RNA–Protein interactions for RNA: YIL138C

TPM2, Transcript of Minor isoform of tropomyosin, yeastyeast

Gene TPM2, Length 486 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TPM2YIL138C YDL129WQ07555 291 aa8.13□□□□□ -1.11
TPM2YIL138C PTC4P38089 393 aa8.12□□□□□ -1.11
TPM2YIL138C MIF2P35201 549 aa8.11□□□□□ -1.11
TPM2YIL138C RAM2P29703 316 aa8.1□□□□□ -1.11
TPM2YIL138C YDR344CQ05510 147 aa8.1□□□□□ -1.11
TPM2YIL138C EDS1P38073 919 aa8.08□□□□□ -1.12
TPM2YIL138C GRE2Q12068 342 aaKnown RBP8.07□□□□□ -1.12
TPM2YIL138C CHL1P22516 861 aaPredicted RBP8.04□□□□□ -1.12
TPM2YIL138C MAK11P20484 414 aaKnown RBP8.03□□□□□ -1.12
TPM2YIL138C PTC3P34221 468 aaKnown RBP8.03□□□□□ -1.12
TPM2YIL138C PRE3P38624 215 aa8.03□□□□□ -1.12
TPM2YIL138C PML39Q03760 334 aa8.03□□□□□ -1.12
TPM2YIL138C BCK2P33306 851 aa8.02□□□□□ -1.13
TPM2YIL138C ATH1P48016 1211 aa8.01□□□□□ -1.13
TPM2YIL138C COQ8P27697 501 aa7.97□□□□□ -1.13
TPM2YIL138C GUT1P32190 709 aa7.97□□□□□ -1.13
TPM2YIL138C MID1P41821 548 aa7.96□□□□□ -1.14
TPM2YIL138C NST1P53935 1240 aa7.95□□□□□ -1.14
TPM2YIL138C SOL3P38858 249 aa7.94□□□□□ -1.14
TPM2YIL138C ELP4Q02884 456 aaKnown RBP7.93□□□□□ -1.14
TPM2YIL138C VRP1P37370 817 aa7.91□□□□□ -1.14
TPM2YIL138C ILV3P39522 585 aaKnown RBP7.88□□□□□ -1.15
TPM2YIL138C MPH3P0CE00 602 aa7.83□□□□□ -1.16
TPM2YIL138C ARH1P48360 493 aa7.83□□□□□ -1.16
TPM2YIL138C XDJ1P39102 459 aa7.81□□□□□ -1.16
TPM2YIL138C PEX29Q03370 554 aa7.81□□□□□ -1.16
TPM2YIL138C AI4P03878 556 aa7.79□□□□□ -1.16
TPM2YIL138C YGR273CP53329 174 aa7.77□□□□□ -1.17
TPM2YIL138C SPT23P35210 1082 aa7.73□□□□□ -1.17
TPM2YIL138C HAP5Q02516 242 aa7.73□□□□□ -1.17
TPM2YIL138C MPC54Q08550 464 aa7.73□□□□□ -1.17
TPM2YIL138C DPS1P04802 557 aaKnown RBP7.7□□□□□ -1.18
TPM2YIL138C SLI15P38283 698 aa7.69□□□□□ -1.18
TPM2YIL138C RGA2Q06407 1009 aa7.67□□□□□ -1.18
TPM2YIL138C NMA111P53920 997 aa7.66□□□□□ -1.18
TPM2YIL138C NOP53Q12080 455 aaKnown RBP7.66□□□□□ -1.18
TPM2YIL138C BNI4P53858 892 aa7.65□□□□□ -1.18
TPM2YIL138C PTC2P39966 464 aaKnown RBP7.64□□□□□ -1.19
TPM2YIL138C KEX1P09620 729 aa7.61□□□□□ -1.19
TPM2YIL138C DPL1Q05567 589 aa7.61□□□□□ -1.19
TPM2YIL138C YML082WQ04533 649 aaKnown RBP7.6□□□□□ -1.19
TPM2YIL138C SET1P38827 1080 aaKnown RBP7.58□□□□□ -1.2
TPM2YIL138C CDC73Q06697 393 aa7.58□□□□□ -1.2
TPM2YIL138C YPR015CQ12531 247 aa7.58□□□□□ -1.2
TPM2YIL138C VHR2P40041 505 aa7.55□□□□□ -1.2
TPM2YIL138C SRC1Q03707 834 aa7.55□□□□□ -1.2
TPM2YIL138C UBP14P38237 781 aaKnown RBP7.54□□□□□ -1.2
TPM2YIL138C YLR326WQ06170 240 aaKnown RBP7.54□□□□□ -1.2
TPM2YIL138C RAM1P22007 431 aa7.52□□□□□ -1.21
TPM2YIL138C RAS1P01119 309 aa7.5□□□□□ -1.21
TPM2YIL138C PDR1P12383 1068 aa7.5□□□□□ -1.21
TPM2YIL138C ISU2Q12056 156 aa7.5□□□□□ -1.21
TPM2YIL138C PCS60P38137 543 aaKnown RBP RIP-Chip data7.49□□□□□ -1.21not detected
TPM2YIL138C RAD54P32863 898 aa7.43□□□□□ -1.22
TPM2YIL138C GYP1Q08484 637 aa7.42□□□□□ -1.22
TPM2YIL138C SDH2P21801 266 aa7.39□□□□□ -1.23
TPM2YIL138C YDR090CQ03193 310 aa7.39□□□□□ -1.23
TPM2YIL138C RGA1P39083 1007 aa7.38□□□□□ -1.23
TPM2YIL138C YRR1Q12172 810 aa7.33□□□□□ -1.24
TPM2YIL138C AMS1P22855 1083 aa7.32□□□□□ -1.24
TPM2YIL138C IFH1P39520 1085 aa7.3□□□□□ -1.24
TPM2YIL138C BUD20Q08004 166 aaPredicted RBP7.3□□□□□ -1.24
TPM2YIL138C KIC1P38692 1080 aa7.29□□□□□ -1.24
TPM2YIL138C STR2P47164 639 aa7.28□□□□□ -1.24
TPM2YIL138C RPP1BP10622 106 aaKnown RBP7.27□□□□□ -1.25
TPM2YIL138C ISM1P48526 1002 aa7.27□□□□□ -1.25
TPM2YIL138C PEX21P50091 288 aa7.27□□□□□ -1.25
TPM2YIL138C SAS4Q04003 481 aa7.26□□□□□ -1.25
TPM2YIL138C TUM1Q08686 304 aaKnown RBP7.26□□□□□ -1.25
TPM2YIL138C GAP1P19145 602 aaPredicted RBP7.25□□□□□ -1.25
TPM2YIL138C TRK1P12685 1235 aa7.24□□□□□ -1.25
TPM2YIL138C REF2P42073 533 aaPredicted RBP7.24□□□□□ -1.25
TPM2YIL138C PRT1P06103 763 aaKnown RBP7.22□□□□□ -1.25
TPM2YIL138C NUD1P32336 851 aa7.22□□□□□ -1.25
TPM2YIL138C VPS70P47161 811 aa7.22□□□□□ -1.25
TPM2YIL138C YPR148CQ06523 435 aa7.22□□□□□ -1.25
TPM2YIL138C ORC6P38826 435 aa7.2□□□□□ -1.26
TPM2YIL138C CSC1Q06538 782 aa7.2□□□□□ -1.26
TPM2YIL138C YEL077CQ3E7X8 1277 aa7.2□□□□□ -1.26
TPM2YIL138C TFB4Q12004 338 aa7.19□□□□□ -1.26
TPM2YIL138C TY1A-DR4O74302 440 aa7.16□□□□□ -1.26
TPM2YIL138C TY1A-HP0C2I4 478 aaKnown RBP7.16□□□□□ -1.26
TPM2YIL138C TY1A-AP0CX57 440 aa7.16□□□□□ -1.26
TPM2YIL138C TY1A-PR1P0CX58 440 aa7.16□□□□□ -1.26
TPM2YIL138C TY1A-ORP0CX59 440 aa7.16□□□□□ -1.26
TPM2YIL138C TY1A-PR2P0CX60 440 aa7.16□□□□□ -1.26
TPM2YIL138C TY1A-DR5P0CX65 440 aa7.16□□□□□ -1.26
TPM2YIL138C TY1A-ER2P0CX66 440 aa7.16□□□□□ -1.26
TPM2YIL138C TY1A-GR3P0CX67 440 aa7.16□□□□□ -1.26
TPM2YIL138C TY1A-LR1P0CX68 440 aa7.16□□□□□ -1.26
TPM2YIL138C TY1A-MR2P0CX69 440 aa7.16□□□□□ -1.26
TPM2YIL138C SEC2P17065 759 aa7.16□□□□□ -1.26
TPM2YIL138C CST6P40535 587 aa7.16□□□□□ -1.26
TPM2YIL138C TY1A-JR2P47099 440 aa7.16□□□□□ -1.26
TPM2YIL138C CLA4P48562 842 aa7.16□□□□□ -1.26
TPM2YIL138C TY1A-DR1Q03856 440 aa7.16□□□□□ -1.26
TPM2YIL138C TY1A-ML1Q04706 440 aaKnown RBP7.16□□□□□ -1.26
TPM2YIL138C TY1A-BRQ12217 440 aa7.16□□□□□ -1.26
TPM2YIL138C TY1A-NL2Q12470 440 aa7.16□□□□□ -1.26
TPM2YIL138C TY1A-GR2Q12485 440 aa7.16□□□□□ -1.26
Retrieved 100 of 5,963 RNA–protein pairs in 42.6 ms