RNA–Protein interactions for RNA: YIL156W

UBP7, Transcript of Ubiquitin-specific protease that cleaves ubiquitin-protein fusions, yeastyeast

Gene UBP7, Length 3,216 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP7YIL156W COX6P00427 148 aa7.08□□□□□ -1.28
UBP7YIL156W KOG1P38873 1557 aa7.07□□□□□ -1.28
UBP7YIL156W SSA2P10592 639 aaKnown RBP7.06□□□□□ -1.28
UBP7YIL156W NOP53Q12080 455 aaKnown RBP7.06□□□□□ -1.28
UBP7YIL156W RRN6P32786 894 aa7.05□□□□□ -1.28
UBP7YIL156W EPS1P40557 701 aa7.04□□□□□ -1.28
UBP7YIL156W RPL34AP87262 121 aaPredicted RBP7.03□□□□□ -1.28
UBP7YIL156W CPS1P27614 576 aa7.03□□□□□ -1.28
UBP7YIL156W CDC3P32457 520 aaKnown RBP7.03□□□□□ -1.28
UBP7YIL156W ERG12P07277 443 aa7.02□□□□□ -1.29
UBP7YIL156W CSN12P47130 423 aa7.02□□□□□ -1.29
UBP7YIL156W SSF1P38789 453 aaPredicted RBP7.01□□□□□ -1.29
UBP7YIL156W SEN54Q02825 467 aaPredicted RBP7.01□□□□□ -1.29
UBP7YIL156W TIF1P10081 395 aaKnown RBP7.01□□□□□ -1.29
UBP7YIL156W HEM3P28789 327 aa7.01□□□□□ -1.29
UBP7YIL156W RPL34BP40525 121 aaKnown RBP7.01□□□□□ -1.29
UBP7YIL156W CDC27P38042 758 aa7.01□□□□□ -1.29
UBP7YIL156W TOP1P04786 769 aa6.99□□□□□ -1.29
UBP7YIL156W VPS29P38759 282 aa6.99□□□□□ -1.29
UBP7YIL156W NOB1Q08444 459 aaKnown RBP6.99□□□□□ -1.29
UBP7YIL156W MIF2P35201 549 aa6.99□□□□□ -1.29
UBP7YIL156W YTA7P40340 1379 aa6.99□□□□□ -1.29
UBP7YIL156W MRPL32P25348 183 aa6.99□□□□□ -1.29
UBP7YIL156W EDS1P38073 919 aa6.99□□□□□ -1.29
UBP7YIL156W TTI1P36097 1038 aa6.98□□□□□ -1.29
UBP7YIL156W BDF1P35817 686 aa6.97□□□□□ -1.29
UBP7YIL156W BRN1P38170 754 aa6.96□□□□□ -1.3
UBP7YIL156W UBP14P38237 781 aaKnown RBP6.96□□□□□ -1.3
UBP7YIL156W YPR204WQ08995 1032 aa6.96□□□□□ -1.3
UBP7YIL156W HAT1Q12341 374 aa6.94□□□□□ -1.3
UBP7YIL156W SWR1Q05471 1514 aa6.93□□□□□ -1.3
UBP7YIL156W RTG2P32608 588 aaKnown RBP6.92□□□□□ -1.3
UBP7YIL156W KTR1P27810 393 aaKnown RBP6.92□□□□□ -1.3
UBP7YIL156W BIO2P32451 375 aa6.91□□□□□ -1.3
UBP7YIL156W YBL036CP38197 257 aa6.91□□□□□ -1.3
UBP7YIL156W YDR090CQ03193 310 aa6.91□□□□□ -1.3
UBP7YIL156W SPC42P36094 363 aa6.91□□□□□ -1.3
UBP7YIL156W OCA5P38738 679 aa6.91□□□□□ -1.3
UBP7YIL156W YML083CQ04526 418 aa6.91□□□□□ -1.3
UBP7YIL156W URN1Q06525 465 aaKnown RBP6.91□□□□□ -1.3
UBP7YIL156W ITT1Q04638 464 aa6.89□□□□□ -1.31
UBP7YIL156W TCB3Q03640 1545 aaKnown RBP6.89□□□□□ -1.31
UBP7YIL156W VHR2P40041 505 aa6.89□□□□□ -1.31
UBP7YIL156W DOS2P54858 310 aa6.88□□□□□ -1.31
UBP7YIL156W INO80P53115 1489 aa6.88□□□□□ -1.31
UBP7YIL156W PSE1P32337 1089 aaKnown RBP6.88□□□□□ -1.31
UBP7YIL156W STS1P38637 319 aa6.88□□□□□ -1.31
UBP7YIL156W PUP1P25043 261 aa6.87□□□□□ -1.31
UBP7YIL156W FAR11P53917 953 aa6.87□□□□□ -1.31
UBP7YIL156W TYW1Q08960 810 aaKnown RBP6.87□□□□□ -1.31
UBP7YIL156W PTC3P34221 468 aaKnown RBP6.86□□□□□ -1.31
UBP7YIL156W YNL108CP53929 270 aa6.86□□□□□ -1.31
UBP7YIL156W IPL1P38991 367 aa6.86□□□□□ -1.31
UBP7YIL156W ASF1P32447 279 aa6.85□□□□□ -1.31
UBP7YIL156W YMR1P47147 688 aaKnown RBP RIP-Chip data6.85□□□□□ -1.31not detected
UBP7YIL156W ALD2P47771 506 aa6.83□□□□□ -1.32
UBP7YIL156W STM1P39015 273 aaKnown RBP6.83□□□□□ -1.32
UBP7YIL156W ATG36P46983 293 aa6.82□□□□□ -1.32
UBP7YIL156W TEA1P47988 759 aa6.82□□□□□ -1.32
UBP7YIL156W YLR326WQ06170 240 aaKnown RBP6.82□□□□□ -1.32
UBP7YIL156W YFR006WP43590 535 aa6.81□□□□□ -1.32
UBP7YIL156W ALD4P46367 519 aaKnown RBP6.81□□□□□ -1.32
UBP7YIL156W LAM6Q08001 693 aa6.81□□□□□ -1.32
UBP7YIL156W KIC1P38692 1080 aa6.81□□□□□ -1.32
UBP7YIL156W FPR4Q06205 392 aaPredicted RBP6.8□□□□□ -1.32
UBP7YIL156W DBP1P24784 617 aaKnown RBP6.8□□□□□ -1.32
UBP7YIL156W SUP45P12385 437 aaKnown RBP6.79□□□□□ -1.32
UBP7YIL156W NUG1P40010 520 aaKnown RBP6.79□□□□□ -1.32
UBP7YIL156W SEC20P28791 383 aa6.79□□□□□ -1.32
UBP7YIL156W CSE4P36012 229 aa6.79□□□□□ -1.32
UBP7YIL156W ENO1P00924 437 aaKnown RBP6.78□□□□□ -1.32
UBP7YIL156W YAF9P53930 226 aa6.78□□□□□ -1.32
UBP7YIL156W SIS2P36024 562 aa6.78□□□□□ -1.32
UBP7YIL156W NNF1P47149 201 aa6.78□□□□□ -1.32
UBP7YIL156W YBL113CQ7M4S9 792 aa6.78□□□□□ -1.32
UBP7YIL156W RAD59Q12223 238 aa6.77□□□□□ -1.33
UBP7YIL156W DNA2P38859 1522 aa6.77□□□□□ -1.33
UBP7YIL156W RRP15Q06511 250 aaPredicted RBP6.77□□□□□ -1.33
UBP7YIL156W TGL4P36165 910 aa6.76□□□□□ -1.33
UBP7YIL156W CST6P40535 587 aa6.76□□□□□ -1.33
UBP7YIL156W YRB30P53107 440 aaPredicted RBP6.76□□□□□ -1.33
UBP7YIL156W RTS3P53289 263 aa6.76□□□□□ -1.33
UBP7YIL156W NMD2P38798 1089 aaKnown RBP6.76□□□□□ -1.33
UBP7YIL156W SCY1P53009 804 aa6.76□□□□□ -1.33
UBP7YIL156W KEX1P09620 729 aa6.75□□□□□ -1.33
UBP7YIL156W MRX10Q05648 414 aa6.75□□□□□ -1.33
UBP7YIL156W ENO2P00925 437 aaKnown RBP6.75□□□□□ -1.33
UBP7YIL156W YJR008WP47085 338 aa6.74□□□□□ -1.33
UBP7YIL156W MSC6Q08818 692 aaKnown RBP6.74□□□□□ -1.33
UBP7YIL156W PKH3Q03306 898 aaPredicted RBP6.74□□□□□ -1.33
UBP7YIL156W ATE1P16639 503 aa6.74□□□□□ -1.33
UBP7YIL156W RAD54P32863 898 aa6.74□□□□□ -1.33
UBP7YIL156W ERP5P38819 212 aa6.74□□□□□ -1.33
UBP7YIL156W PCS60P38137 543 aaKnown RBP RIP-Chip data6.73□□□□□ -1.33not detected
UBP7YIL156W YDJ1P25491 409 aaKnown RBP6.73□□□□□ -1.33
UBP7YIL156W ORC6P38826 435 aa6.73□□□□□ -1.33
UBP7YIL156W POL32P47110 350 aa6.72□□□□□ -1.33
UBP7YIL156W HST2P53686 357 aa6.72□□□□□ -1.33
UBP7YIL156W SVF1Q05515 481 aa6.72□□□□□ -1.33
UBP7YIL156W SWE1P32944 819 aa6.72□□□□□ -1.33
Retrieved 100 of 5,963 RNA–protein pairs in 8.6 ms