RNA–Protein interactions for RNA: YGL155W

CDC43, Transcript of Beta subunit of geranylgeranyltransferase type I, yeastyeast

Gene CDC43, Length 1,131 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC43YGL155W ARP8Q12386 881 aaKnown RBP RIP-Chip data7.79□□□□□ -1.16not detected
CDC43YGL155W MYO4P32492 1471 aa7.79□□□□□ -1.16
CDC43YGL155W SCC2Q04002 1493 aa7.78□□□□□ -1.16
CDC43YGL155W PEP1P32319 1579 aa7.78□□□□□ -1.16
CDC43YGL155W BPT1P14772 1559 aa7.77□□□□□ -1.17
CDC43YGL155W MDS3P53094 1487 aa7.77□□□□□ -1.17
CDC43YGL155W RPO31P04051 1460 aa7.76□□□□□ -1.17
CDC43YGL155W TOP2P06786 1428 aaKnown RBP7.75□□□□□ -1.17
CDC43YGL155W SMC4Q12267 1418 aa7.75□□□□□ -1.17
CDC43YGL155W ULI1P43604 169 aa7.74□□□□□ -1.17
CDC43YGL155W CST9Q06032 482 aa7.73□□□□□ -1.17
CDC43YGL155W UFD4P33202 1483 aa7.7□□□□□ -1.18
CDC43YGL155W IKI3Q06706 1349 aaKnown RBP7.7□□□□□ -1.18
CDC43YGL155W YCF1P39109 1515 aaKnown RBP7.69□□□□□ -1.18
CDC43YGL155W GTT3P39996 337 aa7.69□□□□□ -1.18
CDC43YGL155W MGA2P40578 1113 aa7.69□□□□□ -1.18
CDC43YGL155W STH1P32597 1359 aa7.68□□□□□ -1.18
CDC43YGL155W TRM732Q03496 1420 aa7.68□□□□□ -1.18
CDC43YGL155W SNQ2P32568 1501 aaKnown RBP7.67□□□□□ -1.18
CDC43YGL155W TY2B-LR1P0C2J3 1770 aa7.66□□□□□ -1.18
CDC43YGL155W TY2B-FP0CX63 1770 aa7.66□□□□□ -1.18
CDC43YGL155W TY2B-GR2P0CX64 1770 aa7.66□□□□□ -1.18
CDC43YGL155W TY2B-CP25384 1770 aa7.66□□□□□ -1.18
CDC43YGL155W TY2B-DR2Q03494 1770 aa7.66□□□□□ -1.18
CDC43YGL155W TY1B-DR1Q03855 1755 aa7.66□□□□□ -1.18
CDC43YGL155W TY2B-DR3Q07791 1770 aaKnown RBP7.66□□□□□ -1.18
CDC43YGL155W TY2B-OR1Q12113 1770 aa7.66□□□□□ -1.18
CDC43YGL155W TY2B-DR1Q12472 1770 aa7.66□□□□□ -1.18
CDC43YGL155W TY2B-OR2Q12501 1770 aa7.66□□□□□ -1.18
CDC43YGL155W MRM1P25270 412 aa7.65□□□□□ -1.18
CDC43YGL155W MLP2P40457 1679 aa7.64□□□□□ -1.19
CDC43YGL155W TY1B-DR3Q99231 1755 aa7.64□□□□□ -1.19
CDC43YGL155W TY2B-BQ12491 1770 aa7.6□□□□□ -1.19
CDC43YGL155W IFH1P39520 1085 aa7.58□□□□□ -1.2
CDC43YGL155W RGA2Q06407 1009 aa7.58□□□□□ -1.2
CDC43YGL155W SPP41P38904 1435 aa7.58□□□□□ -1.2
CDC43YGL155W PDR15Q04182 1529 aaKnown RBP7.57□□□□□ -1.2
CDC43YGL155W NUP170P38181 1502 aa7.57□□□□□ -1.2
CDC43YGL155W GEA1P47102 1408 aaPredicted RBP7.56□□□□□ -1.2
CDC43YGL155W RTG1P32607 177 aa7.55□□□□□ -1.2
CDC43YGL155W TY1B-HO13535 1793 aa7.54□□□□□ -1.2
CDC43YGL155W TY1B-DR5P0C2I2 1755 aa7.54□□□□□ -1.2
CDC43YGL155W TY1B-DR6P0C2I3 1755 aa7.54□□□□□ -1.2
CDC43YGL155W TY1B-LR2P0C2I5 1755 aa7.54□□□□□ -1.2
CDC43YGL155W TY1B-LR3P0C2I6 1755 aaKnown RBP7.54□□□□□ -1.2
CDC43YGL155W TY1B-PR1P0C2I9 1755 aaKnown RBP7.54□□□□□ -1.2
CDC43YGL155W TY1B-PR2P0C2J0 1756 aa7.54□□□□□ -1.2
CDC43YGL155W TY1B-PR3P0C2J1 1755 aaKnown RBP7.54□□□□□ -1.2
CDC43YGL155W TY1B-JR1P47098 1755 aa7.54□□□□□ -1.2
CDC43YGL155W TY1B-ML2Q03434 1755 aaKnown RBP7.54□□□□□ -1.2
CDC43YGL155W TY1B-ER1Q03612 1755 aa7.54□□□□□ -1.2
CDC43YGL155W TY1B-ML1Q04711 1755 aaKnown RBP7.54□□□□□ -1.2
CDC43YGL155W TY1B-GR2Q12269 1755 aa7.54□□□□□ -1.2
CDC43YGL155W TY1B-OLQ12273 1755 aa7.54□□□□□ -1.2
CDC43YGL155W TY1B-PLQ12414 1755 aaKnown RBP7.54□□□□□ -1.2
CDC43YGL155W NCR1Q12200 1170 aa7.54□□□□□ -1.2
CDC43YGL155W RQC2Q12532 1038 aaKnown RBP7.54□□□□□ -1.2
CDC43YGL155W RCR1P38212 213 aa7.53□□□□□ -1.2
CDC43YGL155W TY1B-BRQ12193 1756 aa7.52□□□□□ -1.21
CDC43YGL155W TY1B-GR3Q12316 1755 aa7.52□□□□□ -1.21
CDC43YGL155W TY1B-ORQ92393 1755 aa7.52□□□□□ -1.21
CDC43YGL155W PAN1P32521 1480 aa7.52□□□□□ -1.21
CDC43YGL155W SSM4P40318 1319 aa7.51□□□□□ -1.21
CDC43YGL155W ULS1Q08562 1619 aa7.5□□□□□ -1.21
CDC43YGL155W MSB4Q12317 492 aa7.5□□□□□ -1.21
CDC43YGL155W VTH1P40438 1549 aa7.5□□□□□ -1.21
CDC43YGL155W VTH2P40890 1549 aa7.5□□□□□ -1.21
CDC43YGL155W TSC11P40061 1430 aa7.5□□□□□ -1.21
CDC43YGL155W VPS29P38759 282 aa7.49□□□□□ -1.21
CDC43YGL155W PIB1Q06651 286 aa7.49□□□□□ -1.21
CDC43YGL155W CDC25P04821 1589 aa7.48□□□□□ -1.21
CDC43YGL155W BCK2P33306 851 aa7.48□□□□□ -1.21
CDC43YGL155W EAP1P36041 632 aaKnown RBP7.48□□□□□ -1.21
CDC43YGL155W RTG3P38165 486 aa7.47□□□□□ -1.21
CDC43YGL155W TRP5P00931 707 aaKnown RBP7.45□□□□□ -1.22
CDC43YGL155W RTT106P40161 455 aa7.45□□□□□ -1.22
CDC43YGL155W SNT2P53127 1403 aa7.44□□□□□ -1.22
CDC43YGL155W SEC61P32915 480 aa7.43□□□□□ -1.22
CDC43YGL155W TY1B-JR2P47100 1755 aaKnown RBP7.43□□□□□ -1.22
CDC43YGL155W TY1B-ER2Q03619 1755 aa7.43□□□□□ -1.22
CDC43YGL155W TY1B-MR1Q04214 1755 aa7.43□□□□□ -1.22
CDC43YGL155W TY1B-MR2Q04670 1755 aaKnown RBP7.43□□□□□ -1.22
CDC43YGL155W TY1B-LR1Q12088 1755 aaKnown RBP7.43□□□□□ -1.22
CDC43YGL155W TY1B-NL1Q12112 1755 aa7.43□□□□□ -1.22
CDC43YGL155W TY1B-GR1Q12141 1755 aa7.43□□□□□ -1.22
CDC43YGL155W TY1B-BLQ12490 1755 aa7.43□□□□□ -1.22
CDC43YGL155W STS1P38637 319 aa7.42□□□□□ -1.22
CDC43YGL155W POL5P39985 1022 aaKnown RBP7.41□□□□□ -1.22
CDC43YGL155W YMR1P47147 688 aaKnown RBP RIP-Chip data7.41□□□□□ -1.22not detected
CDC43YGL155W YNL035CP53962 389 aaKnown RBP7.41□□□□□ -1.22
CDC43YGL155W CAT8P39113 1433 aa7.41□□□□□ -1.22
CDC43YGL155W GEA2P39993 1459 aaKnown RBP7.41□□□□□ -1.22
CDC43YGL155W TY3B-GQ99315 1547 aa7.4□□□□□ -1.22
CDC43YGL155W ESC1Q03661 1658 aaKnown RBP7.4□□□□□ -1.23
CDC43YGL155W DBP1P24784 617 aaKnown RBP7.39□□□□□ -1.23
CDC43YGL155W YFR006WP43590 535 aa7.39□□□□□ -1.23
CDC43YGL155W YBT1P32386 1661 aa7.38□□□□□ -1.23
CDC43YGL155W VPS15P22219 1454 aa7.38□□□□□ -1.23
CDC43YGL155W RAM2P29703 316 aa7.38□□□□□ -1.23
CDC43YGL155W SET4P42948 560 aa7.38□□□□□ -1.23
Retrieved 100 of 5,963 RNA–protein pairs in 12.6 ms