RNA–Protein interactions for RNA: YHR052W

CIC1, Transcript of Essential protein that interacts with proteasome components, yeastyeast

Gene CIC1, Length 1,131 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CIC1YHR052W YEL023CP39992 682 aa9.02□□□□□ -0.97
CIC1YHR052W PTC4P38089 393 aa9□□□□□ -0.97
CIC1YHR052W CHL1P22516 861 aaPredicted RBP8.95□□□□□ -0.98
CIC1YHR052W BCK2P33306 851 aa8.93□□□□□ -0.98
CIC1YHR052W MIF2P35201 549 aa8.92□□□□□ -0.98
CIC1YHR052W PRE3P38624 215 aa8.92□□□□□ -0.98
CIC1YHR052W GRE2Q12068 342 aaKnown RBP8.92□□□□□ -0.98
CIC1YHR052W YDR344CQ05510 147 aa8.89□□□□□ -0.99
CIC1YHR052W RAM2P29703 316 aa8.88□□□□□ -0.99
CIC1YHR052W EDS1P38073 919 aa8.87□□□□□ -0.99
CIC1YHR052W PML39Q03760 334 aa8.87□□□□□ -0.99
CIC1YHR052W MAK11P20484 414 aaKnown RBP8.86□□□□□ -0.99
CIC1YHR052W PTC3P34221 468 aaKnown RBP8.84□□□□□ -0.99
CIC1YHR052W ATH1P48016 1211 aa8.84□□□□□ -0.99
CIC1YHR052W GUT1P32190 709 aa8.81□□□□□ -1
CIC1YHR052W ELP4Q02884 456 aaKnown RBP8.79□□□□□ -1
CIC1YHR052W VRP1P37370 817 aa8.77□□□□□ -1.01
CIC1YHR052W COQ8P27697 501 aa8.76□□□□□ -1.01
CIC1YHR052W MID1P41821 548 aa8.76□□□□□ -1.01
CIC1YHR052W NST1P53935 1240 aa8.75□□□□□ -1.01
CIC1YHR052W SOL3P38858 249 aa8.74□□□□□ -1.01
CIC1YHR052W XDJ1P39102 459 aa8.7□□□□□ -1.02
CIC1YHR052W ARH1P48360 493 aa8.68□□□□□ -1.02
CIC1YHR052W MPH3P0CE00 602 aa8.65□□□□□ -1.02
CIC1YHR052W ILV3P39522 585 aaKnown RBP8.65□□□□□ -1.02
CIC1YHR052W PEX29Q03370 554 aa8.65□□□□□ -1.02
CIC1YHR052W AI4P03878 556 aa8.63□□□□□ -1.03
CIC1YHR052W SPT23P35210 1082 aa8.59□□□□□ -1.03
CIC1YHR052W DPS1P04802 557 aaKnown RBP8.56□□□□□ -1.04
CIC1YHR052W YGR273CP53329 174 aa8.56□□□□□ -1.04
CIC1YHR052W HAP5Q02516 242 aa8.56□□□□□ -1.04
CIC1YHR052W MPC54Q08550 464 aa8.53□□□□□ -1.04
CIC1YHR052W NOP53Q12080 455 aaKnown RBP8.51□□□□□ -1.05
CIC1YHR052W BNI4P53858 892 aa8.49□□□□□ -1.05
CIC1YHR052W SLI15P38283 698 aa8.48□□□□□ -1.05
CIC1YHR052W PTC2P39966 464 aaKnown RBP8.48□□□□□ -1.05
CIC1YHR052W NMA111P53920 997 aa8.47□□□□□ -1.05
CIC1YHR052W YML082WQ04533 649 aaKnown RBP8.44□□□□□ -1.06
CIC1YHR052W DPL1Q05567 589 aa8.41□□□□□ -1.06
CIC1YHR052W KEX1P09620 729 aa8.38□□□□□ -1.07
CIC1YHR052W SRC1Q03707 834 aa8.36□□□□□ -1.07
CIC1YHR052W YPR015CQ12531 247 aa8.35□□□□□ -1.07
CIC1YHR052W CDC73Q06697 393 aa8.33□□□□□ -1.08
CIC1YHR052W SET1P38827 1080 aaKnown RBP8.32□□□□□ -1.08
CIC1YHR052W ISU2Q12056 156 aa8.31□□□□□ -1.08
CIC1YHR052W RAM1P22007 431 aa8.3□□□□□ -1.08
CIC1YHR052W RAS1P01119 309 aa8.29□□□□□ -1.08
CIC1YHR052W YLR326WQ06170 240 aaKnown RBP8.29□□□□□ -1.08
CIC1YHR052W UBP14P38237 781 aaKnown RBP8.28□□□□□ -1.08
CIC1YHR052W VHR2P40041 505 aa8.28□□□□□ -1.08
CIC1YHR052W PDR1P12383 1068 aa8.25□□□□□ -1.09
CIC1YHR052W PCS60P38137 543 aaKnown RBP RIP-Chip data8.23□□□□□ -1.09not detected
CIC1YHR052W GYP1Q08484 637 aa8.22□□□□□ -1.09
CIC1YHR052W RAD54P32863 898 aa8.19□□□□□ -1.1
CIC1YHR052W SDH2P21801 266 aa8.14□□□□□ -1.11
CIC1YHR052W AMS1P22855 1083 aa8.13□□□□□ -1.11
CIC1YHR052W YDR090CQ03193 310 aa8.1□□□□□ -1.11
CIC1YHR052W RPP1BP10622 106 aaKnown RBP8.09□□□□□ -1.11
CIC1YHR052W SAS4Q04003 481 aa8.09□□□□□ -1.11
CIC1YHR052W RGA2Q06407 1009 aa8.09□□□□□ -1.11
CIC1YHR052W YRR1Q12172 810 aa8.07□□□□□ -1.12
CIC1YHR052W TRK1P12685 1235 aa8.05□□□□□ -1.12
CIC1YHR052W KIC1P38692 1080 aa8.05□□□□□ -1.12
CIC1YHR052W BUD20Q08004 166 aaPredicted RBP8.05□□□□□ -1.12
CIC1YHR052W PEX21P50091 288 aa8.03□□□□□ -1.12
CIC1YHR052W RGA1P39083 1007 aa8.01□□□□□ -1.13
CIC1YHR052W STR2P47164 639 aa8.01□□□□□ -1.13
CIC1YHR052W YEL077CQ3E7X8 1277 aa8.01□□□□□ -1.13
CIC1YHR052W IFH1P39520 1085 aa8□□□□□ -1.13
CIC1YHR052W ISM1P48526 1002 aa8□□□□□ -1.13
CIC1YHR052W PRT1P06103 763 aaKnown RBP7.99□□□□□ -1.13
CIC1YHR052W GAP1P19145 602 aaPredicted RBP7.99□□□□□ -1.13
CIC1YHR052W TUM1Q08686 304 aaKnown RBP7.99□□□□□ -1.13
CIC1YHR052W MRF1P30775 413 aaPredicted RBP7.97□□□□□ -1.13
CIC1YHR052W REF2P42073 533 aaPredicted RBP7.97□□□□□ -1.13
CIC1YHR052W NUD1P32336 851 aa7.96□□□□□ -1.14
CIC1YHR052W CSC1Q06538 782 aa7.96□□□□□ -1.14
CIC1YHR052W TFB4Q12004 338 aa7.96□□□□□ -1.14
CIC1YHR052W YPR148CQ06523 435 aa7.93□□□□□ -1.14
CIC1YHR052W ORC6P38826 435 aa7.91□□□□□ -1.14
CIC1YHR052W ERG12P07277 443 aa7.9□□□□□ -1.14
CIC1YHR052W NPL4P33755 580 aa7.89□□□□□ -1.15
CIC1YHR052W VPS70P47161 811 aa7.89□□□□□ -1.15
CIC1YHR052W TY1A-DR4O74302 440 aa7.88□□□□□ -1.15
CIC1YHR052W TY1A-HP0C2I4 478 aaKnown RBP7.88□□□□□ -1.15
CIC1YHR052W TY1A-AP0CX57 440 aa7.88□□□□□ -1.15
CIC1YHR052W TY1A-PR1P0CX58 440 aa7.88□□□□□ -1.15
CIC1YHR052W TY1A-ORP0CX59 440 aa7.88□□□□□ -1.15
CIC1YHR052W TY1A-PR2P0CX60 440 aa7.88□□□□□ -1.15
CIC1YHR052W TY1A-DR5P0CX65 440 aa7.88□□□□□ -1.15
CIC1YHR052W TY1A-ER2P0CX66 440 aa7.88□□□□□ -1.15
CIC1YHR052W TY1A-GR3P0CX67 440 aa7.88□□□□□ -1.15
CIC1YHR052W TY1A-LR1P0CX68 440 aa7.88□□□□□ -1.15
CIC1YHR052W TY1A-MR2P0CX69 440 aa7.88□□□□□ -1.15
CIC1YHR052W GCD11P32481 527 aaKnown RBP7.88□□□□□ -1.15
CIC1YHR052W AIR1P40507 360 aaKnown RBP7.88□□□□□ -1.15
CIC1YHR052W CST6P40535 587 aa7.88□□□□□ -1.15
CIC1YHR052W TY1A-JR2P47099 440 aa7.88□□□□□ -1.15
CIC1YHR052W CLA4P48562 842 aa7.88□□□□□ -1.15
CIC1YHR052W TY1A-DR1Q03856 440 aa7.88□□□□□ -1.15
Retrieved 100 of 5,963 RNA–protein pairs in 8.3 ms