RNA–Protein interactions for RNA: YLL041C

SDH2, Transcript of Iron-sulfur protein subunit of succinate dehydrogenase, yeastyeast

Gene SDH2, Length 801 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SDH2YLL041C PTC4P38089 393 aa6.27□□□□□ -1.41
SDH2YLL041C CHL1P22516 861 aaPredicted RBP6.26□□□□□ -1.41
SDH2YLL041C BCK2P33306 851 aa6.25□□□□□ -1.41
SDH2YLL041C YEL023CP39992 682 aa6.25□□□□□ -1.41
SDH2YLL041C PRE3P38624 215 aa6.23□□□□□ -1.41
SDH2YLL041C GRE2Q12068 342 aaKnown RBP6.16□□□□□ -1.42
SDH2YLL041C PML39Q03760 334 aa6.14□□□□□ -1.43
SDH2YLL041C YDR344CQ05510 147 aa6.14□□□□□ -1.43
SDH2YLL041C MIF2P35201 549 aa6.12□□□□□ -1.43
SDH2YLL041C VRP1P37370 817 aa6.11□□□□□ -1.43
SDH2YLL041C MAK11P20484 414 aaKnown RBP6.1□□□□□ -1.43
SDH2YLL041C XDJ1P39102 459 aa6.1□□□□□ -1.43
SDH2YLL041C ATH1P48016 1211 aa6.1□□□□□ -1.43
SDH2YLL041C ELP4Q02884 456 aaKnown RBP6.1□□□□□ -1.43
SDH2YLL041C RAM2P29703 316 aa6.09□□□□□ -1.43
SDH2YLL041C GUT1P32190 709 aa6.09□□□□□ -1.43
SDH2YLL041C PTC3P34221 468 aaKnown RBP6.09□□□□□ -1.43
SDH2YLL041C EDS1P38073 919 aa6.09□□□□□ -1.43
SDH2YLL041C NST1P53935 1240 aa6.06□□□□□ -1.44
SDH2YLL041C MID1P41821 548 aa6.05□□□□□ -1.44
SDH2YLL041C ARH1P48360 493 aa6.05□□□□□ -1.44
SDH2YLL041C SOL3P38858 249 aa6.04□□□□□ -1.44
SDH2YLL041C COQ8P27697 501 aa6.02□□□□□ -1.45
SDH2YLL041C MPH3P0CE00 602 aa5.99□□□□□ -1.45
SDH2YLL041C AI4P03878 556 aa5.98□□□□□ -1.45
SDH2YLL041C DPS1P04802 557 aaKnown RBP5.98□□□□□ -1.45
SDH2YLL041C SPT23P35210 1082 aa5.98□□□□□ -1.45
SDH2YLL041C PEX29Q03370 554 aa5.97□□□□□ -1.45
SDH2YLL041C ILV3P39522 585 aaKnown RBP5.95□□□□□ -1.46
SDH2YLL041C HAP5Q02516 242 aa5.94□□□□□ -1.46
SDH2YLL041C YGR273CP53329 174 aa5.91□□□□□ -1.46
SDH2YLL041C BNI4P53858 892 aa5.91□□□□□ -1.46
SDH2YLL041C NOP53Q12080 455 aaKnown RBP5.91□□□□□ -1.46
SDH2YLL041C YML082WQ04533 649 aaKnown RBP5.9□□□□□ -1.46
SDH2YLL041C MPC54Q08550 464 aa5.89□□□□□ -1.47
SDH2YLL041C PTC2P39966 464 aaKnown RBP5.88□□□□□ -1.47
SDH2YLL041C NMA111P53920 997 aa5.86□□□□□ -1.47
SDH2YLL041C SLI15P38283 698 aa5.85□□□□□ -1.47
SDH2YLL041C SRC1Q03707 834 aa5.83□□□□□ -1.48
SDH2YLL041C DPL1Q05567 589 aa5.82□□□□□ -1.48
SDH2YLL041C YPR015CQ12531 247 aa5.78□□□□□ -1.48
SDH2YLL041C ISU2Q12056 156 aa5.77□□□□□ -1.49
SDH2YLL041C RAS1P01119 309 aa5.76□□□□□ -1.49
SDH2YLL041C KEX1P09620 729 aa5.76□□□□□ -1.49
SDH2YLL041C RAM1P22007 431 aa5.76□□□□□ -1.49
SDH2YLL041C CDC73Q06697 393 aa5.73□□□□□ -1.49
SDH2YLL041C UBP14P38237 781 aaKnown RBP5.7□□□□□ -1.5
SDH2YLL041C RGA2Q06407 1009 aa5.7□□□□□ -1.5
SDH2YLL041C YLR326WQ06170 240 aaKnown RBP5.69□□□□□ -1.5
SDH2YLL041C GYP1Q08484 637 aa5.69□□□□□ -1.5
SDH2YLL041C PDR1P12383 1068 aa5.68□□□□□ -1.5
SDH2YLL041C SET1P38827 1080 aaKnown RBP5.68□□□□□ -1.5
SDH2YLL041C RGA1P39083 1007 aa5.67□□□□□ -1.5
SDH2YLL041C AMS1P22855 1083 aa5.66□□□□□ -1.5
SDH2YLL041C PCS60P38137 543 aaKnown RBP RIP-Chip data5.66□□□□□ -1.5not detected
SDH2YLL041C VHR2P40041 505 aa5.66□□□□□ -1.5
SDH2YLL041C SAS4Q04003 481 aa5.65□□□□□ -1.5
SDH2YLL041C TRK1P12685 1235 aa5.63□□□□□ -1.51
SDH2YLL041C SDH2P21801 266 aa5.63□□□□□ -1.51
SDH2YLL041C RAD54P32863 898 aa5.62□□□□□ -1.51
SDH2YLL041C RPP1BP10622 106 aaKnown RBP5.6□□□□□ -1.51
SDH2YLL041C BUD20Q08004 166 aaPredicted RBP5.57□□□□□ -1.52
SDH2YLL041C YEL077CQ3E7X8 1277 aa5.57□□□□□ -1.52
SDH2YLL041C MRF1P30775 413 aaPredicted RBP5.56□□□□□ -1.52
SDH2YLL041C YDR090CQ03193 310 aa5.56□□□□□ -1.52
SDH2YLL041C YRR1Q12172 810 aa5.55□□□□□ -1.52
SDH2YLL041C PRT1P06103 763 aaKnown RBP5.54□□□□□ -1.52
SDH2YLL041C PEX21P50091 288 aa5.53□□□□□ -1.52
SDH2YLL041C GAP1P19145 602 aaPredicted RBP5.52□□□□□ -1.53
SDH2YLL041C KIC1P38692 1080 aa5.52□□□□□ -1.53
SDH2YLL041C STR2P47164 639 aa5.52□□□□□ -1.53
SDH2YLL041C ISM1P48526 1002 aa5.51□□□□□ -1.53
SDH2YLL041C CSC1Q06538 782 aa5.5□□□□□ -1.53
SDH2YLL041C TUM1Q08686 304 aaKnown RBP5.5□□□□□ -1.53
SDH2YLL041C TFB4Q12004 338 aa5.5□□□□□ -1.53
SDH2YLL041C IFH1P39520 1085 aa5.49□□□□□ -1.53
SDH2YLL041C ERG12P07277 443 aa5.48□□□□□ -1.53
SDH2YLL041C NUD1P32336 851 aa5.48□□□□□ -1.53
SDH2YLL041C REF2P42073 533 aaPredicted RBP5.47□□□□□ -1.53
SDH2YLL041C CST6P40535 587 aa5.45□□□□□ -1.54
SDH2YLL041C GCD11P32481 527 aaKnown RBP5.44□□□□□ -1.54
SDH2YLL041C NPL4P33755 580 aa5.44□□□□□ -1.54
SDH2YLL041C AIR1P40507 360 aaKnown RBP5.44□□□□□ -1.54
SDH2YLL041C YPL062WQ02781 134 aa5.44□□□□□ -1.54
SDH2YLL041C SEC2P17065 759 aa5.43□□□□□ -1.54
SDH2YLL041C ORC6P38826 435 aa5.43□□□□□ -1.54
SDH2YLL041C CLA4P48562 842 aa5.43□□□□□ -1.54
SDH2YLL041C YPR148CQ06523 435 aa5.43□□□□□ -1.54
SDH2YLL041C TY1A-DR4O74302 440 aa5.42□□□□□ -1.54
SDH2YLL041C TY1A-HP0C2I4 478 aaKnown RBP5.42□□□□□ -1.54
SDH2YLL041C TY1A-AP0CX57 440 aa5.42□□□□□ -1.54
SDH2YLL041C TY1A-PR1P0CX58 440 aa5.42□□□□□ -1.54
SDH2YLL041C TY1A-ORP0CX59 440 aa5.42□□□□□ -1.54
SDH2YLL041C TY1A-PR2P0CX60 440 aa5.42□□□□□ -1.54
SDH2YLL041C TY1A-DR5P0CX65 440 aa5.42□□□□□ -1.54
SDH2YLL041C TY1A-ER2P0CX66 440 aa5.42□□□□□ -1.54
SDH2YLL041C TY1A-GR3P0CX67 440 aa5.42□□□□□ -1.54
SDH2YLL041C TY1A-LR1P0CX68 440 aa5.42□□□□□ -1.54
SDH2YLL041C TY1A-MR2P0CX69 440 aa5.42□□□□□ -1.54
SDH2YLL041C BRE2P43132 505 aa5.42□□□□□ -1.54
Retrieved 100 of 5,963 RNA–protein pairs in 38 ms