RNA–Protein interactions for RNA: YLR175W

CBF5, Transcript of Pseudouridine synthase catalytic subunit of box H/ACA snoRNPs, yeastyeast

Gene CBF5, Length 1,452 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CBF5YLR175W VTH2P40890 1549 aa7.05□□□□□ -1.28
CBF5YLR175W MET5P47169 1442 aa7.02□□□□□ -1.29
CBF5YLR175W TRM732Q03496 1420 aa7.02□□□□□ -1.29
CBF5YLR175W SNQ2P32568 1501 aaKnown RBP7.02□□□□□ -1.29
CBF5YLR175W TY1B-JR2P47100 1755 aaKnown RBP7.02□□□□□ -1.29
CBF5YLR175W TY1B-ER2Q03619 1755 aa7.02□□□□□ -1.29
CBF5YLR175W TY1B-MR1Q04214 1755 aa7.02□□□□□ -1.29
CBF5YLR175W TY1B-MR2Q04670 1755 aaKnown RBP7.02□□□□□ -1.29
CBF5YLR175W TY1B-LR1Q12088 1755 aaKnown RBP7.02□□□□□ -1.29
CBF5YLR175W TY1B-NL1Q12112 1755 aa7.02□□□□□ -1.29
CBF5YLR175W TY1B-GR1Q12141 1755 aa7.02□□□□□ -1.29
CBF5YLR175W TY1B-BLQ12490 1755 aa7.02□□□□□ -1.29
CBF5YLR175W STH1P32597 1359 aa7.01□□□□□ -1.29
CBF5YLR175W TAF7Q05021 590 aa6.99□□□□□ -1.29
CBF5YLR175W SNT2P53127 1403 aa6.99□□□□□ -1.29
CBF5YLR175W SAS10Q12136 610 aaPredicted RBP6.97□□□□□ -1.29
CBF5YLR175W NTE1Q04958 1679 aa6.96□□□□□ -1.3
CBF5YLR175W NUP159P40477 1460 aa6.95□□□□□ -1.3
CBF5YLR175W MLP2P40457 1679 aa6.95□□□□□ -1.3
CBF5YLR175W RPO21P04050 1733 aaKnown RBP6.94□□□□□ -1.3
CBF5YLR175W SPT21P35209 758 aa6.93□□□□□ -1.3
CBF5YLR175W ULS1Q08562 1619 aa6.93□□□□□ -1.3
CBF5YLR175W PDR15Q04182 1529 aaKnown RBP6.93□□□□□ -1.3
CBF5YLR175W RIM101P33400 625 aa6.91□□□□□ -1.3
CBF5YLR175W GEA2P39993 1459 aaKnown RBP6.9□□□□□ -1.3
CBF5YLR175W YRF1-1P0CX20 1796 aa6.89□□□□□ -1.31
CBF5YLR175W YRF1-5P0CX21 1796 aa6.89□□□□□ -1.31
CBF5YLR175W YRF1-8P0CX22 1796 aa6.89□□□□□ -1.31
CBF5YLR175W TSR3Q12094 313 aaKnown RBP6.89□□□□□ -1.31
CBF5YLR175W LTE1P07866 1435 aa6.87□□□□□ -1.31
CBF5YLR175W GEA1P47102 1408 aaPredicted RBP6.87□□□□□ -1.31
CBF5YLR175W PDR12Q02785 1511 aa6.87□□□□□ -1.31
CBF5YLR175W IRC20Q06554 1556 aa6.86□□□□□ -1.31
CBF5YLR175W RTT106P40161 455 aa6.85□□□□□ -1.31
CBF5YLR175W VPS15P22219 1454 aa6.85□□□□□ -1.31
CBF5YLR175W MET10P39692 1035 aa6.85□□□□□ -1.31
CBF5YLR175W BUD31P25337 157 aaPredicted RBP6.84□□□□□ -1.31
CBF5YLR175W IFH1P39520 1085 aa6.82□□□□□ -1.32
CBF5YLR175W CAT8P39113 1433 aa6.81□□□□□ -1.32
CBF5YLR175W PTP3P40048 928 aa6.81□□□□□ -1.32
CBF5YLR175W TY3B-GQ99315 1547 aa6.81□□□□□ -1.32
CBF5YLR175W SPO14P36126 1683 aa6.8□□□□□ -1.32
CBF5YLR175W GDB1Q06625 1536 aa6.8□□□□□ -1.32
CBF5YLR175W PDR10P51533 1564 aa6.78□□□□□ -1.32
CBF5YLR175W NUP170P38181 1502 aa6.77□□□□□ -1.33
CBF5YLR175W IKI3Q06706 1349 aaKnown RBP6.77□□□□□ -1.33
CBF5YLR175W YBT1P32386 1661 aa6.77□□□□□ -1.33
CBF5YLR175W NUP157P40064 1391 aaKnown RBP6.77□□□□□ -1.33
CBF5YLR175W BNI1P41832 1953 aa6.74□□□□□ -1.33
CBF5YLR175W BUD3P25558 1636 aa6.73□□□□□ -1.33
CBF5YLR175W DRS2P39524 1355 aa6.73□□□□□ -1.33
CBF5YLR175W IQG1Q12280 1495 aa6.73□□□□□ -1.33
CBF5YLR175W ARO1P08566 1588 aaKnown RBP6.71□□□□□ -1.34
CBF5YLR175W SSP1P38871 571 aa6.71□□□□□ -1.34
CBF5YLR175W OXP1P28273 1286 aa6.69□□□□□ -1.34
CBF5YLR175W DMA1P38823 416 aa6.69□□□□□ -1.34
CBF5YLR175W ITT1Q04638 464 aa6.69□□□□□ -1.34
CBF5YLR175W TRM3Q07527 1436 aa6.69□□□□□ -1.34
CBF5YLR175W SRB8P25648 1427 aa6.68□□□□□ -1.34
CBF5YLR175W YSP2Q06681 1438 aa6.67□□□□□ -1.34
CBF5YLR175W SEC7P11075 2009 aaKnown RBP6.67□□□□□ -1.34
CBF5YLR175W DOP1Q03921 1698 aa6.67□□□□□ -1.34
CBF5YLR175W YKR023WP36119 530 aaKnown RBP6.66□□□□□ -1.34
CBF5YLR175W MMS1Q06211 1407 aa6.65□□□□□ -1.34
CBF5YLR175W CKB1P43639 278 aa6.65□□□□□ -1.35
CBF5YLR175W SSM4P40318 1319 aa6.65□□□□□ -1.35
CBF5YLR175W MRPL32P25348 183 aa6.64□□□□□ -1.35
CBF5YLR175W YIL055CP40523 627 aaKnown RBP6.62□□□□□ -1.35
CBF5YLR175W CHC1P22137 1653 aaKnown RBP6.61□□□□□ -1.35
CBF5YLR175W YAH1Q12184 172 aaKnown RBP6.61□□□□□ -1.35
CBF5YLR175W BNR1P40450 1375 aa6.6□□□□□ -1.35
CBF5YLR175W ARP8Q12386 881 aaKnown RBP RIP-Chip data6.6□□□□□ -1.35not detected
CBF5YLR175W BUD21Q08492 214 aaPredicted RBP6.57□□□□□ -1.36
CBF5YLR175W YLR271WQ06152 274 aa6.56□□□□□ -1.36
CBF5YLR175W DNF2Q12675 1612 aa6.56□□□□□ -1.36
CBF5YLR175W GCN2P15442 1659 aa6.53□□□□□ -1.36
CBF5YLR175W TFC8Q12308 588 aa6.53□□□□□ -1.36
CBF5YLR175W HOP09932 586 aa6.51□□□□□ -1.37
CBF5YLR175W RSM7P47150 247 aa6.51□□□□□ -1.37
CBF5YLR175W YOR093CQ12275 1648 aa6.48□□□□□ -1.37
CBF5YLR175W URN1Q06525 465 aaKnown RBP6.48□□□□□ -1.37
CBF5YLR175W PDR5P33302 1511 aaKnown RBP6.48□□□□□ -1.37
CBF5YLR175W NUP188P52593 1655 aaKnown RBP6.48□□□□□ -1.37
CBF5YLR175W YAP3P38749 330 aa6.47□□□□□ -1.37
CBF5YLR175W MGA2P40578 1113 aa6.47□□□□□ -1.37
CBF5YLR175W HAP1P0CE41 1502 aa6.46□□□□□ -1.38
CBF5YLR175W VMR1P38735 1592 aa6.46□□□□□ -1.38
CBF5YLR175W ABP1P15891 592 aaKnown RBP6.45□□□□□ -1.38
CBF5YLR175W CDC27P38042 758 aa6.45□□□□□ -1.38
CBF5YLR175W DCD1P06773 312 aa6.44□□□□□ -1.38
CBF5YLR175W IPL1P38991 367 aa6.43□□□□□ -1.38
CBF5YLR175W IML1P47170 1584 aa6.42□□□□□ -1.38
CBF5YLR175W DNF3Q12674 1656 aa6.41□□□□□ -1.38
CBF5YLR175W YGL015CP33199 130 aa6.41□□□□□ -1.38
CBF5YLR175W RAV1P47104 1357 aa6.4□□□□□ -1.38
CBF5YLR175W PDR11P40550 1411 aa6.4□□□□□ -1.38
CBF5YLR175W PAF1P38351 445 aa6.4□□□□□ -1.39
CBF5YLR175W NOP7P53261 605 aaKnown RBP6.38□□□□□ -1.39
CBF5YLR175W RTC1Q08281 1341 aa6.37□□□□□ -1.39
CBF5YLR175W AI2P03876 854 aa6.37□□□□□ -1.39
Retrieved 100 of 5,963 RNA–protein pairs in 13.3 ms