RNA–Protein interactions for RNA: YNR070W

PDR18, Transcript of Putative transporter of the ATP-binding cassette (ABC) family, yeast

Gene PDR18, Length 4,002 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PDR18	YNR070W	GAS4	Q08271	471 aa		7.43	□□□□□ -1.22
PDR18	YNR070W	PKH1	Q03407	766 aa		7.42	□□□□□ -1.22
PDR18	YNR070W	PDI1	P17967	522 aa	Known RBP	7.42	□□□□□ -1.22
PDR18	YNR070W	POL1	P13382	1468 aa		7.42	□□□□□ -1.22
PDR18	YNR070W	SRB8	P25648	1427 aa		7.41	□□□□□ -1.22
PDR18	YNR070W	MAK21	Q12176	1025 aa	Known RBP	7.41	□□□□□ -1.22
PDR18	YNR070W	YAP3	P38749	330 aa		7.41	□□□□□ -1.22
PDR18	YNR070W	YPK9	Q12697	1472 aa		7.4	□□□□□ -1.23
PDR18	YNR070W	RPC31	P17890	251 aa		7.39	□□□□□ -1.23
PDR18	YNR070W	DPS1	P04802	557 aa	Known RBP	7.39	□□□□□ -1.23
PDR18	YNR070W	RCM1	P53972	490 aa		7.39	□□□□□ -1.23
PDR18	YNR070W	RTG3	P38165	486 aa		7.39	□□□□□ -1.23
PDR18	YNR070W	BDP1	P46678	594 aa		7.39	□□□□□ -1.23
PDR18	YNR070W	DAL5	P15365	543 aa		7.38	□□□□□ -1.23
PDR18	YNR070W	VPS15	P22219	1454 aa		7.37	□□□□□ -1.23
PDR18	YNR070W	BUB1	P41695	1021 aa	Known RBP RIP-Chip data	7.37	□□□□□ -1.23	not detected
PDR18	YNR070W	COG8	Q04632	607 aa		7.37	□□□□□ -1.23
PDR18	YNR070W	CDC45	Q08032	650 aa		7.37	□□□□□ -1.23
PDR18	YNR070W	NUP159	P40477	1460 aa		7.36	□□□□□ -1.23
PDR18	YNR070W	MPP10	P47083	593 aa	Known RBP	7.36	□□□□□ -1.23
PDR18	YNR070W	YOR1	P53049	1477 aa		7.35	□□□□□ -1.23
PDR18	YNR070W	MYO4	P32492	1471 aa		7.35	□□□□□ -1.23
PDR18	YNR070W	VPS27	P40343	622 aa	Known RBP	7.35	□□□□□ -1.23
PDR18	YNR070W	MHP1	P43638	1398 aa		7.34	□□□□□ -1.23
PDR18	YNR070W	TPD3	P31383	635 aa		7.34	□□□□□ -1.23
PDR18	YNR070W	IPL1	P38991	367 aa		7.34	□□□□□ -1.23
PDR18	YNR070W	SNQ2	P32568	1501 aa	Known RBP	7.33	□□□□□ -1.24
PDR18	YNR070W	LEU2	P04173	364 aa	Predicted RBP	7.33	□□□□□ -1.24
PDR18	YNR070W	TYS1	P36421	394 aa	Known RBP	7.33	□□□□□ -1.24
PDR18	YNR070W	PUF6	Q04373	656 aa	Known RBP	7.33	□□□□□ -1.24
PDR18	YNR070W	AIM44	Q99299	758 aa		7.33	□□□□□ -1.24
PDR18	YNR070W	LEO1	P38439	464 aa		7.32	□□□□□ -1.24
PDR18	YNR070W	ITT1	Q04638	464 aa		7.32	□□□□□ -1.24
PDR18	YNR070W	MMS1	Q06211	1407 aa		7.32	□□□□□ -1.24
PDR18	YNR070W	SUP35	P05453	685 aa	Known RBP	7.32	□□□□□ -1.24
PDR18	YNR070W	PRP45	P28004	379 aa	Predicted RBP	7.31	□□□□□ -1.24
PDR18	YNR070W	NMD2	P38798	1089 aa	Known RBP	7.31	□□□□□ -1.24
PDR18	YNR070W	VPS64	Q03944	604 aa		7.31	□□□□□ -1.24
PDR18	YNR070W	SSK2	P53599	1579 aa		7.31	□□□□□ -1.24
PDR18	YNR070W	ALD4	P46367	519 aa	Known RBP	7.31	□□□□□ -1.24
PDR18	YNR070W	NCB2	Q92317	146 aa		7.31	□□□□□ -1.24
PDR18	YNR070W	IOC4	Q04213	475 aa		7.3	□□□□□ -1.24
PDR18	YNR070W	ENP2	P48234	707 aa	Known RBP	7.29	□□□□□ -1.24
PDR18	YNR070W	RFC1	P38630	861 aa	Known RBP	7.28	□□□□□ -1.24
PDR18	YNR070W	ARP5	P53946	755 aa		7.28	□□□□□ -1.24
PDR18	YNR070W	SIN3	P22579	1536 aa		7.28	□□□□□ -1.24
PDR18	YNR070W	RPS24A	P0CX31	135 aa	Known RBP	7.28	□□□□□ -1.24
PDR18	YNR070W	RPS24B	P0CX32	135 aa	Known RBP	7.28	□□□□□ -1.24
PDR18	YNR070W	HSP104	P31539	908 aa	Known RBP	7.28	□□□□□ -1.24
PDR18	YNR070W	CFT1	Q06632	1357 aa	Known RBP	7.28	□□□□□ -1.24
PDR18	YNR070W	SEN54	Q02825	467 aa	Predicted RBP	7.27	□□□□□ -1.25
PDR18	YNR070W	ATG13	Q06628	738 aa		7.27	□□□□□ -1.25
PDR18	YNR070W	RPO31	P04051	1460 aa		7.27	□□□□□ -1.25
PDR18	YNR070W	IQG1	Q12280	1495 aa		7.27	□□□□□ -1.25
PDR18	YNR070W	RRT14	P40470	206 aa		7.26	□□□□□ -1.25
PDR18	YNR070W	CAT8	P39113	1433 aa		7.25	□□□□□ -1.25
PDR18	YNR070W	GRX4	P32642	244 aa		7.25	□□□□□ -1.25
PDR18	YNR070W	NSE3	Q05541	303 aa		7.25	□□□□□ -1.25
PDR18	YNR070W	ESF1	Q06344	628 aa	Known RBP	7.25	□□□□□ -1.25
PDR18	YNR070W	PDR15	Q04182	1529 aa	Known RBP	7.25	□□□□□ -1.25
PDR18	YNR070W	GEA2	P39993	1459 aa	Known RBP	7.25	□□□□□ -1.25
PDR18	YNR070W	ZDS1	P50111	915 aa	Known RBP	7.24	□□□□□ -1.25
PDR18	YNR070W	YCF1	P39109	1515 aa	Known RBP	7.24	□□□□□ -1.25
PDR18	YNR070W	RRP8	P38961	392 aa	Known RBP	7.24	□□□□□ -1.25
PDR18	YNR070W	BUD27	P43573	796 aa	Known RBP RIP-Chip data	7.24	□□□□□ -1.25	not detected
PDR18	YNR070W	RMD1	Q03441	430 aa		7.24	□□□□□ -1.25
PDR18	YNR070W	KRE5	P22023	1365 aa		7.23	□□□□□ -1.25
PDR18	YNR070W	ESP1	Q03018	1630 aa		7.23	□□□□□ -1.25
PDR18	YNR070W	MTR4	P47047	1073 aa	Known RBP	7.23	□□□□□ -1.25
PDR18	YNR070W	SVF1	Q05515	481 aa		7.23	□□□□□ -1.25
PDR18	YNR070W	MAK10	Q02197	733 aa		7.22	□□□□□ -1.25
PDR18	YNR070W	TPM1	P17536	199 aa	Known RBP	7.22	□□□□□ -1.25
PDR18	YNR070W	YNG2	P38806	282 aa	Known RBP	7.21	□□□□□ -1.26
PDR18	YNR070W	FPR4	Q06205	392 aa	Predicted RBP	7.21	□□□□□ -1.26
PDR18	YNR070W	RVB2	Q12464	471 aa	Known RBP	7.21	□□□□□ -1.26
PDR18	YNR070W	VAS1	P07806	1104 aa	Known RBP	7.21	□□□□□ -1.26
PDR18	YNR070W	AOS1	Q06624	347 aa		7.21	□□□□□ -1.26
PDR18	YNR070W	ISW2	Q08773	1120 aa		7.21	□□□□□ -1.26
PDR18	YNR070W	RRI2	Q12348	645 aa		7.21	□□□□□ -1.26
PDR18	YNR070W	ESC2	Q06340	456 aa		7.2	□□□□□ -1.26
PDR18	YNR070W	ECM16	Q04217	1267 aa	Known RBP	7.19	□□□□□ -1.26
PDR18	YNR070W	LAM6	Q08001	693 aa		7.19	□□□□□ -1.26
PDR18	YNR070W	MIF2	P35201	549 aa		7.19	□□□□□ -1.26
PDR18	YNR070W	YBP2	P53169	641 aa		7.19	□□□□□ -1.26
PDR18	YNR070W	YMR196W	Q04336	1088 aa		7.18	□□□□□ -1.26
PDR18	YNR070W	VTH1	P40438	1549 aa		7.18	□□□□□ -1.26
PDR18	YNR070W	VTH2	P40890	1549 aa		7.18	□□□□□ -1.26
PDR18	YNR070W	PRP40	P33203	583 aa	Known RBP	7.18	□□□□□ -1.26
PDR18	YNR070W	CAB3	P36076	571 aa		7.18	□□□□□ -1.26
PDR18	YNR070W	MEC3	Q02574	474 aa		7.18	□□□□□ -1.26
PDR18	YNR070W	NUP133	P36161	1157 aa		7.18	□□□□□ -1.26
PDR18	YNR070W	RLF2	Q12495	606 aa		7.17	□□□□□ -1.26
PDR18	YNR070W	PBY1	P38254	753 aa		7.17	□□□□□ -1.26
PDR18	YNR070W	HPC2	Q01448	625 aa		7.16	□□□□□ -1.26
PDR18	YNR070W	RAD9	P14737	1309 aa		7.16	□□□□□ -1.26
PDR18	YNR070W	RTC1	Q08281	1341 aa		7.16	□□□□□ -1.26
PDR18	YNR070W	PRP5	P21372	849 aa	Predicted RBP	7.16	□□□□□ -1.26
PDR18	YNR070W	MFT1	P33441	392 aa	Known RBP	7.16	□□□□□ -1.26
PDR18	YNR070W	GYP7	P48365	746 aa		7.16	□□□□□ -1.26
PDR18	YNR070W	SER1	P33330	395 aa	Known RBP	7.15	□□□□□ -1.26

Retrieved 100 of 5,963 RNA–protein pairs in 7.4 ms