RNA–Protein interactions for RNA: YIL003W

CFD1, Transcript of Highly conserved iron-sulfur cluster binding protein, yeastyeast

Gene CFD1, Length 882 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CFD1YIL003W PTC4P38089 393 aa7.35□□□□□ -1.23
CFD1YIL003W CHL1P22516 861 aaPredicted RBP7.32□□□□□ -1.24
CFD1YIL003W DCW1P36091 449 aa7.32□□□□□ -1.24
CFD1YIL003W YEL023CP39992 682 aa7.32□□□□□ -1.24
CFD1YIL003W BCK2P33306 851 aa7.29□□□□□ -1.24
CFD1YIL003W PRE3P38624 215 aa7.29□□□□□ -1.24
CFD1YIL003W GRE2Q12068 342 aaKnown RBP7.25□□□□□ -1.25
CFD1YIL003W MAK11P20484 414 aaKnown RBP7.21□□□□□ -1.26
CFD1YIL003W DMA1P38823 416 aa7.21□□□□□ -1.26
CFD1YIL003W GUT1P32190 709 aa7.18□□□□□ -1.26
CFD1YIL003W MIF2P35201 549 aa7.18□□□□□ -1.26
CFD1YIL003W RAM2P29703 316 aa7.17□□□□□ -1.26
CFD1YIL003W PML39Q03760 334 aa7.17□□□□□ -1.26
CFD1YIL003W PTC3P34221 468 aaKnown RBP7.16□□□□□ -1.26
CFD1YIL003W ATH1P48016 1211 aa7.16□□□□□ -1.26
CFD1YIL003W EDS1P38073 919 aa7.15□□□□□ -1.26
CFD1YIL003W VRP1P37370 817 aa7.12□□□□□ -1.27
CFD1YIL003W XDJ1P39102 459 aa7.12□□□□□ -1.27
CFD1YIL003W NST1P53935 1240 aa7.12□□□□□ -1.27
CFD1YIL003W YDR344CQ05510 147 aa7.12□□□□□ -1.27
CFD1YIL003W ELP4Q02884 456 aaKnown RBP7.11□□□□□ -1.27
CFD1YIL003W ARH1P48360 493 aa7.1□□□□□ -1.27
CFD1YIL003W COQ8P27697 501 aa7.09□□□□□ -1.27
CFD1YIL003W AI4P03878 556 aa7.06□□□□□ -1.28
CFD1YIL003W SOL3P38858 249 aa7.06□□□□□ -1.28
CFD1YIL003W MPH3P0CE00 602 aa7.05□□□□□ -1.28
CFD1YIL003W MID1P41821 548 aa7.05□□□□□ -1.28
CFD1YIL003W NOP53Q12080 455 aaKnown RBP7.04□□□□□ -1.28
CFD1YIL003W SPT23P35210 1082 aa7.01□□□□□ -1.29
CFD1YIL003W PEX29Q03370 554 aa7□□□□□ -1.29
CFD1YIL003W DPS1P04802 557 aaKnown RBP6.97□□□□□ -1.29
CFD1YIL003W ILV3P39522 585 aaKnown RBP6.97□□□□□ -1.29
CFD1YIL003W HAP5Q02516 242 aa6.97□□□□□ -1.29
CFD1YIL003W YGR273CP53329 174 aa6.96□□□□□ -1.3
CFD1YIL003W BNI4P53858 892 aa6.95□□□□□ -1.3
CFD1YIL003W YML082WQ04533 649 aaKnown RBP6.92□□□□□ -1.3
CFD1YIL003W MPC54Q08550 464 aa6.92□□□□□ -1.3
CFD1YIL003W TAF7Q05021 590 aa6.91□□□□□ -1.3
CFD1YIL003W PTC2P39966 464 aaKnown RBP6.89□□□□□ -1.31
CFD1YIL003W NMA111P53920 997 aa6.87□□□□□ -1.31
CFD1YIL003W SLI15P38283 698 aa6.86□□□□□ -1.31
CFD1YIL003W DPL1Q05567 589 aa6.85□□□□□ -1.31
CFD1YIL003W SRC1Q03707 834 aa6.81□□□□□ -1.32
CFD1YIL003W KEX1P09620 729 aa6.8□□□□□ -1.32
CFD1YIL003W ISU2Q12056 156 aa6.77□□□□□ -1.33
CFD1YIL003W LEO1P38439 464 aa6.76□□□□□ -1.33
CFD1YIL003W YPR015CQ12531 247 aa6.75□□□□□ -1.33
CFD1YIL003W RAM1P22007 431 aa6.74□□□□□ -1.33
CFD1YIL003W SET1P38827 1080 aaKnown RBP6.73□□□□□ -1.33
CFD1YIL003W CDC73Q06697 393 aa6.72□□□□□ -1.33
CFD1YIL003W UBP14P38237 781 aaKnown RBP6.71□□□□□ -1.34
CFD1YIL003W YLR326WQ06170 240 aaKnown RBP6.71□□□□□ -1.34
CFD1YIL003W RAS1P01119 309 aa6.7□□□□□ -1.34
CFD1YIL003W GYP1Q08484 637 aa6.68□□□□□ -1.34
CFD1YIL003W AMS1P22855 1083 aa6.66□□□□□ -1.34
CFD1YIL003W PCS60P38137 543 aaKnown RBP RIP-Chip data6.66□□□□□ -1.34not detected
CFD1YIL003W VHR2P40041 505 aa6.66□□□□□ -1.34
CFD1YIL003W SAS4Q04003 481 aa6.66□□□□□ -1.34
CFD1YIL003W RPP1BP10622 106 aaKnown RBP6.65□□□□□ -1.34
CFD1YIL003W RAD54P32863 898 aa6.65□□□□□ -1.34
CFD1YIL003W SAS10Q12136 610 aaPredicted RBP6.65□□□□□ -1.34
CFD1YIL003W PDR1P12383 1068 aa6.64□□□□□ -1.35
CFD1YIL003W LEU3P08638 886 aa6.6□□□□□ -1.35
CFD1YIL003W TRK1P12685 1235 aa6.6□□□□□ -1.35
CFD1YIL003W RGA1P39083 1007 aa6.6□□□□□ -1.35
CFD1YIL003W IFH1P39520 1085 aa6.6□□□□□ -1.35
CFD1YIL003W RGA2Q06407 1009 aa6.6□□□□□ -1.35
CFD1YIL003W SDH2P21801 266 aa6.59□□□□□ -1.35
CFD1YIL003W YDR090CQ03193 310 aa6.58□□□□□ -1.36
CFD1YIL003W YEL077CQ3E7X8 1277 aa6.56□□□□□ -1.36
CFD1YIL003W MRF1P30775 413 aaPredicted RBP6.55□□□□□ -1.36
CFD1YIL003W GAP1P19145 602 aaPredicted RBP6.54□□□□□ -1.36
CFD1YIL003W KIC1P38692 1080 aa6.54□□□□□ -1.36
CFD1YIL003W BUD20Q08004 166 aaPredicted RBP6.54□□□□□ -1.36
CFD1YIL003W PRT1P06103 763 aaKnown RBP6.53□□□□□ -1.36
CFD1YIL003W PEX21P50091 288 aa6.53□□□□□ -1.36
CFD1YIL003W CSC1Q06538 782 aa6.52□□□□□ -1.37
CFD1YIL003W TFB4Q12004 338 aa6.52□□□□□ -1.37
CFD1YIL003W YRR1Q12172 810 aa6.52□□□□□ -1.37
CFD1YIL003W YPR148CQ06523 435 aa6.5□□□□□ -1.37
CFD1YIL003W REF2P42073 533 aaPredicted RBP6.49□□□□□ -1.37
CFD1YIL003W STR2P47164 639 aa6.49□□□□□ -1.37
CFD1YIL003W TUM1Q08686 304 aaKnown RBP6.47□□□□□ -1.37
CFD1YIL003W ISM1P48526 1002 aa6.46□□□□□ -1.38
CFD1YIL003W ERG12P07277 443 aa6.45□□□□□ -1.38
CFD1YIL003W NUD1P32336 851 aa6.45□□□□□ -1.38
CFD1YIL003W ORC6P38826 435 aa6.45□□□□□ -1.38
CFD1YIL003W NPL4P33755 580 aa6.43□□□□□ -1.38
CFD1YIL003W MAK21Q12176 1025 aaKnown RBP6.42□□□□□ -1.38
CFD1YIL003W COX6P00427 148 aa6.4□□□□□ -1.38
CFD1YIL003W CST6P40535 587 aa6.39□□□□□ -1.39
CFD1YIL003W TY1A-DR4O74302 440 aa6.38□□□□□ -1.39
CFD1YIL003W TY1A-HP0C2I4 478 aaKnown RBP6.38□□□□□ -1.39
CFD1YIL003W TY1A-AP0CX57 440 aa6.38□□□□□ -1.39
CFD1YIL003W TY1A-PR1P0CX58 440 aa6.38□□□□□ -1.39
CFD1YIL003W TY1A-ORP0CX59 440 aa6.38□□□□□ -1.39
CFD1YIL003W TY1A-PR2P0CX60 440 aa6.38□□□□□ -1.39
CFD1YIL003W TY1A-DR5P0CX65 440 aa6.38□□□□□ -1.39
CFD1YIL003W TY1A-ER2P0CX66 440 aa6.38□□□□□ -1.39
CFD1YIL003W TY1A-GR3P0CX67 440 aa6.38□□□□□ -1.39
Retrieved 100 of 5,963 RNA–protein pairs in 22.6 ms