RNA–Protein interactions for RNA: YGL048C

RPT6, Transcript of ATPase of the 19S regulatory particle of the 26S proteasome, yeastyeast

Gene RPT6, Length 1,218 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPT6YGL048C TY1B-GR2Q12269 1755 aa8.88□□□□□ -0.99
RPT6YGL048C TY1B-OLQ12273 1755 aa8.88□□□□□ -0.99
RPT6YGL048C TY1B-PLQ12414 1755 aaKnown RBP8.88□□□□□ -0.99
RPT6YGL048C TY1B-DR3Q99231 1755 aa8.88□□□□□ -0.99
RPT6YGL048C ESC1Q03661 1658 aaKnown RBP8.88□□□□□ -0.99
RPT6YGL048C LTE1P07866 1435 aa8.86□□□□□ -0.99
RPT6YGL048C SPP41P38904 1435 aa8.83□□□□□ -1
RPT6YGL048C TRM732Q03496 1420 aa8.83□□□□□ -1
RPT6YGL048C DCD1P06773 312 aa8.82□□□□□ -1
RPT6YGL048C OXP1P28273 1286 aa8.8□□□□□ -1
RPT6YGL048C YIL055CP40523 627 aaKnown RBP8.8□□□□□ -1
RPT6YGL048C UBP10P53874 792 aaPredicted RBP8.79□□□□□ -1
RPT6YGL048C TSC11P40061 1430 aa8.79□□□□□ -1
RPT6YGL048C BNI1P41832 1953 aa8.76□□□□□ -1.01
RPT6YGL048C ITT1Q04638 464 aa8.76□□□□□ -1.01
RPT6YGL048C NUP159P40477 1460 aa8.76□□□□□ -1.01
RPT6YGL048C PTP3P40048 928 aa8.74□□□□□ -1.01
RPT6YGL048C TAF7Q05021 590 aa8.74□□□□□ -1.01
RPT6YGL048C GEA2P39993 1459 aaKnown RBP8.73□□□□□ -1.01
RPT6YGL048C VTH1P40438 1549 aa8.73□□□□□ -1.01
RPT6YGL048C VTH2P40890 1549 aa8.73□□□□□ -1.01
RPT6YGL048C TY1B-JR2P47100 1755 aaKnown RBP8.71□□□□□ -1.02
RPT6YGL048C TY1B-ER2Q03619 1755 aa8.71□□□□□ -1.02
RPT6YGL048C TY1B-MR1Q04214 1755 aa8.71□□□□□ -1.02
RPT6YGL048C TY1B-MR2Q04670 1755 aaKnown RBP8.71□□□□□ -1.02
RPT6YGL048C TY1B-LR1Q12088 1755 aaKnown RBP8.71□□□□□ -1.02
RPT6YGL048C TY1B-NL1Q12112 1755 aa8.71□□□□□ -1.02
RPT6YGL048C TY1B-GR1Q12141 1755 aa8.71□□□□□ -1.02
RPT6YGL048C TY1B-BLQ12490 1755 aa8.71□□□□□ -1.02
RPT6YGL048C YRF1-1P0CX20 1796 aa8.7□□□□□ -1.02
RPT6YGL048C YRF1-5P0CX21 1796 aa8.7□□□□□ -1.02
RPT6YGL048C YRF1-8P0CX22 1796 aa8.7□□□□□ -1.02
RPT6YGL048C YTA7P40340 1379 aa8.7□□□□□ -1.02
RPT6YGL048C MYO4P32492 1471 aa8.7□□□□□ -1.02
RPT6YGL048C MAP2P38174 421 aaKnown RBP8.69□□□□□ -1.02
RPT6YGL048C VPS15P22219 1454 aa8.69□□□□□ -1.02
RPT6YGL048C BCH2P36122 765 aa8.67□□□□□ -1.02
RPT6YGL048C SNT2P53127 1403 aa8.66□□□□□ -1.02
RPT6YGL048C MIF2P35201 549 aa8.65□□□□□ -1.02
RPT6YGL048C YAH1Q12184 172 aaKnown RBP8.65□□□□□ -1.02
RPT6YGL048C NTE1Q04958 1679 aa8.63□□□□□ -1.03
RPT6YGL048C SNQ2P32568 1501 aaKnown RBP8.63□□□□□ -1.03
RPT6YGL048C DRS2P39524 1355 aa8.62□□□□□ -1.03
RPT6YGL048C RSM7P47150 247 aa8.62□□□□□ -1.03
RPT6YGL048C SCY1P53009 804 aa8.62□□□□□ -1.03
RPT6YGL048C RPO21P04050 1733 aaKnown RBP8.62□□□□□ -1.03
RPT6YGL048C MMS1Q06211 1407 aa8.61□□□□□ -1.03
RPT6YGL048C STH1P32597 1359 aa8.6□□□□□ -1.03
RPT6YGL048C SSP1P38871 571 aa8.59□□□□□ -1.03
RPT6YGL048C MET10P39692 1035 aa8.59□□□□□ -1.03
RPT6YGL048C ARP8Q12386 881 aaKnown RBP RIP-Chip data8.57□□□□□ -1.04not detected
RPT6YGL048C ABP1P15891 592 aaKnown RBP8.55□□□□□ -1.04
RPT6YGL048C BBC1P47068 1157 aa8.54□□□□□ -1.04
RPT6YGL048C SLX5P32828 619 aaKnown RBP8.53□□□□□ -1.04
RPT6YGL048C PDR12Q02785 1511 aa8.53□□□□□ -1.04
RPT6YGL048C YLR271WQ06152 274 aa8.52□□□□□ -1.05
RPT6YGL048C EPS1P40557 701 aa8.5□□□□□ -1.05
RPT6YGL048C RTT106P40161 455 aa8.49□□□□□ -1.05
RPT6YGL048C NUP170P38181 1502 aa8.49□□□□□ -1.05
RPT6YGL048C AI2P03876 854 aa8.48□□□□□ -1.05
RPT6YGL048C TIF4632P39936 914 aaKnown RBP8.48□□□□□ -1.05
RPT6YGL048C SPO14P36126 1683 aa8.48□□□□□ -1.05
RPT6YGL048C IRC20Q06554 1556 aa8.45□□□□□ -1.06
RPT6YGL048C ULS1Q08562 1619 aa8.45□□□□□ -1.06
RPT6YGL048C BDF1P35817 686 aa8.45□□□□□ -1.06
RPT6YGL048C NUP157P40064 1391 aaKnown RBP8.44□□□□□ -1.06
RPT6YGL048C GDB1Q06625 1536 aa8.44□□□□□ -1.06
RPT6YGL048C IQG1Q12280 1495 aa8.43□□□□□ -1.06
RPT6YGL048C SAS10Q12136 610 aaPredicted RBP8.42□□□□□ -1.06
RPT6YGL048C DNF2Q12675 1612 aa8.42□□□□□ -1.06
RPT6YGL048C PDR15Q04182 1529 aaKnown RBP8.41□□□□□ -1.06
RPT6YGL048C MLP2P40457 1679 aa8.4□□□□□ -1.06
RPT6YGL048C TRM3Q07527 1436 aa8.38□□□□□ -1.07
RPT6YGL048C TGL3P40308 642 aa8.38□□□□□ -1.07
RPT6YGL048C YFR006WP43590 535 aa8.38□□□□□ -1.07
RPT6YGL048C PDR10P51533 1564 aa8.37□□□□□ -1.07
RPT6YGL048C MGA2P40578 1113 aa8.36□□□□□ -1.07
RPT6YGL048C PSD2P53037 1138 aaKnown RBP8.36□□□□□ -1.07
RPT6YGL048C BUD3P25558 1636 aa8.33□□□□□ -1.08
RPT6YGL048C IFH1P39520 1085 aa8.33□□□□□ -1.08
RPT6YGL048C DOP1Q03921 1698 aa8.32□□□□□ -1.08
RPT6YGL048C GEA1P47102 1408 aaPredicted RBP8.31□□□□□ -1.08
RPT6YGL048C ARO1P08566 1588 aaKnown RBP8.31□□□□□ -1.08
RPT6YGL048C CAT8P39113 1433 aa8.29□□□□□ -1.08
RPT6YGL048C TY3B-GQ99315 1547 aa8.29□□□□□ -1.08
RPT6YGL048C YSP2Q06681 1438 aa8.27□□□□□ -1.09
RPT6YGL048C CST9Q06032 482 aa8.22□□□□□ -1.09
RPT6YGL048C YOR093CQ12275 1648 aa8.21□□□□□ -1.1
RPT6YGL048C MRM1P25270 412 aa8.2□□□□□ -1.1
RPT6YGL048C CKB1P43639 278 aa8.2□□□□□ -1.1
RPT6YGL048C YBT1P32386 1661 aa8.2□□□□□ -1.1
RPT6YGL048C CHC1P22137 1653 aaKnown RBP8.19□□□□□ -1.1
RPT6YGL048C NSR1P27476 414 aaKnown RBP RIP-Chip data8.19□□□□□ -1.1not detected
RPT6YGL048C YAP3P38749 330 aa8.18□□□□□ -1.1
RPT6YGL048C SEC7P11075 2009 aaKnown RBP8.18□□□□□ -1.1
RPT6YGL048C BNR1P40450 1375 aa8.18□□□□□ -1.1
RPT6YGL048C YAP5P40574 245 aa8.13□□□□□ -1.11
RPT6YGL048C DNF3Q12674 1656 aa8.11□□□□□ -1.11
RPT6YGL048C RTG3P38165 486 aa8.11□□□□□ -1.11
RPT6YGL048C YOR238WQ08634 303 aa8.11□□□□□ -1.11
Retrieved 100 of 5,963 RNA–protein pairs in 15.5 ms