RNA–Protein interactions for RNA: YKL017C

HCS1, Transcript of Hexameric DNA polymerase alpha-associated DNA helicase A, yeastyeast

Gene HCS1, Length 2,052 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HCS1YKL017C PTC4P38089 393 aa6.12□□□□□ -1.43
HCS1YKL017C CHL1P22516 861 aaPredicted RBP6.11□□□□□ -1.43
HCS1YKL017C BCK2P33306 851 aa6.1□□□□□ -1.43
HCS1YKL017C YEL023CP39992 682 aa6.1□□□□□ -1.43
HCS1YKL017C PRE3P38624 215 aa6.08□□□□□ -1.44
HCS1YKL017C GRE2Q12068 342 aaKnown RBP6.02□□□□□ -1.45
HCS1YKL017C PML39Q03760 334 aa5.99□□□□□ -1.45
HCS1YKL017C MIF2P35201 549 aa5.97□□□□□ -1.45
HCS1YKL017C MAK11P20484 414 aaKnown RBP5.96□□□□□ -1.46
HCS1YKL017C GUT1P32190 709 aa5.96□□□□□ -1.46
HCS1YKL017C VRP1P37370 817 aa5.96□□□□□ -1.46
HCS1YKL017C XDJ1P39102 459 aa5.96□□□□□ -1.46
HCS1YKL017C ATH1P48016 1211 aa5.96□□□□□ -1.46
HCS1YKL017C YDR344CQ05510 147 aa5.96□□□□□ -1.46
HCS1YKL017C PTC3P34221 468 aaKnown RBP5.95□□□□□ -1.46
HCS1YKL017C ELP4Q02884 456 aaKnown RBP5.95□□□□□ -1.46
HCS1YKL017C EDS1P38073 919 aa5.94□□□□□ -1.46
HCS1YKL017C RAM2P29703 316 aa5.94□□□□□ -1.46
HCS1YKL017C NST1P53935 1240 aa5.91□□□□□ -1.46
HCS1YKL017C ARH1P48360 493 aa5.9□□□□□ -1.46
HCS1YKL017C MID1P41821 548 aa5.89□□□□□ -1.47
HCS1YKL017C SOL3P38858 249 aa5.88□□□□□ -1.47
HCS1YKL017C COQ8P27697 501 aa5.87□□□□□ -1.47
HCS1YKL017C MPH3P0CE00 602 aa5.86□□□□□ -1.47
HCS1YKL017C AI4P03878 556 aa5.85□□□□□ -1.47
HCS1YKL017C SPT23P35210 1082 aa5.84□□□□□ -1.47
HCS1YKL017C DPS1P04802 557 aaKnown RBP5.83□□□□□ -1.48
HCS1YKL017C PEX29Q03370 554 aa5.83□□□□□ -1.48
HCS1YKL017C HAP5Q02516 242 aa5.8□□□□□ -1.48
HCS1YKL017C ILV3P39522 585 aaKnown RBP5.79□□□□□ -1.48
HCS1YKL017C NOP53Q12080 455 aaKnown RBP5.79□□□□□ -1.48
HCS1YKL017C BNI4P53858 892 aa5.78□□□□□ -1.48
HCS1YKL017C YGR273CP53329 174 aa5.77□□□□□ -1.49
HCS1YKL017C YML082WQ04533 649 aaKnown RBP5.76□□□□□ -1.49
HCS1YKL017C MPC54Q08550 464 aa5.75□□□□□ -1.49
HCS1YKL017C PTC2P39966 464 aaKnown RBP5.75□□□□□ -1.49
HCS1YKL017C NMA111P53920 997 aa5.72□□□□□ -1.49
HCS1YKL017C SLI15P38283 698 aa5.7□□□□□ -1.5
HCS1YKL017C DPL1Q05567 589 aa5.69□□□□□ -1.5
HCS1YKL017C SRC1Q03707 834 aa5.68□□□□□ -1.5
HCS1YKL017C ISU2Q12056 156 aa5.63□□□□□ -1.51
HCS1YKL017C KEX1P09620 729 aa5.63□□□□□ -1.51
HCS1YKL017C YPR015CQ12531 247 aa5.62□□□□□ -1.51
HCS1YKL017C RAS1P01119 309 aa5.61□□□□□ -1.51
HCS1YKL017C RAM1P22007 431 aa5.61□□□□□ -1.51
HCS1YKL017C CDC73Q06697 393 aa5.59□□□□□ -1.52
HCS1YKL017C GYP1Q08484 637 aa5.57□□□□□ -1.52
HCS1YKL017C UBP14P38237 781 aaKnown RBP5.56□□□□□ -1.52
HCS1YKL017C YLR326WQ06170 240 aaKnown RBP5.56□□□□□ -1.52
HCS1YKL017C SET1P38827 1080 aaKnown RBP5.55□□□□□ -1.52
HCS1YKL017C RGA2Q06407 1009 aa5.55□□□□□ -1.52
HCS1YKL017C AMS1P22855 1083 aa5.54□□□□□ -1.52
HCS1YKL017C RGA1P39083 1007 aa5.54□□□□□ -1.52
HCS1YKL017C PDR1P12383 1068 aa5.53□□□□□ -1.52
HCS1YKL017C VHR2P40041 505 aa5.52□□□□□ -1.53
HCS1YKL017C SAS4Q04003 481 aa5.52□□□□□ -1.53
HCS1YKL017C PCS60P38137 543 aaKnown RBP RIP-Chip data5.52□□□□□ -1.53not detected
HCS1YKL017C RAD54P32863 898 aa5.51□□□□□ -1.53
HCS1YKL017C RPP1BP10622 106 aaKnown RBP5.49□□□□□ -1.53
HCS1YKL017C TRK1P12685 1235 aa5.49□□□□□ -1.53
HCS1YKL017C SDH2P21801 266 aa5.49□□□□□ -1.53
HCS1YKL017C YEL077CQ3E7X8 1277 aa5.46□□□□□ -1.54
HCS1YKL017C MRF1P30775 413 aaPredicted RBP5.44□□□□□ -1.54
HCS1YKL017C YDR090CQ03193 310 aa5.43□□□□□ -1.54
HCS1YKL017C BUD20Q08004 166 aaPredicted RBP5.43□□□□□ -1.54
HCS1YKL017C YRR1Q12172 810 aa5.42□□□□□ -1.54
HCS1YKL017C PRT1P06103 763 aaKnown RBP5.41□□□□□ -1.54
HCS1YKL017C PEX21P50091 288 aa5.41□□□□□ -1.54
HCS1YKL017C KIC1P38692 1080 aa5.41□□□□□ -1.54
HCS1YKL017C GAP1P19145 602 aaPredicted RBP5.39□□□□□ -1.55
HCS1YKL017C IFH1P39520 1085 aa5.39□□□□□ -1.55
HCS1YKL017C STR2P47164 639 aa5.38□□□□□ -1.55
HCS1YKL017C CSC1Q06538 782 aa5.38□□□□□ -1.55
HCS1YKL017C TFB4Q12004 338 aa5.38□□□□□ -1.55
HCS1YKL017C ISM1P48526 1002 aa5.38□□□□□ -1.55
HCS1YKL017C ERG12P07277 443 aa5.36□□□□□ -1.55
HCS1YKL017C TUM1Q08686 304 aaKnown RBP5.36□□□□□ -1.55
HCS1YKL017C NUD1P32336 851 aa5.35□□□□□ -1.55
HCS1YKL017C REF2P42073 533 aaPredicted RBP5.35□□□□□ -1.55
HCS1YKL017C NPL4P33755 580 aa5.33□□□□□ -1.56
HCS1YKL017C YPR148CQ06523 435 aa5.32□□□□□ -1.56
HCS1YKL017C CST6P40535 587 aa5.32□□□□□ -1.56
HCS1YKL017C GCD11P32481 527 aaKnown RBP5.31□□□□□ -1.56
HCS1YKL017C ORC6P38826 435 aa5.31□□□□□ -1.56
HCS1YKL017C YPL062WQ02781 134 aa5.31□□□□□ -1.56
HCS1YKL017C AIR1P40507 360 aaKnown RBP5.3□□□□□ -1.56
HCS1YKL017C BRE2P43132 505 aa5.3□□□□□ -1.56
HCS1YKL017C TY1A-DR4O74302 440 aa5.29□□□□□ -1.56
HCS1YKL017C TY1A-HP0C2I4 478 aaKnown RBP5.29□□□□□ -1.56
HCS1YKL017C TY1A-AP0CX57 440 aa5.29□□□□□ -1.56
HCS1YKL017C TY1A-PR1P0CX58 440 aa5.29□□□□□ -1.56
HCS1YKL017C TY1A-ORP0CX59 440 aa5.29□□□□□ -1.56
HCS1YKL017C TY1A-PR2P0CX60 440 aa5.29□□□□□ -1.56
HCS1YKL017C TY1A-DR5P0CX65 440 aa5.29□□□□□ -1.56
HCS1YKL017C TY1A-ER2P0CX66 440 aa5.29□□□□□ -1.56
HCS1YKL017C TY1A-GR3P0CX67 440 aa5.29□□□□□ -1.56
HCS1YKL017C TY1A-LR1P0CX68 440 aa5.29□□□□□ -1.56
HCS1YKL017C TY1A-MR2P0CX69 440 aa5.29□□□□□ -1.56
HCS1YKL017C SEC2P17065 759 aa5.29□□□□□ -1.56
HCS1YKL017C SPT16P32558 1035 aaKnown RBP5.29□□□□□ -1.56
Retrieved 100 of 5,963 RNA–protein pairs in 76.2 ms