RNA–Protein interactions for RNA: YGR116W

SPT6, Transcript of Nucleosome remodeling protein, yeastyeast

Gene SPT6, Length 4,356 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPT6YGR116W PDS5Q04264 1277 aa4.62□□□□□ -1.67
SPT6YGR116W MDS3P53094 1487 aa4.62□□□□□ -1.67
SPT6YGR116W IRC20Q06554 1556 aa4.62□□□□□ -1.67
SPT6YGR116W ORC1P54784 914 aaPredicted RBP4.61□□□□□ -1.67
SPT6YGR116W GCN2P15442 1659 aa4.61□□□□□ -1.67
SPT6YGR116W VPS27P40343 622 aaKnown RBP4.61□□□□□ -1.67
SPT6YGR116W SNF7P39929 240 aaKnown RBP4.61□□□□□ -1.67
SPT6YGR116W BUD21Q08492 214 aaPredicted RBP4.61□□□□□ -1.67
SPT6YGR116W TY3B-GQ99315 1547 aa4.61□□□□□ -1.67
SPT6YGR116W VTH1P40438 1549 aa4.6□□□□□ -1.67
SPT6YGR116W VTH2P40890 1549 aa4.6□□□□□ -1.67
SPT6YGR116W LEO1P38439 464 aa4.6□□□□□ -1.67
SPT6YGR116W OPY1P38271 328 aa4.59□□□□□ -1.67
SPT6YGR116W YRB30P53107 440 aaPredicted RBP4.59□□□□□ -1.67
SPT6YGR116W PDR5P33302 1511 aaKnown RBP4.59□□□□□ -1.67
SPT6YGR116W SNT2P53127 1403 aa4.59□□□□□ -1.67
SPT6YGR116W GEA2P39993 1459 aaKnown RBP4.58□□□□□ -1.68
SPT6YGR116W CKB1P43639 278 aa4.58□□□□□ -1.68
SPT6YGR116W TY1B-DR3Q99231 1755 aa4.58□□□□□ -1.68
SPT6YGR116W MMS1Q06211 1407 aa4.58□□□□□ -1.68
SPT6YGR116W AIM44Q99299 758 aa4.58□□□□□ -1.68
SPT6YGR116W SIS2P36024 562 aa4.57□□□□□ -1.68
SPT6YGR116W YIR014WP40570 242 aa4.57□□□□□ -1.68
SPT6YGR116W ABP1P15891 592 aaKnown RBP4.57□□□□□ -1.68
SPT6YGR116W TY2B-LR1P0C2J3 1770 aa4.56□□□□□ -1.68
SPT6YGR116W TY2B-FP0CX63 1770 aa4.56□□□□□ -1.68
SPT6YGR116W TY2B-GR2P0CX64 1770 aa4.56□□□□□ -1.68
SPT6YGR116W TY2B-CP25384 1770 aa4.56□□□□□ -1.68
SPT6YGR116W TY2B-DR2Q03494 1770 aa4.56□□□□□ -1.68
SPT6YGR116W TY1B-DR1Q03855 1755 aa4.56□□□□□ -1.68
SPT6YGR116W TY2B-DR3Q07791 1770 aaKnown RBP4.56□□□□□ -1.68
SPT6YGR116W TY2B-OR1Q12113 1770 aa4.56□□□□□ -1.68
SPT6YGR116W TY2B-DR1Q12472 1770 aa4.56□□□□□ -1.68
SPT6YGR116W TY2B-OR2Q12501 1770 aa4.56□□□□□ -1.68
SPT6YGR116W FUN12P39730 1002 aaKnown RBP4.56□□□□□ -1.68
SPT6YGR116W YBT1P32386 1661 aa4.56□□□□□ -1.68
SPT6YGR116W ROX1P25042 368 aa4.55□□□□□ -1.68
SPT6YGR116W RVB2Q12464 471 aaKnown RBP4.54□□□□□ -1.68
SPT6YGR116W TY3B-IQ7LHG5 1498 aaKnown RBP4.54□□□□□ -1.68
SPT6YGR116W TY2B-BQ12491 1770 aa4.54□□□□□ -1.68
SPT6YGR116W VPS24P36095 224 aaKnown RBP4.54□□□□□ -1.68
SPT6YGR116W ARO1P08566 1588 aaKnown RBP4.53□□□□□ -1.68
SPT6YGR116W GDB1Q06625 1536 aa4.52□□□□□ -1.69
SPT6YGR116W IOC4Q04213 475 aa4.52□□□□□ -1.69
SPT6YGR116W ESL2P36168 1195 aa4.52□□□□□ -1.69
SPT6YGR116W YDL144CQ07589 356 aa4.52□□□□□ -1.69
SPT6YGR116W IQG1Q12280 1495 aa4.51□□□□□ -1.69
SPT6YGR116W RAD2P07276 1031 aa4.51□□□□□ -1.69
SPT6YGR116W TAF5P38129 798 aa4.51□□□□□ -1.69
SPT6YGR116W NOP58Q12499 511 aaKnown RBP4.51□□□□□ -1.69
SPT6YGR116W KIP3P53086 805 aaKnown RBP4.51□□□□□ -1.69
SPT6YGR116W BUD27P43573 796 aaKnown RBP RIP-Chip data4.5□□□□□ -1.69not detected
SPT6YGR116W PCT1P13259 424 aa4.5□□□□□ -1.69
SPT6YGR116W SLN1P39928 1220 aaPredicted RBP4.49□□□□□ -1.69
SPT6YGR116W TY1B-HO13535 1793 aa4.49□□□□□ -1.69
SPT6YGR116W TY1B-DR5P0C2I2 1755 aa4.49□□□□□ -1.69
SPT6YGR116W TY1B-DR6P0C2I3 1755 aa4.49□□□□□ -1.69
SPT6YGR116W TY1B-LR2P0C2I5 1755 aa4.49□□□□□ -1.69
SPT6YGR116W TY1B-LR3P0C2I6 1755 aaKnown RBP4.49□□□□□ -1.69
SPT6YGR116W TY1B-PR1P0C2I9 1755 aaKnown RBP4.49□□□□□ -1.69
SPT6YGR116W TY1B-PR2P0C2J0 1756 aa4.49□□□□□ -1.69
SPT6YGR116W TY1B-PR3P0C2J1 1755 aaKnown RBP4.49□□□□□ -1.69
SPT6YGR116W TY1B-JR1P47098 1755 aa4.49□□□□□ -1.69
SPT6YGR116W TY1B-ML2Q03434 1755 aaKnown RBP4.49□□□□□ -1.69
SPT6YGR116W TY1B-ER1Q03612 1755 aa4.49□□□□□ -1.69
SPT6YGR116W TY1B-ML1Q04711 1755 aaKnown RBP4.49□□□□□ -1.69
SPT6YGR116W TY1B-GR2Q12269 1755 aa4.49□□□□□ -1.69
SPT6YGR116W TY1B-OLQ12273 1755 aa4.49□□□□□ -1.69
SPT6YGR116W TY1B-PLQ12414 1755 aaKnown RBP4.49□□□□□ -1.69
SPT6YGR116W RTC1Q08281 1341 aa4.49□□□□□ -1.69
SPT6YGR116W COG8Q04632 607 aa4.49□□□□□ -1.69
SPT6YGR116W EDE1P34216 1381 aa4.49□□□□□ -1.69
SPT6YGR116W RAV1P47104 1357 aa4.48□□□□□ -1.69
SPT6YGR116W DJP1P40564 432 aa4.48□□□□□ -1.69
SPT6YGR116W LSP1Q12230 341 aaKnown RBP4.48□□□□□ -1.69
SPT6YGR116W ARL1P38116 183 aaKnown RBP4.48□□□□□ -1.69
SPT6YGR116W CDC25P04821 1589 aa4.48□□□□□ -1.69
SPT6YGR116W NOT3P06102 836 aaKnown RBP4.48□□□□□ -1.69
SPT6YGR116W MSP1P28737 362 aa4.48□□□□□ -1.69
SPT6YGR116W NAB6Q03735 1134 aaKnown RBP RIP-Chip data4.48□□□□□ -1.69not detected
SPT6YGR116W NST1P53935 1240 aa4.47□□□□□ -1.69
SPT6YGR116W LTE1P07866 1435 aa4.47□□□□□ -1.69
SPT6YGR116W NUP157P40064 1391 aaKnown RBP4.47□□□□□ -1.69
SPT6YGR116W MET10P39692 1035 aa4.47□□□□□ -1.69
SPT6YGR116W SUI2P20459 304 aaKnown RBP4.46□□□□□ -1.69
SPT6YGR116W RIX1P38883 763 aaPredicted RBP4.46□□□□□ -1.7
SPT6YGR116W ESC2Q06340 456 aa4.46□□□□□ -1.7
SPT6YGR116W TY1B-BRQ12193 1756 aa4.45□□□□□ -1.7
SPT6YGR116W TY1B-GR3Q12316 1755 aa4.45□□□□□ -1.7
SPT6YGR116W TY1B-ORQ92393 1755 aa4.45□□□□□ -1.7
SPT6YGR116W PDR12Q02785 1511 aa4.45□□□□□ -1.7
SPT6YGR116W RLF2Q12495 606 aa4.45□□□□□ -1.7
SPT6YGR116W YOR093CQ12275 1648 aa4.45□□□□□ -1.7
SPT6YGR116W SPE2P21182 396 aa4.45□□□□□ -1.7
SPT6YGR116W ECM16Q04217 1267 aaKnown RBP4.45□□□□□ -1.7
SPT6YGR116W NAP1P25293 417 aaKnown RBP4.44□□□□□ -1.7
SPT6YGR116W NTE1Q04958 1679 aa4.44□□□□□ -1.7
SPT6YGR116W TY1B-JR2P47100 1755 aaKnown RBP4.44□□□□□ -1.7
SPT6YGR116W TY1B-ER2Q03619 1755 aa4.44□□□□□ -1.7
SPT6YGR116W TY1B-MR1Q04214 1755 aa4.44□□□□□ -1.7
Retrieved 100 of 5,963 RNA–protein pairs in 24.1 ms