RNA–Protein interactions for RNA: YGR193C

PDX1, Transcript of E3-binding protein of the mitochondrial pyruvate dehydrogenase complex, yeastyeast

Gene PDX1, Length 1,233 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PDX1YGR193C YDL129WQ07555 291 aa7.2□□□□□ -1.26
PDX1YGR193C PTC4P38089 393 aa7.17□□□□□ -1.26
PDX1YGR193C RAM2P29703 316 aa7.16□□□□□ -1.26
PDX1YGR193C EDS1P38073 919 aa7.14□□□□□ -1.27
PDX1YGR193C YDR344CQ05510 147 aa7.14□□□□□ -1.27
PDX1YGR193C GRE2Q12068 342 aaKnown RBP7.13□□□□□ -1.27
PDX1YGR193C MAK11P20484 414 aaKnown RBP7.12□□□□□ -1.27
PDX1YGR193C CHL1P22516 861 aaPredicted RBP7.11□□□□□ -1.27
PDX1YGR193C MIF2P35201 549 aa7.11□□□□□ -1.27
PDX1YGR193C PRE3P38624 215 aa7.11□□□□□ -1.27
PDX1YGR193C BCK2P33306 851 aa7.09□□□□□ -1.27
PDX1YGR193C PTC3P34221 468 aaKnown RBP7.09□□□□□ -1.27
PDX1YGR193C ATH1P48016 1211 aa7.06□□□□□ -1.28
PDX1YGR193C NST1P53935 1240 aa7.06□□□□□ -1.28
PDX1YGR193C PML39Q03760 334 aa7.06□□□□□ -1.28
PDX1YGR193C GUT1P32190 709 aa7.05□□□□□ -1.28
PDX1YGR193C COQ8P27697 501 aa7.04□□□□□ -1.28
PDX1YGR193C SOL3P38858 249 aa7.03□□□□□ -1.28
PDX1YGR193C MID1P41821 548 aa7□□□□□ -1.29
PDX1YGR193C ILV3P39522 585 aaKnown RBP6.98□□□□□ -1.29
PDX1YGR193C ELP4Q02884 456 aaKnown RBP6.98□□□□□ -1.29
PDX1YGR193C VRP1P37370 817 aa6.96□□□□□ -1.3
PDX1YGR193C MPH3P0CE00 602 aa6.94□□□□□ -1.3
PDX1YGR193C ARH1P48360 493 aa6.94□□□□□ -1.3
PDX1YGR193C AI4P03878 556 aa6.92□□□□□ -1.3
PDX1YGR193C XDJ1P39102 459 aa6.92□□□□□ -1.3
PDX1YGR193C PEX29Q03370 554 aa6.88□□□□□ -1.31
PDX1YGR193C YGR273CP53329 174 aa6.87□□□□□ -1.31
PDX1YGR193C SPT23P35210 1082 aa6.85□□□□□ -1.31
PDX1YGR193C HAP5Q02516 242 aa6.84□□□□□ -1.31
PDX1YGR193C MPC54Q08550 464 aa6.83□□□□□ -1.32
PDX1YGR193C NOP53Q12080 455 aaKnown RBP6.83□□□□□ -1.32
PDX1YGR193C DPS1P04802 557 aaKnown RBP6.8□□□□□ -1.32
PDX1YGR193C SLI15P38283 698 aa6.8□□□□□ -1.32
PDX1YGR193C BNI4P53858 892 aa6.79□□□□□ -1.32
PDX1YGR193C PTC2P39966 464 aaKnown RBP6.76□□□□□ -1.33
PDX1YGR193C NMA111P53920 997 aa6.75□□□□□ -1.33
PDX1YGR193C YML082WQ04533 649 aaKnown RBP6.75□□□□□ -1.33
PDX1YGR193C KEX1P09620 729 aa6.73□□□□□ -1.33
PDX1YGR193C DPL1Q05567 589 aa6.73□□□□□ -1.33
PDX1YGR193C YPR015CQ12531 247 aa6.71□□□□□ -1.34
PDX1YGR193C SRC1Q03707 834 aa6.7□□□□□ -1.34
PDX1YGR193C RAM1P22007 431 aa6.68□□□□□ -1.34
PDX1YGR193C SET1P38827 1080 aaKnown RBP6.68□□□□□ -1.34
PDX1YGR193C YLR326WQ06170 240 aaKnown RBP6.68□□□□□ -1.34
PDX1YGR193C CDC73Q06697 393 aa6.67□□□□□ -1.34
PDX1YGR193C UBP14P38237 781 aaKnown RBP6.66□□□□□ -1.34
PDX1YGR193C VHR2P40041 505 aa6.65□□□□□ -1.34
PDX1YGR193C ISU2Q12056 156 aa6.64□□□□□ -1.35
PDX1YGR193C PCS60P38137 543 aaKnown RBP RIP-Chip data6.62□□□□□ -1.35not detected
PDX1YGR193C RAS1P01119 309 aa6.61□□□□□ -1.35
PDX1YGR193C PDR1P12383 1068 aa6.61□□□□□ -1.35
PDX1YGR193C RAD54P32863 898 aa6.57□□□□□ -1.36
PDX1YGR193C SDH2P21801 266 aa6.56□□□□□ -1.36
PDX1YGR193C YDR090CQ03193 310 aa6.54□□□□□ -1.36
PDX1YGR193C GYP1Q08484 637 aa6.53□□□□□ -1.36
PDX1YGR193C AMS1P22855 1083 aa6.49□□□□□ -1.37
PDX1YGR193C GAP1P19145 602 aaPredicted RBP6.46□□□□□ -1.38
PDX1YGR193C YRR1Q12172 810 aa6.46□□□□□ -1.38
PDX1YGR193C SAS4Q04003 481 aa6.45□□□□□ -1.38
PDX1YGR193C YPR148CQ06523 435 aa6.45□□□□□ -1.38
PDX1YGR193C BUD20Q08004 166 aaPredicted RBP6.45□□□□□ -1.38
PDX1YGR193C RPP1BP10622 106 aaKnown RBP6.44□□□□□ -1.38
PDX1YGR193C KIC1P38692 1080 aa6.44□□□□□ -1.38
PDX1YGR193C STR2P47164 639 aa6.44□□□□□ -1.38
PDX1YGR193C IFH1P39520 1085 aa6.43□□□□□ -1.38
PDX1YGR193C ISM1P48526 1002 aa6.42□□□□□ -1.38
PDX1YGR193C TRK1P12685 1235 aa6.41□□□□□ -1.38
PDX1YGR193C REF2P42073 533 aaPredicted RBP6.41□□□□□ -1.38
PDX1YGR193C PEX21P50091 288 aa6.4□□□□□ -1.38
PDX1YGR193C ORC6P38826 435 aa6.39□□□□□ -1.39
PDX1YGR193C CSC1Q06538 782 aa6.39□□□□□ -1.39
PDX1YGR193C TFB4Q12004 338 aa6.39□□□□□ -1.39
PDX1YGR193C YEL077CQ3E7X8 1277 aa6.39□□□□□ -1.39
PDX1YGR193C PRT1P06103 763 aaKnown RBP6.38□□□□□ -1.39
PDX1YGR193C NUD1P32336 851 aa6.38□□□□□ -1.39
PDX1YGR193C TUM1Q08686 304 aaKnown RBP6.38□□□□□ -1.39
PDX1YGR193C RGA1P39083 1007 aa6.37□□□□□ -1.39
PDX1YGR193C RGA2Q06407 1009 aa6.37□□□□□ -1.39
PDX1YGR193C TY1A-DR4O74302 440 aa6.35□□□□□ -1.39
PDX1YGR193C TY1A-HP0C2I4 478 aaKnown RBP6.35□□□□□ -1.39
PDX1YGR193C TY1A-AP0CX57 440 aa6.35□□□□□ -1.39
PDX1YGR193C TY1A-PR1P0CX58 440 aa6.35□□□□□ -1.39
PDX1YGR193C TY1A-ORP0CX59 440 aa6.35□□□□□ -1.39
PDX1YGR193C TY1A-PR2P0CX60 440 aa6.35□□□□□ -1.39
PDX1YGR193C TY1A-DR5P0CX65 440 aa6.35□□□□□ -1.39
PDX1YGR193C TY1A-ER2P0CX66 440 aa6.35□□□□□ -1.39
PDX1YGR193C TY1A-GR3P0CX67 440 aa6.35□□□□□ -1.39
PDX1YGR193C TY1A-LR1P0CX68 440 aa6.35□□□□□ -1.39
PDX1YGR193C TY1A-MR2P0CX69 440 aa6.35□□□□□ -1.39
PDX1YGR193C TY1A-JR2P47099 440 aa6.35□□□□□ -1.39
PDX1YGR193C VPS70P47161 811 aa6.35□□□□□ -1.39
PDX1YGR193C TY1A-DR1Q03856 440 aa6.35□□□□□ -1.39
PDX1YGR193C TY1A-ML1Q04706 440 aaKnown RBP6.35□□□□□ -1.39
PDX1YGR193C TY1A-BRQ12217 440 aa6.35□□□□□ -1.39
PDX1YGR193C TY1A-NL2Q12470 440 aa6.35□□□□□ -1.39
PDX1YGR193C TY1A-GR2Q12485 440 aa6.35□□□□□ -1.39
PDX1YGR193C MRF1P30775 413 aaPredicted RBP6.34□□□□□ -1.39
PDX1YGR193C SEC2P17065 759 aa6.33□□□□□ -1.4
PDX1YGR193C CST6P40535 587 aa6.33□□□□□ -1.4
Retrieved 100 of 5,963 RNA–protein pairs in 10.3 ms