RNA–Protein interactions for RNA: YNL104C

LEU4, Transcript of Alpha-isopropylmalate synthase (2-isopropylmalate synthase), yeast

Gene LEU4, Length 1,860 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LEU4	YNL104C	TY1B-ER2	Q03619	1755 aa		11.62	□□□□□ -0.55
LEU4	YNL104C	TY1B-MR1	Q04214	1755 aa		11.62	□□□□□ -0.55
LEU4	YNL104C	TY1B-MR2	Q04670	1755 aa	Known RBP	11.62	□□□□□ -0.55
LEU4	YNL104C	TY1B-LR1	Q12088	1755 aa	Known RBP	11.62	□□□□□ -0.55
LEU4	YNL104C	TY1B-NL1	Q12112	1755 aa		11.62	□□□□□ -0.55
LEU4	YNL104C	TY1B-GR1	Q12141	1755 aa		11.62	□□□□□ -0.55
LEU4	YNL104C	TY1B-BL	Q12490	1755 aa		11.62	□□□□□ -0.55
LEU4	YNL104C	NOP2	P40991	618 aa	Known RBP	11.61	□□□□□ -0.55
LEU4	YNL104C	POL5	P39985	1022 aa	Known RBP	11.6	□□□□□ -0.55
LEU4	YNL104C	YBT1	P32386	1661 aa		11.58	□□□□□ -0.56
LEU4	YNL104C	RTT106	P40161	455 aa		11.58	□□□□□ -0.56
LEU4	YNL104C	ESC1	Q03661	1658 aa	Known RBP	11.57	□□□□□ -0.56
LEU4	YNL104C	IRC20	Q06554	1556 aa		11.54	□□□□□ -0.56
LEU4	YNL104C	GEA2	P39993	1459 aa	Known RBP	11.53	□□□□□ -0.56
LEU4	YNL104C	CAT8	P39113	1433 aa		11.53	□□□□□ -0.56
LEU4	YNL104C	DNF1	P32660	1571 aa		11.5	□□□□□ -0.57
LEU4	YNL104C	ENP1	P38333	483 aa	Known RBP	11.49	□□□□□ -0.57
LEU4	YNL104C	SRB8	P25648	1427 aa		11.45	□□□□□ -0.58
LEU4	YNL104C	NTE1	Q04958	1679 aa		11.44	□□□□□ -0.58
LEU4	YNL104C	RPO21	P04050	1733 aa	Known RBP	11.44	□□□□□ -0.58
LEU4	YNL104C	GDB1	Q06625	1536 aa		11.44	□□□□□ -0.58
LEU4	YNL104C	RPA190	P10964	1664 aa	Known RBP	11.43	□□□□□ -0.58
LEU4	YNL104C	MTC1	P47018	478 aa	Known RBP	11.42	□□□□□ -0.58
LEU4	YNL104C	PDR10	P51533	1564 aa		11.41	□□□□□ -0.58
LEU4	YNL104C	SEC3	P33332	1336 aa	Known RBP	11.41	□□□□□ -0.58
LEU4	YNL104C	SPT7	P35177	1332 aa		11.4	□□□□□ -0.58
LEU4	YNL104C	ARO1	P08566	1588 aa	Known RBP	11.39	□□□□□ -0.59
LEU4	YNL104C	NUP159	P40477	1460 aa		11.38	□□□□□ -0.59
LEU4	YNL104C	GCN2	P15442	1659 aa		11.37	□□□□□ -0.59
LEU4	YNL104C	CKB1	P43639	278 aa		11.36	□□□□□ -0.59
LEU4	YNL104C	PDR12	Q02785	1511 aa		11.31	□□□□□ -0.6
LEU4	YNL104C	MET10	P39692	1035 aa		11.29	□□□□□ -0.6
LEU4	YNL104C	BUD21	Q08492	214 aa	Predicted RBP	11.28	□□□□□ -0.6
LEU4	YNL104C	NUP157	P40064	1391 aa	Known RBP	11.27	□□□□□ -0.61
LEU4	YNL104C	NOP7	P53261	605 aa	Known RBP	11.27	□□□□□ -0.61
LEU4	YNL104C	SPO14	P36126	1683 aa		11.26	□□□□□ -0.61
LEU4	YNL104C	PDR5	P33302	1511 aa	Known RBP	11.25	□□□□□ -0.61
LEU4	YNL104C	YSP2	Q06681	1438 aa		11.25	□□□□□ -0.61
LEU4	YNL104C	BUD3	P25558	1636 aa		11.25	□□□□□ -0.61
LEU4	YNL104C	MMS1	Q06211	1407 aa		11.24	□□□□□ -0.61
LEU4	YNL104C	IQG1	Q12280	1495 aa		11.22	□□□□□ -0.61
LEU4	YNL104C	YRF1-1	P0CX20	1796 aa		11.2	□□□□□ -0.62
LEU4	YNL104C	YRF1-5	P0CX21	1796 aa		11.2	□□□□□ -0.62
LEU4	YNL104C	YRF1-8	P0CX22	1796 aa		11.2	□□□□□ -0.62
LEU4	YNL104C	PRS1	P32895	427 aa	Known RBP	11.2	□□□□□ -0.62
LEU4	YNL104C	MHP1	P43638	1398 aa		11.18	□□□□□ -0.62
LEU4	YNL104C	PSD2	P53037	1138 aa	Known RBP	11.15	□□□□□ -0.62
LEU4	YNL104C	PAF1	P38351	445 aa		11.15	□□□□□ -0.63
LEU4	YNL104C	BFR2	Q06631	534 aa	Known RBP	11.14	□□□□□ -0.63
LEU4	YNL104C	LEU3	P08638	886 aa		11.13	□□□□□ -0.63
LEU4	YNL104C	ORC1	P54784	914 aa	Predicted RBP	11.12	□□□□□ -0.63
LEU4	YNL104C	YLR419W	Q06698	1435 aa	Known RBP	11.12	□□□□□ -0.63
LEU4	YNL104C	YOR093C	Q12275	1648 aa		11.11	□□□□□ -0.63
LEU4	YNL104C	LTE1	P07866	1435 aa		11.1	□□□□□ -0.63
LEU4	YNL104C	TY3B-I	Q7LHG5	1498 aa	Known RBP	11.09	□□□□□ -0.63
LEU4	YNL104C	MET5	P47169	1442 aa		11.08	□□□□□ -0.64
LEU4	YNL104C	BNR1	P40450	1375 aa		11.07	□□□□□ -0.64
LEU4	YNL104C	SEC7	P11075	2009 aa	Known RBP	11.06	□□□□□ -0.64
LEU4	YNL104C	RAV1	P47104	1357 aa		11.04	□□□□□ -0.64
LEU4	YNL104C	CHC1	P22137	1653 aa	Known RBP	11.04	□□□□□ -0.64
LEU4	YNL104C	RTC1	Q08281	1341 aa		11.03	□□□□□ -0.64
LEU4	YNL104C	PDR11	P40550	1411 aa		11.02	□□□□□ -0.65
LEU4	YNL104C	PDS5	Q04264	1277 aa		11.01	□□□□□ -0.65
LEU4	YNL104C	TAF5	P38129	798 aa		10.98	□□□□□ -0.65
LEU4	YNL104C	DRS2	P39524	1355 aa		10.95	□□□□□ -0.66
LEU4	YNL104C	VMR1	P38735	1592 aa		10.94	□□□□□ -0.66
LEU4	YNL104C	KIP3	P53086	805 aa	Known RBP	10.93	□□□□□ -0.66
LEU4	YNL104C	NST1	P53935	1240 aa		10.93	□□□□□ -0.66
LEU4	YNL104C	ESL2	P36168	1195 aa		10.93	□□□□□ -0.66
LEU4	YNL104C	TFA1	P36100	482 aa		10.89	□□□□□ -0.67
LEU4	YNL104C	IML1	P47170	1584 aa		10.88	□□□□□ -0.67
LEU4	YNL104C	NUP192	P47054	1683 aa		10.88	□□□□□ -0.67
LEU4	YNL104C	CFT1	Q06632	1357 aa	Known RBP	10.87	□□□□□ -0.67
LEU4	YNL104C	NUP188	P52593	1655 aa	Known RBP	10.87	□□□□□ -0.67
LEU4	YNL104C	DOP1	Q03921	1698 aa		10.85	□□□□□ -0.67
LEU4	YNL104C	SPE2	P21182	396 aa		10.81	□□□□□ -0.68
LEU4	YNL104C	SCT1	P32784	759 aa		10.81	□□□□□ -0.68
LEU4	YNL104C	TRM3	Q07527	1436 aa		10.81	□□□□□ -0.68
LEU4	YNL104C	RPP0	P05317	312 aa	Known RBP	10.78	□□□□□ -0.68
LEU4	YNL104C	FUN12	P39730	1002 aa	Known RBP	10.78	□□□□□ -0.68
LEU4	YNL104C	CDC45	Q08032	650 aa		10.76	□□□□□ -0.69
LEU4	YNL104C	DNF2	Q12675	1612 aa		10.76	□□□□□ -0.69
LEU4	YNL104C	RTG3	P38165	486 aa		10.76	□□□□□ -0.69
LEU4	YNL104C	VPS27	P40343	622 aa	Known RBP	10.76	□□□□□ -0.69
LEU4	YNL104C	YAP3	P38749	330 aa		10.75	□□□□□ -0.69
LEU4	YNL104C	TYS1	P36421	394 aa	Known RBP	10.73	□□□□□ -0.69
LEU4	YNL104C	RVB2	Q12464	471 aa	Known RBP	10.72	□□□□□ -0.69
LEU4	YNL104C	MLP1	Q02455	1875 aa	Known RBP	10.72	□□□□□ -0.69
LEU4	YNL104C	IOC4	Q04213	475 aa		10.72	□□□□□ -0.69
LEU4	YNL104C	FKH1	P40466	484 aa		10.71	□□□□□ -0.69
LEU4	YNL104C	TAF8	Q03750	510 aa		10.71	□□□□□ -0.69
LEU4	YNL104C	IPL1	P38991	367 aa		10.7	□□□□□ -0.7
LEU4	YNL104C	CHZ1	P40019	153 aa	Predicted RBP	10.7	□□□□□ -0.7
LEU4	YNL104C	ALD4	P46367	519 aa	Known RBP	10.69	□□□□□ -0.7
LEU4	YNL104C	RAD9	P14737	1309 aa		10.69	□□□□□ -0.7
LEU4	YNL104C	BCK1	Q01389	1478 aa		10.68	□□□□□ -0.7
LEU4	YNL104C	TRK1	P12685	1235 aa		10.68	□□□□□ -0.7
LEU4	YNL104C	YEF3	P16521	1044 aa	Known RBP	10.68	□□□□□ -0.7
LEU4	YNL104C	YDL144C	Q07589	356 aa		10.68	□□□□□ -0.7
LEU4	YNL104C	RPC31	P17890	251 aa		10.67	□□□□□ -0.7

Retrieved 100 of 5,963 RNA–protein pairs in 54.5 ms