RNA–Protein interactions for RNA: YJL104W

PAM16, Transcript of Subunit of the import motor (PAM complex), yeastyeast

Gene PAM16, Length 450 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PAM16YJL104W CST9Q06032 482 aa6.69□□□□□ -1.34
PAM16YJL104W VRP1P37370 817 aa6.68□□□□□ -1.34
PAM16YJL104W PTC4P38089 393 aa6.68□□□□□ -1.34
PAM16YJL104W MGA2P40578 1113 aa6.68□□□□□ -1.34
PAM16YJL104W YEL023CP39992 682 aa6.66□□□□□ -1.34
PAM16YJL104W DCW1P36091 449 aa6.65□□□□□ -1.34
PAM16YJL104W RGA2Q06407 1009 aa6.65□□□□□ -1.34
PAM16YJL104W DPS1P04802 557 aaKnown RBP6.63□□□□□ -1.35
PAM16YJL104W RCR1P38212 213 aa6.59□□□□□ -1.35
PAM16YJL104W ELP4Q02884 456 aaKnown RBP6.58□□□□□ -1.36
PAM16YJL104W PML39Q03760 334 aa6.53□□□□□ -1.36
PAM16YJL104W YDR344CQ05510 147 aa6.52□□□□□ -1.37
PAM16YJL104W GRE2Q12068 342 aaKnown RBP6.52□□□□□ -1.37
PAM16YJL104W RGA1P39083 1007 aa6.5□□□□□ -1.37
PAM16YJL104W ARH1P48360 493 aa6.48□□□□□ -1.37
PAM16YJL104W ATH1P48016 1211 aa6.45□□□□□ -1.38
PAM16YJL104W SRC1Q03707 834 aa6.44□□□□□ -1.38
PAM16YJL104W GUT1P32190 709 aa6.42□□□□□ -1.38
PAM16YJL104W SPT23P35210 1082 aa6.42□□□□□ -1.38
PAM16YJL104W PEX29Q03370 554 aa6.42□□□□□ -1.38
PAM16YJL104W MIF2P35201 549 aa6.4□□□□□ -1.38
PAM16YJL104W MID1P41821 548 aa6.37□□□□□ -1.39
PAM16YJL104W MAK11P20484 414 aaKnown RBP6.36□□□□□ -1.39
PAM16YJL104W PTC3P34221 468 aaKnown RBP6.35□□□□□ -1.39
PAM16YJL104W HAP5Q02516 242 aa6.35□□□□□ -1.39
PAM16YJL104W AI4P03878 556 aa6.32□□□□□ -1.4
PAM16YJL104W BNI4P53858 892 aa6.32□□□□□ -1.4
PAM16YJL104W PTC2P39966 464 aaKnown RBP6.31□□□□□ -1.4
PAM16YJL104W NST1P53935 1240 aa6.31□□□□□ -1.4
PAM16YJL104W YML082WQ04533 649 aaKnown RBP6.31□□□□□ -1.4
PAM16YJL104W MPH3P0CE00 602 aa6.3□□□□□ -1.4
PAM16YJL104W EDS1P38073 919 aa6.3□□□□□ -1.4
PAM16YJL104W COQ8P27697 501 aa6.25□□□□□ -1.41
PAM16YJL104W SOL3P38858 249 aa6.24□□□□□ -1.41
PAM16YJL104W RAM2P29703 316 aa6.23□□□□□ -1.41
PAM16YJL104W MPC54Q08550 464 aa6.23□□□□□ -1.41
PAM16YJL104W RAS1P01119 309 aa6.21□□□□□ -1.42
PAM16YJL104W ILV3P39522 585 aaKnown RBP6.21□□□□□ -1.42
PAM16YJL104W NMA111P53920 997 aa6.18□□□□□ -1.42
PAM16YJL104W TRK1P12685 1235 aa6.17□□□□□ -1.42
PAM16YJL104W YGR273CP53329 174 aa6.17□□□□□ -1.42
PAM16YJL104W DPL1Q05567 589 aa6.15□□□□□ -1.42
PAM16YJL104W NOP53Q12080 455 aaKnown RBP6.15□□□□□ -1.42
PAM16YJL104W AMS1P22855 1083 aa6.12□□□□□ -1.43
PAM16YJL104W SLI15P38283 698 aa6.12□□□□□ -1.43
PAM16YJL104W GYP1Q08484 637 aa6.11□□□□□ -1.43
PAM16YJL104W YPL062WQ02781 134 aa6.09□□□□□ -1.43
PAM16YJL104W YPR015CQ12531 247 aa6.08□□□□□ -1.44
PAM16YJL104W ISU2Q12056 156 aa6.07□□□□□ -1.44
PAM16YJL104W RAM1P22007 431 aa6.04□□□□□ -1.44
PAM16YJL104W SAS4Q04003 481 aa6.04□□□□□ -1.44
PAM16YJL104W YEL077CQ3E7X8 1277 aa6.02□□□□□ -1.45
PAM16YJL104W KEX1P09620 729 aa6□□□□□ -1.45
PAM16YJL104W RPP1BP10622 106 aaKnown RBP5.97□□□□□ -1.45
PAM16YJL104W MRF1P30775 413 aaPredicted RBP5.97□□□□□ -1.45
PAM16YJL104W CDC73Q06697 393 aa5.96□□□□□ -1.46
PAM16YJL104W SDH2P21801 266 aa5.95□□□□□ -1.46
PAM16YJL104W PDR1P12383 1068 aa5.94□□□□□ -1.46
PAM16YJL104W GBP2P25555 427 aaKnown RBP RIP-Chip data5.92□□□□□ -1.46 RIP-Chip
PAM16YJL104W BRE2P43132 505 aa5.9□□□□□ -1.46
PAM16YJL104W GCR2Q01722 534 aa5.9□□□□□ -1.46
PAM16YJL104W GAR1P28007 205 aaKnown RBP5.89□□□□□ -1.47
PAM16YJL104W YLR326WQ06170 240 aaKnown RBP5.88□□□□□ -1.47
PAM16YJL104W RAD54P32863 898 aa5.87□□□□□ -1.47
PAM16YJL104W ERG12P07277 443 aa5.86□□□□□ -1.47
PAM16YJL104W PRT1P06103 763 aaKnown RBP5.85□□□□□ -1.47
PAM16YJL104W VHR2P40041 505 aa5.85□□□□□ -1.47
PAM16YJL104W PCS60P38137 543 aaKnown RBP RIP-Chip data5.84□□□□□ -1.47not detected
PAM16YJL104W UBP14P38237 781 aaKnown RBP5.84□□□□□ -1.47
PAM16YJL104W PEX21P50091 288 aa5.83□□□□□ -1.48
PAM16YJL104W BUD20Q08004 166 aaPredicted RBP5.81□□□□□ -1.48
PAM16YJL104W KIC1P38692 1080 aa5.79□□□□□ -1.48
PAM16YJL104W SET1P38827 1080 aaKnown RBP5.79□□□□□ -1.48
PAM16YJL104W YRR1Q12172 810 aa5.79□□□□□ -1.48
PAM16YJL104W AIR1P40507 360 aaKnown RBP5.78□□□□□ -1.48
PAM16YJL104W STR2P47164 639 aa5.77□□□□□ -1.49
PAM16YJL104W NPL4P33755 580 aa5.76□□□□□ -1.49
PAM16YJL104W TFB4Q12004 338 aa5.76□□□□□ -1.49
PAM16YJL104W NUD1P32336 851 aa5.75□□□□□ -1.49
PAM16YJL104W CST6P40535 587 aa5.75□□□□□ -1.49
PAM16YJL104W SPT16P32558 1035 aaKnown RBP5.74□□□□□ -1.49
PAM16YJL104W IFH1P39520 1085 aa5.74□□□□□ -1.49
PAM16YJL104W ISM1P48526 1002 aa5.74□□□□□ -1.49
PAM16YJL104W CSC1Q06538 782 aa5.74□□□□□ -1.49
PAM16YJL104W CDC4P07834 779 aa5.73□□□□□ -1.49
PAM16YJL104W LAM6Q08001 693 aa5.73□□□□□ -1.49
PAM16YJL104W MET22P32179 357 aa5.72□□□□□ -1.49
PAM16YJL104W CLA4P48562 842 aa5.72□□□□□ -1.49
PAM16YJL104W ENV9Q08651 330 aa5.71□□□□□ -1.5
PAM16YJL104W TUM1Q08686 304 aaKnown RBP5.71□□□□□ -1.5
PAM16YJL104W GAP1P19145 602 aaPredicted RBP5.7□□□□□ -1.5
PAM16YJL104W FRK1Q03002 865 aaPredicted RBP5.7□□□□□ -1.5
PAM16YJL104W PAT1P25644 796 aaKnown RBP5.68□□□□□ -1.5
PAM16YJL104W GCD11P32481 527 aaKnown RBP5.68□□□□□ -1.5
PAM16YJL104W YDR090CQ03193 310 aa5.68□□□□□ -1.5
PAM16YJL104W BDP1P46678 594 aa5.65□□□□□ -1.5
PAM16YJL104W YDR444WQ04093 687 aa5.65□□□□□ -1.5
PAM16YJL104W TY1A-DR4O74302 440 aa5.64□□□□□ -1.51
PAM16YJL104W TY1A-HP0C2I4 478 aaKnown RBP5.64□□□□□ -1.51
PAM16YJL104W TY1A-AP0CX57 440 aa5.64□□□□□ -1.51
Retrieved 100 of 5,963 RNA–protein pairs in 29.8 ms