RNA–Protein interactions for RNA: YMR139W

RIM11, Transcript of Protein kinase, yeastyeast

Gene RIM11, Length 1,113 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RIM11YMR139W CHL1P22516 861 aaPredicted RBP9.02□□□□□ -0.97
RIM11YMR139W ABP1P15891 592 aaKnown RBP9.01□□□□□ -0.97
RIM11YMR139W PRE3P38624 215 aa8.98□□□□□ -0.97
RIM11YMR139W PTC4P38089 393 aa8.97□□□□□ -0.97
RIM11YMR139W YEL023CP39992 682 aa8.97□□□□□ -0.97
RIM11YMR139W VRP1P37370 817 aa8.85□□□□□ -0.99
RIM11YMR139W PML39Q03760 334 aa8.83□□□□□ -1
RIM11YMR139W ELP4Q02884 456 aaKnown RBP8.82□□□□□ -1
RIM11YMR139W YDR344CQ05510 147 aa8.81□□□□□ -1
RIM11YMR139W GRE2Q12068 342 aaKnown RBP8.81□□□□□ -1
RIM11YMR139W XDJ1P39102 459 aa8.79□□□□□ -1
RIM11YMR139W MIF2P35201 549 aa8.75□□□□□ -1.01
RIM11YMR139W ATH1P48016 1211 aa8.73□□□□□ -1.01
RIM11YMR139W DPS1P04802 557 aaKnown RBP8.69□□□□□ -1.02
RIM11YMR139W MID1P41821 548 aa8.68□□□□□ -1.02
RIM11YMR139W GUT1P32190 709 aa8.66□□□□□ -1.02
RIM11YMR139W PTC3P34221 468 aaKnown RBP8.65□□□□□ -1.02
RIM11YMR139W ARH1P48360 493 aa8.65□□□□□ -1.02
RIM11YMR139W PEX29Q03370 554 aa8.64□□□□□ -1.03
RIM11YMR139W EDS1P38073 919 aa8.63□□□□□ -1.03
RIM11YMR139W MAK11P20484 414 aaKnown RBP8.62□□□□□ -1.03
RIM11YMR139W SPT23P35210 1082 aa8.58□□□□□ -1.04
RIM11YMR139W RAM2P29703 316 aa8.57□□□□□ -1.04
RIM11YMR139W NST1P53935 1240 aa8.55□□□□□ -1.04
RIM11YMR139W SOL3P38858 249 aa8.54□□□□□ -1.04
RIM11YMR139W COQ8P27697 501 aa8.53□□□□□ -1.04
RIM11YMR139W HAP5Q02516 242 aa8.51□□□□□ -1.05
RIM11YMR139W MPH3P0CE00 602 aa8.5□□□□□ -1.05
RIM11YMR139W AI4P03878 556 aa8.49□□□□□ -1.05
RIM11YMR139W PTC2P39966 464 aaKnown RBP8.46□□□□□ -1.06
RIM11YMR139W ILV3P39522 585 aaKnown RBP8.45□□□□□ -1.06
RIM11YMR139W BNI4P53858 892 aa8.44□□□□□ -1.06
RIM11YMR139W SRC1Q03707 834 aa8.41□□□□□ -1.06
RIM11YMR139W YML082WQ04533 649 aaKnown RBP8.4□□□□□ -1.06
RIM11YMR139W MPC54Q08550 464 aa8.4□□□□□ -1.06
RIM11YMR139W YGR273CP53329 174 aa8.38□□□□□ -1.07
RIM11YMR139W NMA111P53920 997 aa8.37□□□□□ -1.07
RIM11YMR139W SLI15P38283 698 aa8.31□□□□□ -1.08
RIM11YMR139W DPL1Q05567 589 aa8.3□□□□□ -1.08
RIM11YMR139W RAS1P01119 309 aa8.29□□□□□ -1.08
RIM11YMR139W RGA2Q06407 1009 aa8.27□□□□□ -1.09
RIM11YMR139W NOP53Q12080 455 aaKnown RBP8.27□□□□□ -1.09
RIM11YMR139W YPR015CQ12531 247 aa8.24□□□□□ -1.09
RIM11YMR139W RGA1P39083 1007 aa8.23□□□□□ -1.09
RIM11YMR139W GYP1Q08484 637 aa8.22□□□□□ -1.09
RIM11YMR139W ISU2Q12056 156 aa8.2□□□□□ -1.1
RIM11YMR139W KEX1P09620 729 aa8.16□□□□□ -1.1
RIM11YMR139W RAM1P22007 431 aa8.16□□□□□ -1.1
RIM11YMR139W CDC73Q06697 393 aa8.15□□□□□ -1.1
RIM11YMR139W AMS1P22855 1083 aa8.13□□□□□ -1.11
RIM11YMR139W TRK1P12685 1235 aa8.12□□□□□ -1.11
RIM11YMR139W PDR1P12383 1068 aa8.11□□□□□ -1.11
RIM11YMR139W VHR2P40041 505 aa8.05□□□□□ -1.12
RIM11YMR139W SAS4Q04003 481 aa8.04□□□□□ -1.12
RIM11YMR139W YLR326WQ06170 240 aaKnown RBP8.03□□□□□ -1.12
RIM11YMR139W SDH2P21801 266 aa8.02□□□□□ -1.13
RIM11YMR139W UBP14P38237 781 aaKnown RBP8.01□□□□□ -1.13
RIM11YMR139W YEL077CQ3E7X8 1277 aa8.01□□□□□ -1.13
RIM11YMR139W PCS60P38137 543 aaKnown RBP RIP-Chip data7.99□□□□□ -1.13not detected
RIM11YMR139W RPP1BP10622 106 aaKnown RBP7.98□□□□□ -1.13
RIM11YMR139W RAD54P32863 898 aa7.98□□□□□ -1.13
RIM11YMR139W SET1P38827 1080 aaKnown RBP7.98□□□□□ -1.13
RIM11YMR139W MRF1P30775 413 aaPredicted RBP7.96□□□□□ -1.14
RIM11YMR139W PEX21P50091 288 aa7.91□□□□□ -1.14
RIM11YMR139W BUD20Q08004 166 aaPredicted RBP7.91□□□□□ -1.14
RIM11YMR139W YRR1Q12172 810 aa7.91□□□□□ -1.14
RIM11YMR139W PRT1P06103 763 aaKnown RBP7.89□□□□□ -1.15
RIM11YMR139W KIC1P38692 1080 aa7.87□□□□□ -1.15
RIM11YMR139W ERG12P07277 443 aa7.86□□□□□ -1.15
RIM11YMR139W YPL062WQ02781 134 aa7.86□□□□□ -1.15
RIM11YMR139W GAR1P28007 205 aaKnown RBP7.83□□□□□ -1.16
RIM11YMR139W AIR1P40507 360 aaKnown RBP7.83□□□□□ -1.16
RIM11YMR139W STR2P47164 639 aa7.83□□□□□ -1.16
RIM11YMR139W GBP2P25555 427 aaKnown RBP RIP-Chip data7.82□□□□□ -1.16not detected
RIM11YMR139W ISM1P48526 1002 aa7.82□□□□□ -1.16
RIM11YMR139W BRE2P43132 505 aa7.81□□□□□ -1.16
RIM11YMR139W TUM1Q08686 304 aaKnown RBP7.81□□□□□ -1.16
RIM11YMR139W NUD1P32336 851 aa7.8□□□□□ -1.16
RIM11YMR139W GCR2Q01722 534 aa7.8□□□□□ -1.16
RIM11YMR139W YDR090CQ03193 310 aa7.8□□□□□ -1.16
RIM11YMR139W NPL4P33755 580 aa7.79□□□□□ -1.16
RIM11YMR139W CST6P40535 587 aa7.78□□□□□ -1.16
RIM11YMR139W CLA4P48562 842 aa7.78□□□□□ -1.16
RIM11YMR139W GCD11P32481 527 aaKnown RBP7.76□□□□□ -1.17
RIM11YMR139W CSC1Q06538 782 aa7.76□□□□□ -1.17
RIM11YMR139W TFB4Q12004 338 aa7.76□□□□□ -1.17
RIM11YMR139W SPT16P32558 1035 aaKnown RBP7.75□□□□□ -1.17
RIM11YMR139W IFH1P39520 1085 aa7.73□□□□□ -1.17
RIM11YMR139W FRK1Q03002 865 aaPredicted RBP7.73□□□□□ -1.17
RIM11YMR139W GAP1P19145 602 aaPredicted RBP7.72□□□□□ -1.17
RIM11YMR139W LAM6Q08001 693 aa7.7□□□□□ -1.18
RIM11YMR139W SEC2P17065 759 aa7.68□□□□□ -1.18
RIM11YMR139W TY1A-DR4O74302 440 aa7.67□□□□□ -1.18
RIM11YMR139W TY1A-HP0C2I4 478 aaKnown RBP7.67□□□□□ -1.18
RIM11YMR139W TY1A-AP0CX57 440 aa7.67□□□□□ -1.18
RIM11YMR139W TY1A-PR1P0CX58 440 aa7.67□□□□□ -1.18
RIM11YMR139W TY1A-ORP0CX59 440 aa7.67□□□□□ -1.18
RIM11YMR139W TY1A-PR2P0CX60 440 aa7.67□□□□□ -1.18
RIM11YMR139W TY1A-DR5P0CX65 440 aa7.67□□□□□ -1.18
RIM11YMR139W TY1A-ER2P0CX66 440 aa7.67□□□□□ -1.18
Retrieved 100 of 5,963 RNA–protein pairs in 25.9 ms