RNA–Protein interactions for RNA: YOR188W

MSB1, Transcript of Protein of unknown function, yeastyeast

Gene MSB1, Length 3,414 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSB1YOR188W YRF1-5P0CX21 1796 aa3.8□□□□□ -1.8
MSB1YOR188W YRF1-8P0CX22 1796 aa3.8□□□□□ -1.8
MSB1YOR188W TSC11P40061 1430 aa3.79□□□□□ -1.8
MSB1YOR188W SNT2P53127 1403 aa3.79□□□□□ -1.8
MSB1YOR188W PDR15Q04182 1529 aaKnown RBP3.78□□□□□ -1.8
MSB1YOR188W IRC20Q06554 1556 aa3.78□□□□□ -1.8
MSB1YOR188W TY3B-GQ99315 1547 aa3.77□□□□□ -1.81
MSB1YOR188W YBT1P32386 1661 aa3.77□□□□□ -1.81
MSB1YOR188W NUP170P38181 1502 aa3.76□□□□□ -1.81
MSB1YOR188W MET5P47169 1442 aa3.74□□□□□ -1.81
MSB1YOR188W SPO14P36126 1683 aa3.73□□□□□ -1.81
MSB1YOR188W TRM732Q03496 1420 aa3.73□□□□□ -1.81
MSB1YOR188W HAA1Q12753 694 aaKnown RBP3.73□□□□□ -1.81
MSB1YOR188W NUP159P40477 1460 aa3.73□□□□□ -1.81
MSB1YOR188W PDR12Q02785 1511 aa3.73□□□□□ -1.81
MSB1YOR188W STH1P32597 1359 aa3.72□□□□□ -1.81
MSB1YOR188W GEA2P39993 1459 aaKnown RBP3.72□□□□□ -1.81
MSB1YOR188W GDB1Q06625 1536 aa3.71□□□□□ -1.82
MSB1YOR188W AAD16Q02895 342 aa3.71□□□□□ -1.82
MSB1YOR188W GEA1P47102 1408 aaPredicted RBP3.7□□□□□ -1.82
MSB1YOR188W VPS15P22219 1454 aa3.68□□□□□ -1.82
MSB1YOR188W ARO1P08566 1588 aaKnown RBP3.68□□□□□ -1.82
MSB1YOR188W PDR10P51533 1564 aa3.68□□□□□ -1.82
MSB1YOR188W RQC2Q12532 1038 aaKnown RBP3.67□□□□□ -1.82
MSB1YOR188W BNI1P41832 1953 aa3.66□□□□□ -1.82
MSB1YOR188W CAT8P39113 1433 aa3.66□□□□□ -1.82
MSB1YOR188W SAS10Q12136 610 aaPredicted RBP3.66□□□□□ -1.82
MSB1YOR188W PRI1P10363 409 aa3.65□□□□□ -1.83
MSB1YOR188W TAF7Q05021 590 aa3.64□□□□□ -1.83
MSB1YOR188W DOP1Q03921 1698 aa3.64□□□□□ -1.83
MSB1YOR188W LTE1P07866 1435 aa3.64□□□□□ -1.83
MSB1YOR188W CHC1P22137 1653 aaKnown RBP3.64□□□□□ -1.83
MSB1YOR188W IKI3Q06706 1349 aaKnown RBP3.63□□□□□ -1.83
MSB1YOR188W YCK3P39962 524 aa3.63□□□□□ -1.83
MSB1YOR188W BUD3P25558 1636 aa3.62□□□□□ -1.83
MSB1YOR188W IQG1Q12280 1495 aa3.61□□□□□ -1.83
MSB1YOR188W NUP157P40064 1391 aaKnown RBP3.6□□□□□ -1.83
MSB1YOR188W SSM4P40318 1319 aa3.6□□□□□ -1.83
MSB1YOR188W SEC7P11075 2009 aaKnown RBP3.6□□□□□ -1.83
MSB1YOR188W YSP2Q06681 1438 aa3.6□□□□□ -1.83
MSB1YOR188W GCN2P15442 1659 aa3.59□□□□□ -1.83
MSB1YOR188W IFH1P39520 1085 aa3.58□□□□□ -1.84
MSB1YOR188W MET10P39692 1035 aa3.58□□□□□ -1.84
MSB1YOR188W TRM3Q07527 1436 aa3.58□□□□□ -1.84
MSB1YOR188W YOR093CQ12275 1648 aa3.58□□□□□ -1.84
MSB1YOR188W SRB8P25648 1427 aa3.57□□□□□ -1.84
MSB1YOR188W DNF2Q12675 1612 aa3.57□□□□□ -1.84
MSB1YOR188W RTT106P40161 455 aa3.57□□□□□ -1.84
MSB1YOR188W VMR1P38735 1592 aa3.56□□□□□ -1.84
MSB1YOR188W PDR5P33302 1511 aaKnown RBP3.55□□□□□ -1.84
MSB1YOR188W NUP188P52593 1655 aaKnown RBP3.55□□□□□ -1.84
MSB1YOR188W DRS2P39524 1355 aa3.54□□□□□ -1.84
MSB1YOR188W MMS1Q06211 1407 aa3.53□□□□□ -1.84
MSB1YOR188W ITT1Q04638 464 aa3.51□□□□□ -1.85
MSB1YOR188W BNR1P40450 1375 aa3.5□□□□□ -1.85
MSB1YOR188W IML1P47170 1584 aa3.49□□□□□ -1.85
MSB1YOR188W DNF3Q12674 1656 aa3.49□□□□□ -1.85
MSB1YOR188W HAP1P0CE41 1502 aa3.49□□□□□ -1.85
MSB1YOR188W NUP192P47054 1683 aa3.49□□□□□ -1.85
MSB1YOR188W PDR11P40550 1411 aa3.48□□□□□ -1.85
MSB1YOR188W CKB1P43639 278 aa3.48□□□□□ -1.85
MSB1YOR188W BUD21Q08492 214 aaPredicted RBP3.44□□□□□ -1.86
MSB1YOR188W ISW2Q08773 1120 aa3.44□□□□□ -1.86
MSB1YOR188W RAV1P47104 1357 aa3.43□□□□□ -1.86
MSB1YOR188W TY3B-IQ7LHG5 1498 aaKnown RBP3.42□□□□□ -1.86
MSB1YOR188W USO1P25386 1790 aa3.41□□□□□ -1.86
MSB1YOR188W RTC1Q08281 1341 aa3.39□□□□□ -1.87
MSB1YOR188W BCK1Q01389 1478 aa3.38□□□□□ -1.87
MSB1YOR188W TY1B-NL2Q99337 1749 aaKnown RBP3.38□□□□□ -1.87
MSB1YOR188W TYS1P36421 394 aaKnown RBP3.37□□□□□ -1.87
MSB1YOR188W IPL1P38991 367 aa3.37□□□□□ -1.87
MSB1YOR188W YGL015CP33199 130 aa3.37□□□□□ -1.87
MSB1YOR188W YAP3P38749 330 aa3.37□□□□□ -1.87
MSB1YOR188W RPG1P38249 964 aaKnown RBP3.35□□□□□ -1.87
MSB1YOR188W BFR2Q06631 534 aaKnown RBP3.35□□□□□ -1.87
MSB1YOR188W TSR3Q12094 313 aaKnown RBP3.35□□□□□ -1.87
MSB1YOR188W YLR419WQ06698 1435 aaKnown RBP3.34□□□□□ -1.87
MSB1YOR188W CFT1Q06632 1357 aaKnown RBP3.34□□□□□ -1.87
MSB1YOR188W URN1Q06525 465 aaKnown RBP3.34□□□□□ -1.88
MSB1YOR188W NOP7P53261 605 aaKnown RBP3.33□□□□□ -1.88
MSB1YOR188W MLP1Q02455 1875 aaKnown RBP3.32□□□□□ -1.88
MSB1YOR188W RAD9P14737 1309 aa3.32□□□□□ -1.88
MSB1YOR188W BUD31P25337 157 aaPredicted RBP3.32□□□□□ -1.88
MSB1YOR188W PAF1P38351 445 aa3.32□□□□□ -1.88
MSB1YOR188W TY4B-HP0C2J7 1802 aa3.32□□□□□ -1.88
MSB1YOR188W TY4B-JP47024 1803 aa3.32□□□□□ -1.88
MSB1YOR188W MRPL32P25348 183 aa3.31□□□□□ -1.88
MSB1YOR188W YIL177CP40434 1758 aa3.31□□□□□ -1.88
MSB1YOR188W YJL225CP40889 1758 aa3.31□□□□□ -1.88
MSB1YOR188W MAK10Q02197 733 aa3.31□□□□□ -1.88
MSB1YOR188W ABP1P15891 592 aaKnown RBP3.3□□□□□ -1.88
MSB1YOR188W ALD4P46367 519 aaKnown RBP3.29□□□□□ -1.88
MSB1YOR188W KRE5P22023 1365 aa3.29□□□□□ -1.88
MSB1YOR188W MHP1P43638 1398 aa3.29□□□□□ -1.88
MSB1YOR188W YML133CQ03099 1374 aa3.29□□□□□ -1.88
MSB1YOR188W YLL067CQ07888 1374 aa3.29□□□□□ -1.88
MSB1YOR188W YLL066CQ99208 1374 aa3.29□□□□□ -1.88
MSB1YOR188W ESL2P36168 1195 aa3.29□□□□□ -1.88
MSB1YOR188W TAF5P38129 798 aa3.28□□□□□ -1.88
MSB1YOR188W POL5P39985 1022 aaKnown RBP3.28□□□□□ -1.88
Retrieved 100 of 5,963 RNA–protein pairs in 56.4 ms