RNA–Protein interactions for RNA: YMR045C

YMR045C, Transcript of Retrotransposon TYA Gag and TYB Pol genes, yeastyeast

Gene YMR045C, Length 5,268 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YMR045CYMR045C RED1P14291 827 aa2.36□□□□□ -2.03
YMR045CYMR045C NPL6P32832 435 aa2.36□□□□□ -2.03
YMR045CYMR045C CAB3P36076 571 aa2.36□□□□□ -2.03
YMR045CYMR045C RTF1P53064 558 aa2.36□□□□□ -2.03
YMR045CYMR045C YEL1P34225 687 aa2.36□□□□□ -2.03
YMR045CYMR045C LDH1P38139 375 aa2.36□□□□□ -2.03
YMR045CYMR045C YLF2P38746 405 aa2.36□□□□□ -2.03
YMR045CYMR045C DPB3P27344 201 aa2.35□□□□□ -2.03
YMR045CYMR045C PET100P38958 111 aa2.35□□□□□ -2.03
YMR045CYMR045C NOC3Q07896 663 aaPredicted RBP2.35□□□□□ -2.03
YMR045CYMR045C ESC2Q06340 456 aa2.35□□□□□ -2.03
YMR045CYMR045C UTP9P38882 575 aaKnown RBP2.35□□□□□ -2.03
YMR045CYMR045C MGR3Q04472 501 aa2.35□□□□□ -2.03
YMR045CYMR045C PAF1P38351 445 aa2.34□□□□□ -2.03
YMR045CYMR045C UTP4Q06679 776 aaKnown RBP2.34□□□□□ -2.03
YMR045CYMR045C HSP82P02829 709 aaKnown RBP2.34□□□□□ -2.03
YMR045CYMR045C DSF2P38213 736 aa2.34□□□□□ -2.03
YMR045CYMR045C TOA1P32773 286 aa2.34□□□□□ -2.03
YMR045CYMR045C RSM25P40496 264 aa2.34□□□□□ -2.03
YMR045CYMR045C EAF7P53911 425 aaKnown RBP2.34□□□□□ -2.03
YMR045CYMR045C KAR2P16474 682 aaKnown RBP2.34□□□□□ -2.04
YMR045CYMR045C YFR016CP43597 1233 aaKnown RBP2.34□□□□□ -2.04
YMR045CYMR045C MCM1P11746 286 aa2.33□□□□□ -2.04
YMR045CYMR045C YBR238CP38330 731 aaKnown RBP2.33□□□□□ -2.04
YMR045CYMR045C HOS4P40480 1083 aa2.33□□□□□ -2.04
YMR045CYMR045C SAM3Q08986 587 aa2.33□□□□□ -2.04
YMR045CYMR045C PLP2Q12017 286 aa2.33□□□□□ -2.04
YMR045CYMR045C RRN3P36070 627 aa2.33□□□□□ -2.04
YMR045CYMR045C SMY2P32909 740 aaKnown RBP2.33□□□□□ -2.04
YMR045CYMR045C SAP190P36123 1033 aa2.33□□□□□ -2.04
YMR045CYMR045C SUP35P05453 685 aaKnown RBP2.33□□□□□ -2.04
YMR045CYMR045C PUS4P48567 403 aaKnown RBP2.32□□□□□ -2.04
YMR045CYMR045C VPS9P54787 451 aa2.32□□□□□ -2.04
YMR045CYMR045C YLH47Q06493 454 aa2.32□□□□□ -2.04
YMR045CYMR045C QCR6P00127 147 aa2.32□□□□□ -2.04
YMR045CYMR045C BIK1P11709 440 aa2.32□□□□□ -2.04
YMR045CYMR045C CYC8P14922 966 aa2.32□□□□□ -2.04
YMR045CYMR045C ARP8Q12386 881 aaKnown RBP RIP-Chip data2.32□□□□□ -2.04not detected
YMR045CYMR045C CAJ1P39101 391 aa2.32□□□□□ -2.04
YMR045CYMR045C LEM3P42838 414 aa2.32□□□□□ -2.04
YMR045CYMR045C SET2P46995 733 aaKnown RBP2.32□□□□□ -2.04
YMR045CYMR045C YLL058WQ12198 575 aa2.32□□□□□ -2.04
YMR045CYMR045C GDT1P38301 280 aaPredicted RBP2.31□□□□□ -2.04
YMR045CYMR045C YPP1P46951 817 aa2.31□□□□□ -2.04
YMR045CYMR045C UTP14Q04500 899 aaKnown RBP2.31□□□□□ -2.04
YMR045CYMR045C MDM38Q08179 573 aa2.31□□□□□ -2.04
YMR045CYMR045C LOC1P43586 204 aaPredicted RBP2.31□□□□□ -2.04
YMR045CYMR045C MSB4Q12317 492 aa2.31□□□□□ -2.04
YMR045CYMR045C NIP1P32497 812 aaKnown RBP2.31□□□□□ -2.04
YMR045CYMR045C VTC4P47075 721 aa2.31□□□□□ -2.04
YMR045CYMR045C AAD16Q02895 342 aa2.31□□□□□ -2.04
YMR045CYMR045C DID4P36108 232 aa2.31□□□□□ -2.04
YMR045CYMR045C NST1P53935 1240 aa2.31□□□□□ -2.04
YMR045CYMR045C UBP1P25037 809 aa2.3□□□□□ -2.04
YMR045CYMR045C MFT1P33441 392 aaKnown RBP2.3□□□□□ -2.04
YMR045CYMR045C BUB1P41695 1021 aaKnown RBP RIP-Chip data2.3□□□□□ -2.04not detected
YMR045CYMR045C SWI6P09959 803 aa2.3□□□□□ -2.04
YMR045CYMR045C MGM1P32266 881 aa2.3□□□□□ -2.04
YMR045CYMR045C MNR2P35724 969 aa2.3□□□□□ -2.04
YMR045CYMR045C SNF7P39929 240 aaKnown RBP2.3□□□□□ -2.04
YMR045CYMR045C RIX7Q07844 837 aaKnown RBP2.3□□□□□ -2.04
YMR045CYMR045C GAP1P19145 602 aaPredicted RBP2.3□□□□□ -2.04
YMR045CYMR045C RPN2P32565 945 aaKnown RBP2.3□□□□□ -2.04
YMR045CYMR045C MCM16Q12262 181 aa2.3□□□□□ -2.04
YMR045CYMR045C SAP1P39955 897 aaKnown RBP2.29□□□□□ -2.04
YMR045CYMR045C ATG3P40344 310 aa2.29□□□□□ -2.04
YMR045CYMR045C ORC3P54790 616 aa2.29□□□□□ -2.04
YMR045CYMR045C RTP1Q12751 981 aa2.29□□□□□ -2.04
YMR045CYMR045C FUN30P31380 1131 aa2.29□□□□□ -2.04
YMR045CYMR045C PEA2P40091 420 aa2.29□□□□□ -2.04
YMR045CYMR045C PSE1P32337 1089 aaKnown RBP2.29□□□□□ -2.04
YMR045CYMR045C GCD11P32481 527 aaKnown RBP2.29□□□□□ -2.04
YMR045CYMR045C SSP1P38871 571 aa2.29□□□□□ -2.04
YMR045CYMR045C SSP120P39931 234 aaKnown RBP2.29□□□□□ -2.04
YMR045CYMR045C RKM2Q03942 479 aa2.29□□□□□ -2.04
YMR045CYMR045C GPN2Q08726 347 aaPredicted RBP2.29□□□□□ -2.04
YMR045CYMR045C MEI5P32489 222 aa2.28□□□□□ -2.04
YMR045CYMR045C RPP2BP02400 110 aaKnown RBP2.28□□□□□ -2.04
YMR045CYMR045C HEM3P28789 327 aa2.28□□□□□ -2.04
YMR045CYMR045C SWD1P39706 426 aa2.28□□□□□ -2.04
YMR045CYMR045C PUP2P32379 260 aa2.28□□□□□ -2.04
YMR045CYMR045C RGA1P39083 1007 aa2.28□□□□□ -2.04
YMR045CYMR045C ASI3P53983 676 aa2.28□□□□□ -2.04
YMR045CYMR045C CEF1Q03654 590 aaPredicted RBP2.28□□□□□ -2.04
YMR045CYMR045C ARD1P07347 238 aaPredicted RBP2.28□□□□□ -2.04
YMR045CYMR045C CLC1P17891 233 aa2.28□□□□□ -2.04
YMR045CYMR045C SKI2P35207 1287 aaKnown RBP RIP-Chip data2.28□□□□□ -2.04not detected
YMR045CYMR045C SAP155P43612 1002 aa2.28□□□□□ -2.04
YMR045CYMR045C ITC1P53125 1264 aa2.28□□□□□ -2.04
YMR045CYMR045C ATG13Q06628 738 aa2.28□□□□□ -2.04
YMR045CYMR045C GIN4Q12263 1142 aa2.28□□□□□ -2.04
YMR045CYMR045C RPP1BP10622 106 aaKnown RBP2.27□□□□□ -2.05
YMR045CYMR045C RPS0AP32905 252 aaKnown RBP2.27□□□□□ -2.05
YMR045CYMR045C VAM7P32912 316 aa2.27□□□□□ -2.05
YMR045CYMR045C PIM1P36775 1133 aa2.27□□□□□ -2.05
YMR045CYMR045C SPT2P06843 333 aaPredicted RBP2.27□□□□□ -2.05
YMR045CYMR045C IMP2'P32351 346 aa2.27□□□□□ -2.05
YMR045CYMR045C PIL1P53252 339 aaKnown RBP2.27□□□□□ -2.05
YMR045CYMR045C NOP15P53927 220 aaPredicted RBP2.27□□□□□ -2.05
YMR045CYMR045C MRD1Q06106 887 aaKnown RBP2.27□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 8.6 ms