RNA–Protein interactions for RNA: YMR229C

RRP5, Transcript of RNA binding protein involved in synthesis of both 18S and 5.8S rRNAs, yeast

Gene RRP5, Length 5,190 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RRP5	YMR229C	PRI1	P10363	409 aa		4.05	□□□□□ -1.76
RRP5	YMR229C	CLC1	P17891	233 aa		4.05	□□□□□ -1.76
RRP5	YMR229C	MEC3	Q02574	474 aa		4.05	□□□□□ -1.76
RRP5	YMR229C	CHD1	P32657	1468 aa		4.04	□□□□□ -1.76
RRP5	YMR229C	HIR3	P47171	1648 aa		4.04	□□□□□ -1.76
RRP5	YMR229C	YAP3	P38749	330 aa		4.04	□□□□□ -1.76
RRP5	YMR229C	TPM1	P17536	199 aa	Known RBP	4.03	□□□□□ -1.76
RRP5	YMR229C	SPP41	P38904	1435 aa		4.03	□□□□□ -1.76
RRP5	YMR229C	KIP3	P53086	805 aa	Known RBP	4.03	□□□□□ -1.76
RRP5	YMR229C	ASF1	P32447	279 aa		4.02	□□□□□ -1.77
RRP5	YMR229C	SEN54	Q02825	467 aa	Predicted RBP	4.02	□□□□□ -1.77
RRP5	YMR229C	RIA1	P53893	1110 aa		4.02	□□□□□ -1.77
RRP5	YMR229C	NUP157	P40064	1391 aa	Known RBP	4.02	□□□□□ -1.77
RRP5	YMR229C	CDC45	Q08032	650 aa		4.02	□□□□□ -1.77
RRP5	YMR229C	YGL081W	P53156	320 aa		4.01	□□□□□ -1.77
RRP5	YMR229C	KAR2	P16474	682 aa	Known RBP	4.01	□□□□□ -1.77
RRP5	YMR229C	TIF4632	P39936	914 aa	Known RBP	4.01	□□□□□ -1.77
RRP5	YMR229C	SSK2	P53599	1579 aa		4	□□□□□ -1.77
RRP5	YMR229C	CFT1	Q06632	1357 aa	Known RBP	4	□□□□□ -1.77
RRP5	YMR229C	TOP1	P04786	769 aa		4	□□□□□ -1.77
RRP5	YMR229C	TRM3	Q07527	1436 aa		4	□□□□□ -1.77
RRP5	YMR229C	YDL144C	Q07589	356 aa		3.99	□□□□□ -1.77
RRP5	YMR229C	NUP159	P40477	1460 aa		3.99	□□□□□ -1.77
RRP5	YMR229C	MET5	P47169	1442 aa		3.99	□□□□□ -1.77
RRP5	YMR229C	SPT5	P27692	1063 aa	Known RBP	3.99	□□□□□ -1.77
RRP5	YMR229C	YFR006W	P43590	535 aa		3.99	□□□□□ -1.77
RRP5	YMR229C	DAL5	P15365	543 aa		3.99	□□□□□ -1.77
RRP5	YMR229C	VPS27	P40343	622 aa	Known RBP	3.99	□□□□□ -1.77
RRP5	YMR229C	MAK21	Q12176	1025 aa	Known RBP	3.99	□□□□□ -1.77
RRP5	YMR229C	CAT8	P39113	1433 aa		3.99	□□□□□ -1.77
RRP5	YMR229C	RTR1	P40084	226 aa	Predicted RBP	3.98	□□□□□ -1.77
RRP5	YMR229C	YCF1	P39109	1515 aa	Known RBP	3.98	□□□□□ -1.77
RRP5	YMR229C	MYO4	P32492	1471 aa		3.98	□□□□□ -1.77
RRP5	YMR229C	SSM4	P40318	1319 aa		3.98	□□□□□ -1.77
RRP5	YMR229C	MHP1	P43638	1398 aa		3.98	□□□□□ -1.77
RRP5	YMR229C	DMA1	P38823	416 aa		3.98	□□□□□ -1.77
RRP5	YMR229C	ATG13	Q06628	738 aa		3.97	□□□□□ -1.77
RRP5	YMR229C	PDI1	P17967	522 aa	Known RBP	3.97	□□□□□ -1.77
RRP5	YMR229C	MDG1	P53885	366 aa		3.97	□□□□□ -1.77
RRP5	YMR229C	MAK10	Q02197	733 aa		3.97	□□□□□ -1.77
RRP5	YMR229C	CLB5	P30283	435 aa		3.97	□□□□□ -1.77
RRP5	YMR229C	CSE4	P36012	229 aa		3.97	□□□□□ -1.77
RRP5	YMR229C	YPR148C	Q06523	435 aa		3.97	□□□□□ -1.77
RRP5	YMR229C	BUD3	P25558	1636 aa		3.96	□□□□□ -1.77
RRP5	YMR229C	TY1B-DR4	Q07793	1604 aa		3.96	□□□□□ -1.77
RRP5	YMR229C	VPS24	P36095	224 aa	Known RBP	3.96	□□□□□ -1.77
RRP5	YMR229C	HUL5	P53119	910 aa		3.96	□□□□□ -1.77
RRP5	YMR229C	UGA2	P38067	497 aa		3.96	□□□□□ -1.78
RRP5	YMR229C	YPK9	Q12697	1472 aa		3.96	□□□□□ -1.78
RRP5	YMR229C	JIP3	O13555	125 aa		3.96	□□□□□ -1.78
RRP5	YMR229C	CHZ1	P40019	153 aa	Predicted RBP	3.95	□□□□□ -1.78
RRP5	YMR229C	ALD3	P54114	506 aa		3.95	□□□□□ -1.78
RRP5	YMR229C	HPC2	Q01448	625 aa		3.95	□□□□□ -1.78
RRP5	YMR229C	PKH1	Q03407	766 aa		3.95	□□□□□ -1.78
RRP5	YMR229C	SRB8	P25648	1427 aa		3.95	□□□□□ -1.78
RRP5	YMR229C	SCC2	Q04002	1493 aa		3.95	□□□□□ -1.78
RRP5	YMR229C	YEF3	P16521	1044 aa	Known RBP	3.95	□□□□□ -1.78
RRP5	YMR229C	BUD27	P43573	796 aa	Known RBP RIP-Chip data	3.95	□□□□□ -1.78	not detected
RRP5	YMR229C	NCB2	Q92317	146 aa		3.95	□□□□□ -1.78
RRP5	YMR229C	SPE2	P21182	396 aa		3.94	□□□□□ -1.78
RRP5	YMR229C	SAP155	P43612	1002 aa		3.94	□□□□□ -1.78
RRP5	YMR229C	NOP58	Q12499	511 aa	Known RBP	3.94	□□□□□ -1.78
RRP5	YMR229C	MFT1	P33441	392 aa	Known RBP	3.94	□□□□□ -1.78
RRP5	YMR229C	NSE3	Q05541	303 aa		3.94	□□□□□ -1.78
RRP5	YMR229C	MIC60	P36112	540 aa		3.94	□□□□□ -1.78
RRP5	YMR229C	TSC11	P40061	1430 aa		3.94	□□□□□ -1.78
RRP5	YMR229C	DJP1	P40564	432 aa		3.94	□□□□□ -1.78
RRP5	YMR229C	PRS1	P32895	427 aa	Known RBP	3.93	□□□□□ -1.78
RRP5	YMR229C	ECM16	Q04217	1267 aa	Known RBP	3.93	□□□□□ -1.78
RRP5	YMR229C	GEA1	P47102	1408 aa	Predicted RBP	3.93	□□□□□ -1.78
RRP5	YMR229C	BDP1	P46678	594 aa		3.93	□□□□□ -1.78
RRP5	YMR229C	GRX4	P32642	244 aa		3.93	□□□□□ -1.78
RRP5	YMR229C	RKR1	Q04781	1562 aa		3.93	□□□□□ -1.78
RRP5	YMR229C	PUF6	Q04373	656 aa	Known RBP	3.92	□□□□□ -1.78
RRP5	YMR229C	SVF1	Q05515	481 aa		3.92	□□□□□ -1.78
RRP5	YMR229C	SEC20	P28791	383 aa		3.92	□□□□□ -1.78
RRP5	YMR229C	VPS15	P22219	1454 aa		3.92	□□□□□ -1.78
RRP5	YMR229C	ALD2	P47771	506 aa		3.92	□□□□□ -1.78
RRP5	YMR229C	IRC3	Q06683	689 aa		3.92	□□□□□ -1.78
RRP5	YMR229C	TPM2	P40414	161 aa		3.92	□□□□□ -1.78
RRP5	YMR229C	PDR10	P51533	1564 aa		3.91	□□□□□ -1.78
RRP5	YMR229C	ARL1	P38116	183 aa	Known RBP	3.91	□□□□□ -1.78
RRP5	YMR229C	TAF8	Q03750	510 aa		3.91	□□□□□ -1.78
RRP5	YMR229C	DIP2	Q12220	943 aa	Predicted RBP	3.91	□□□□□ -1.78
RRP5	YMR229C	RLF2	Q12495	606 aa		3.91	□□□□□ -1.78
RRP5	YMR229C	IQG1	Q12280	1495 aa		3.91	□□□□□ -1.78
RRP5	YMR229C	RPP0	P05317	312 aa	Known RBP	3.91	□□□□□ -1.78
RRP5	YMR229C	ITC1	P53125	1264 aa		3.91	□□□□□ -1.78
RRP5	YMR229C	YBR287W	P38355	427 aa		3.91	□□□□□ -1.78
RRP5	YMR229C	RRP8	P38961	392 aa	Known RBP	3.91	□□□□□ -1.78
RRP5	YMR229C	RPS9B	P05755	195 aa	Known RBP	3.91	□□□□□ -1.78
RRP5	YMR229C	MPP10	P47083	593 aa	Known RBP	3.91	□□□□□ -1.78
RRP5	YMR229C	ARP5	P53946	755 aa		3.91	□□□□□ -1.78
RRP5	YMR229C	TCB1	Q12466	1186 aa		3.91	□□□□□ -1.78
RRP5	YMR229C	TPD3	P31383	635 aa		3.9	□□□□□ -1.78
RRP5	YMR229C	NMD2	P38798	1089 aa	Known RBP	3.9	□□□□□ -1.78
RRP5	YMR229C	YPP1	P46951	817 aa		3.9	□□□□□ -1.78
RRP5	YMR229C	PEX14	P53112	341 aa		3.9	□□□□□ -1.78
RRP5	YMR229C	RVB2	Q12464	471 aa	Known RBP	3.9	□□□□□ -1.78
RRP5	YMR229C	YOR1	P53049	1477 aa		3.9	□□□□□ -1.78

Retrieved 100 of 5,963 RNA–protein pairs in 64.3 ms