOR193W

PEX27, Transcript of Peripheral peroxisomal membrane protein, yeastyeast

Gene PEX27, Length 1,131 nt, Biotype protein coding, Subcellular localisation Peroxisome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PEX27YOR193W TFG1P41895 735 aaPredicted RBP11.93□□□□□ -0.5
PEX27YOR193W MIF2P35201 549 aa11.92□□□□□ -0.5
PEX27YOR193W YEL023CP39992 682 aa11.92□□□□□ -0.5
PEX27YOR193W PTC4P38089 393 aa11.91□□□□□ -0.5
PEX27YOR193W GRE2Q12068 342 aaKnown RBP11.91□□□□□ -0.5
PEX27YOR193W PTC3P34221 468 aaKnown RBP11.87□□□□□ -0.51
PEX27YOR193W SAP30P38429 201 aa11.86□□□□□ -0.51
PEX27YOR193W YDL129WQ07555 291 aa11.86□□□□□ -0.51
PEX27YOR193W COQ8P27697 501 aa11.83□□□□□ -0.52
PEX27YOR193W GUT1P32190 709 aa11.81□□□□□ -0.52
PEX27YOR193W ATH1P48016 1211 aa11.81□□□□□ -0.52
PEX27YOR193W NST1P53935 1240 aa11.76□□□□□ -0.53
PEX27YOR193W CHL1P22516 861 aaPredicted RBP11.7□□□□□ -0.54
PEX27YOR193W SOL3P38858 249 aa11.7□□□□□ -0.54
PEX27YOR193W PRE3P38624 215 aa11.69□□□□□ -0.54
PEX27YOR193W PML39Q03760 334 aa11.69□□□□□ -0.54
PEX27YOR193W NOP53Q12080 455 aaKnown RBP11.66□□□□□ -0.54
PEX27YOR193W YDR344CQ05510 147 aa11.63□□□□□ -0.55
PEX27YOR193W MPH3P0CE00 602 aa11.6□□□□□ -0.55
PEX27YOR193W AI4P03878 556 aa11.59□□□□□ -0.55
PEX27YOR193W BCK2P33306 851 aa11.59□□□□□ -0.55
PEX27YOR193W ILV3P39522 585 aaKnown RBP11.56□□□□□ -0.56
PEX27YOR193W MID1P41821 548 aa11.56□□□□□ -0.56
PEX27YOR193W YGR273CP53329 174 aa11.53□□□□□ -0.56
PEX27YOR193W ARH1P48360 493 aa11.51□□□□□ -0.57
PEX27YOR193W ELP4Q02884 456 aaKnown RBP11.51□□□□□ -0.57
PEX27YOR193W VRP1P37370 817 aa11.41□□□□□ -0.58
PEX27YOR193W PEX29Q03370 554 aa11.41□□□□□ -0.58
PEX27YOR193W SET1P38827 1080 aaKnown RBP11.39□□□□□ -0.59
PEX27YOR193W SPT23P35210 1082 aa11.36□□□□□ -0.59
PEX27YOR193W XDJ1P39102 459 aa11.36□□□□□ -0.59
PEX27YOR193W HAP5Q02516 242 aa11.35□□□□□ -0.59
PEX27YOR193W MPC54Q08550 464 aa11.35□□□□□ -0.59
PEX27YOR193W SLI15P38283 698 aa11.34□□□□□ -0.59
PEX27YOR193W KEX1P09620 729 aa11.3□□□□□ -0.6
PEX27YOR193W BNI4P53858 892 aa11.28□□□□□ -0.6
PEX27YOR193W NMA111P53920 997 aa11.25□□□□□ -0.61
PEX27YOR193W DPL1Q05567 589 aa11.24□□□□□ -0.61
PEX27YOR193W UBP14P38237 781 aaKnown RBP11.23□□□□□ -0.61
PEX27YOR193W YLR326WQ06170 240 aaKnown RBP11.23□□□□□ -0.61
PEX27YOR193W YML082WQ04533 649 aaKnown RBP11.22□□□□□ -0.61
PEX27YOR193W PTC2P39966 464 aaKnown RBP11.2□□□□□ -0.62
PEX27YOR193W VHR2P40041 505 aa11.18□□□□□ -0.62
PEX27YOR193W CDC73Q06697 393 aa11.14□□□□□ -0.63
PEX27YOR193W PCS60P38137 543 aaKnown RBP RIP-Chip data11.13□□□□□ -0.63 RIP-Chip
PEX27YOR193W ISU2Q12056 156 aa11.13□□□□□ -0.63
PEX27YOR193W DPS1P04802 557 aaKnown RBP11.1□□□□□ -0.63
PEX27YOR193W IFH1P39520 1085 aa11.1□□□□□ -0.63
PEX27YOR193W RAD54P32863 898 aa11.09□□□□□ -0.63
PEX27YOR193W RAM1P22007 431 aa11.08□□□□□ -0.64
PEX27YOR193W YPR015CQ12531 247 aa11.07□□□□□ -0.64
PEX27YOR193W YDR090CQ03193 310 aa11.06□□□□□ -0.64
PEX27YOR193W YPR148CQ06523 435 aa11.06□□□□□ -0.64
PEX27YOR193W PDR1P12383 1068 aa10.97□□□□□ -0.65
PEX27YOR193W REF2P42073 533 aaPredicted RBP10.96□□□□□ -0.65
PEX27YOR193W RPP1BP10622 106 aaKnown RBP10.94□□□□□ -0.66
PEX27YOR193W KIC1P38692 1080 aa10.92□□□□□ -0.66
PEX27YOR193W GAP1P19145 602 aaPredicted RBP10.9□□□□□ -0.66
PEX27YOR193W VPS70P47161 811 aa10.88□□□□□ -0.67
PEX27YOR193W SRC1Q03707 834 aa10.88□□□□□ -0.67
PEX27YOR193W GYP1Q08484 637 aa10.85□□□□□ -0.67
PEX27YOR193W RAS1P01119 309 aa10.83□□□□□ -0.68
PEX27YOR193W YRR1Q12172 810 aa10.83□□□□□ -0.68
PEX27YOR193W CSC1Q06538 782 aa10.82□□□□□ -0.68
PEX27YOR193W ORC6P38826 435 aa10.81□□□□□ -0.68
PEX27YOR193W TFB4Q12004 338 aa10.81□□□□□ -0.68
PEX27YOR193W COX6P00427 148 aa10.8□□□□□ -0.68
PEX27YOR193W SDH2P21801 266 aa10.8□□□□□ -0.68
PEX27YOR193W PEX21P50091 288 aa10.8□□□□□ -0.68
PEX27YOR193W SAS4Q04003 481 aa10.8□□□□□ -0.68
PEX27YOR193W MAK21Q12176 1025 aaKnown RBP10.8□□□□□ -0.68
PEX27YOR193W BUD20Q08004 166 aaPredicted RBP10.77□□□□□ -0.69
PEX27YOR193W AMS1P22855 1083 aa10.75□□□□□ -0.69
PEX27YOR193W STR2P47164 639 aa10.74□□□□□ -0.69
PEX27YOR193W TUM1Q08686 304 aaKnown RBP10.74□□□□□ -0.69
PEX27YOR193W ISM1P48526 1002 aa10.72□□□□□ -0.69
PEX27YOR193W NUD1P32336 851 aa10.7□□□□□ -0.7
PEX27YOR193W PRT1P06103 763 aaKnown RBP10.69□□□□□ -0.7
PEX27YOR193W MVP1P40959 511 aaKnown RBP10.68□□□□□ -0.7
PEX27YOR193W RGR1P19263 1082 aa10.63□□□□□ -0.71
PEX27YOR193W CKB1P43639 278 aa10.63□□□□□ -0.71
PEX27YOR193W YEL077CQ3E7X8 1277 aa10.63□□□□□ -0.71
PEX27YOR193W MRF1P30775 413 aaPredicted RBP10.62□□□□□ -0.71
PEX27YOR193W TY1A-DR4O74302 440 aa10.6□□□□□ -0.71
PEX27YOR193W PBS2P08018 668 aa10.6□□□□□ -0.71
PEX27YOR193W TY1A-HP0C2I4 478 aaKnown RBP10.6□□□□□ -0.71
PEX27YOR193W TY1A-AP0CX57 440 aa10.6□□□□□ -0.71
PEX27YOR193W TY1A-PR1P0CX58 440 aa10.6□□□□□ -0.71
PEX27YOR193W TY1A-ORP0CX59 440 aa10.6□□□□□ -0.71
PEX27YOR193W TY1A-PR2P0CX60 440 aa10.6□□□□□ -0.71
PEX27YOR193W TY1A-DR5P0CX65 440 aa10.6□□□□□ -0.71
PEX27YOR193W TY1A-ER2P0CX66 440 aa10.6□□□□□ -0.71
PEX27YOR193W TY1A-GR3P0CX67 440 aa10.6□□□□□ -0.71
PEX27YOR193W TY1A-LR1P0CX68 440 aa10.6□□□□□ -0.71
PEX27YOR193W TY1A-MR2P0CX69 440 aa10.6□□□□□ -0.71
PEX27YOR193W TY1A-JR2P47099 440 aa10.6□□□□□ -0.71
PEX27YOR193W TY1A-DR1Q03856 440 aa10.6□□□□□ -0.71
PEX27YOR193W TY1A-ML1Q04706 440 aaKnown RBP10.6□□□□□ -0.71
PEX27YOR193W YPR109WQ06104 294 aa10.6□□□□□ -0.71
PEX27YOR193W TY1A-BRQ12217 440 aa10.6□□□□□ -0.71
Retrieved 100 of 5,963 RNA–protein pairs in 66.3 ms