RNA–Protein interactions for RNA: YJL047C

RTT101, Transcript of Cullin subunit of a Roc1p-dependent E3 ubiquitin ligase complex, yeastyeast

Gene RTT101, Length 2,529 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTT101YJL047C PAM1P37304 830 aaKnown RBP2.9□□□□□ -1.95
RTT101YJL047C PKC1P24583 1151 aa2.89□□□□□ -1.95
RTT101YJL047C YJL171CP46992 396 aa2.88□□□□□ -1.95
RTT101YJL047C HPC2Q01448 625 aa2.88□□□□□ -1.95
RTT101YJL047C GLN1P32288 370 aaKnown RBP2.88□□□□□ -1.95
RTT101YJL047C FKH1P40466 484 aa2.88□□□□□ -1.95
RTT101YJL047C TOP1P04786 769 aa2.87□□□□□ -1.95
RTT101YJL047C RGA2Q06407 1009 aa2.87□□□□□ -1.95
RTT101YJL047C SNU71P53207 620 aaKnown RBP2.87□□□□□ -1.95
RTT101YJL047C MET10P39692 1035 aa2.86□□□□□ -1.95
RTT101YJL047C BIM1P40013 344 aa2.86□□□□□ -1.95
RTT101YJL047C ATG32P40458 529 aa2.86□□□□□ -1.95
RTT101YJL047C RRN6P32786 894 aa2.86□□□□□ -1.95
RTT101YJL047C BRL1P38770 471 aa2.86□□□□□ -1.95
RTT101YJL047C ATG36P46983 293 aa2.86□□□□□ -1.95
RTT101YJL047C MAK21Q12176 1025 aaKnown RBP2.86□□□□□ -1.95
RTT101YJL047C ERG12P07277 443 aa2.85□□□□□ -1.95
RTT101YJL047C SEN54Q02825 467 aaPredicted RBP2.85□□□□□ -1.95
RTT101YJL047C SPP1Q03012 353 aa2.85□□□□□ -1.95
RTT101YJL047C LAM6Q08001 693 aa2.85□□□□□ -1.95
RTT101YJL047C YTA7P40340 1379 aa2.85□□□□□ -1.95
RTT101YJL047C MAK11P20484 414 aaKnown RBP2.85□□□□□ -1.95
RTT101YJL047C BBC1P47068 1157 aa2.85□□□□□ -1.95
RTT101YJL047C YJL007CP47080 104 aa2.85□□□□□ -1.95
RTT101YJL047C MRM1P25270 412 aa2.84□□□□□ -1.95
RTT101YJL047C CPS1P27614 576 aa2.84□□□□□ -1.96
RTT101YJL047C BRN1P38170 754 aa2.84□□□□□ -1.96
RTT101YJL047C VPS29P38759 282 aa2.84□□□□□ -1.96
RTT101YJL047C SSF1P38789 453 aaPredicted RBP2.84□□□□□ -1.96
RTT101YJL047C ATF2P53296 535 aa2.84□□□□□ -1.96
RTT101YJL047C SSA4P22202 642 aaKnown RBP2.83□□□□□ -1.96
RTT101YJL047C SLD2P34252 453 aa2.83□□□□□ -1.96
RTT101YJL047C SPC42P36094 363 aa2.83□□□□□ -1.96
RTT101YJL047C REF2P42073 533 aaPredicted RBP2.83□□□□□ -1.96
RTT101YJL047C NOB1Q08444 459 aaKnown RBP2.83□□□□□ -1.96
RTT101YJL047C OCA5P38738 679 aa2.83□□□□□ -1.96
RTT101YJL047C FAR11P53917 953 aa2.83□□□□□ -1.96
RTT101YJL047C COQ8P27697 501 aa2.82□□□□□ -1.96
RTT101YJL047C NSR1P27476 414 aaKnown RBP RIP-Chip data2.82□□□□□ -1.96not detected
RTT101YJL047C SWE1P32944 819 aa2.82□□□□□ -1.96
RTT101YJL047C YOR238WQ08634 303 aa2.82□□□□□ -1.96
RTT101YJL047C TIF1P10081 395 aaKnown RBP2.81□□□□□ -1.96
RTT101YJL047C CDC3P32457 520 aaKnown RBP2.81□□□□□ -1.96
RTT101YJL047C YML083CQ04526 418 aa2.81□□□□□ -1.96
RTT101YJL047C TTI1P36097 1038 aa2.81□□□□□ -1.96
RTT101YJL047C STS1P38637 319 aa2.81□□□□□ -1.96
RTT101YJL047C HEM3P28789 327 aa2.8□□□□□ -1.96
RTT101YJL047C YRB30P53107 440 aaPredicted RBP2.8□□□□□ -1.96
RTT101YJL047C RPL34AP87262 121 aaPredicted RBP2.8□□□□□ -1.96
RTT101YJL047C COX6P00427 148 aa2.8□□□□□ -1.96
RTT101YJL047C RTG3P38165 486 aa2.8□□□□□ -1.96
RTT101YJL047C NUG1P40010 520 aaKnown RBP2.8□□□□□ -1.96
RTT101YJL047C ALD4P46367 519 aaKnown RBP2.8□□□□□ -1.96
RTT101YJL047C DOS2P54858 310 aa2.8□□□□□ -1.96
RTT101YJL047C HAT1Q12341 374 aa2.8□□□□□ -1.96
RTT101YJL047C KTR1P27810 393 aaKnown RBP2.79□□□□□ -1.96
RTT101YJL047C BIO2P32451 375 aa2.79□□□□□ -1.96
RTT101YJL047C EDS1P38073 919 aa2.79□□□□□ -1.96
RTT101YJL047C YJR008WP47085 338 aa2.79□□□□□ -1.96
RTT101YJL047C YPR204WQ08995 1032 aa2.79□□□□□ -1.96
RTT101YJL047C BMT6Q12291 365 aa2.79□□□□□ -1.96
RTT101YJL047C CSN12P47130 423 aa2.79□□□□□ -1.96
RTT101YJL047C WSC3Q12215 556 aa2.79□□□□□ -1.96
RTT101YJL047C IPL1P38991 367 aa2.78□□□□□ -1.96
RTT101YJL047C ALD2P47771 506 aa2.78□□□□□ -1.96
RTT101YJL047C RTS3P53289 263 aa2.78□□□□□ -1.96
RTT101YJL047C SSA2P10592 639 aaKnown RBP2.77□□□□□ -1.97
RTT101YJL047C PUP1P25043 261 aa2.77□□□□□ -1.97
RTT101YJL047C TIF11P38912 153 aaKnown RBP2.77□□□□□ -1.97
RTT101YJL047C RPL34BP40525 121 aaKnown RBP2.77□□□□□ -1.97
RTT101YJL047C ITT1Q04638 464 aa2.77□□□□□ -1.97
RTT101YJL047C RTG2P32608 588 aaKnown RBP2.76□□□□□ -1.97
RTT101YJL047C UBP14P38237 781 aaKnown RBP2.76□□□□□ -1.97
RTT101YJL047C YDR090CQ03193 310 aa2.76□□□□□ -1.97
RTT101YJL047C RRP15Q06511 250 aaPredicted RBP2.76□□□□□ -1.97
RTT101YJL047C TYW1Q08960 810 aaKnown RBP2.76□□□□□ -1.97
RTT101YJL047C MIF2P35201 549 aa2.75□□□□□ -1.97
RTT101YJL047C CST6P40535 587 aa2.75□□□□□ -1.97
RTT101YJL047C YNL108CP53929 270 aa2.75□□□□□ -1.97
RTT101YJL047C KEX1P09620 729 aa2.75□□□□□ -1.97
RTT101YJL047C JSN1P47135 1091 aaKnown RBP RIP-Chip data2.75□□□□□ -1.97not detected
RTT101YJL047C YMR1P47147 688 aaKnown RBP RIP-Chip data2.75□□□□□ -1.97not detected
RTT101YJL047C TPO2P53283 614 aa2.75□□□□□ -1.97
RTT101YJL047C YAF9P53930 226 aa2.75□□□□□ -1.97
RTT101YJL047C ATE1P16639 503 aa2.74□□□□□ -1.97
RTT101YJL047C DBP1P24784 617 aaKnown RBP2.74□□□□□ -1.97
RTT101YJL047C YBL036CP38197 257 aa2.74□□□□□ -1.97
RTT101YJL047C YFR006WP43590 535 aa2.74□□□□□ -1.97
RTT101YJL047C FPR4Q06205 392 aaPredicted RBP2.74□□□□□ -1.97
RTT101YJL047C PIB1Q06651 286 aa2.74□□□□□ -1.97
RTT101YJL047C NOP53Q12080 455 aaKnown RBP2.74□□□□□ -1.97
RTT101YJL047C LDB19Q12502 818 aa2.74□□□□□ -1.97
RTT101YJL047C VHR2P40041 505 aa2.74□□□□□ -1.97
RTT101YJL047C YAP5P40574 245 aa2.74□□□□□ -1.97
RTT101YJL047C BUD21Q08492 214 aaPredicted RBP2.74□□□□□ -1.97
RTT101YJL047C NMD2P38798 1089 aaKnown RBP2.73□□□□□ -1.97
RTT101YJL047C RNH70P53331 553 aa2.73□□□□□ -1.97
RTT101YJL047C UBX5Q06682 500 aa2.73□□□□□ -1.97
RTT101YJL047C YBL113CQ7M4S9 792 aa2.73□□□□□ -1.97
RTT101YJL047C ENO1P00924 437 aaKnown RBP2.73□□□□□ -1.97
Retrieved 100 of 5,963 RNA–protein pairs in 71.9 ms