RNA–Protein interactions for RNA: YGL006W

PMC1, Transcript of Vacuolar Ca2+ ATPase involved in depleting cytosol of Ca2+ ions, yeastyeast

Gene PMC1, Length 3,522 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PMC1YGL006W KOG1P38873 1557 aa5.24□□□□□ -1.57
PMC1YGL006W VPS27P40343 622 aaKnown RBP5.24□□□□□ -1.57
PMC1YGL006W CDC45Q08032 650 aa5.24□□□□□ -1.57
PMC1YGL006W SRB8P25648 1427 aa5.24□□□□□ -1.57
PMC1YGL006W TCB2P48231 1178 aa5.23□□□□□ -1.57
PMC1YGL006W YGL081WP53156 320 aa5.23□□□□□ -1.57
PMC1YGL006W SNF7P39929 240 aaKnown RBP5.23□□□□□ -1.57
PMC1YGL006W AVT3P36062 692 aa5.22□□□□□ -1.57
PMC1YGL006W YPP1P46951 817 aa5.21□□□□□ -1.58
PMC1YGL006W DAL5P15365 543 aa5.21□□□□□ -1.58
PMC1YGL006W MPP10P47083 593 aaKnown RBP5.21□□□□□ -1.58
PMC1YGL006W ROX1P25042 368 aa5.2□□□□□ -1.58
PMC1YGL006W SIS2P36024 562 aa5.2□□□□□ -1.58
PMC1YGL006W RLF2Q12495 606 aa5.2□□□□□ -1.58
PMC1YGL006W MLP2P40457 1679 aa5.2□□□□□ -1.58
PMC1YGL006W DNF1P32660 1571 aa5.2□□□□□ -1.58
PMC1YGL006W RPO31P04051 1460 aa5.2□□□□□ -1.58
PMC1YGL006W IQG1Q12280 1495 aa5.19□□□□□ -1.58
PMC1YGL006W RTG3P38165 486 aa5.19□□□□□ -1.58
PMC1YGL006W ATG2P53855 1592 aa5.19□□□□□ -1.58
PMC1YGL006W MDS3P53094 1487 aa5.19□□□□□ -1.58
PMC1YGL006W RAD2P07276 1031 aa5.18□□□□□ -1.58
PMC1YGL006W PCT1P13259 424 aa5.18□□□□□ -1.58
PMC1YGL006W SLN1P39928 1220 aaPredicted RBP5.18□□□□□ -1.58
PMC1YGL006W NUP170P38181 1502 aa5.17□□□□□ -1.58
PMC1YGL006W ARL1P38116 183 aaKnown RBP5.17□□□□□ -1.58
PMC1YGL006W SUI2P20459 304 aaKnown RBP5.17□□□□□ -1.58
PMC1YGL006W NUP159P40477 1460 aa5.17□□□□□ -1.58
PMC1YGL006W PEP1P32319 1579 aa5.17□□□□□ -1.58
PMC1YGL006W VPS24P36095 224 aaKnown RBP5.16□□□□□ -1.58
PMC1YGL006W YLR419WQ06698 1435 aaKnown RBP5.16□□□□□ -1.58
PMC1YGL006W SPE2P21182 396 aa5.16□□□□□ -1.58
PMC1YGL006W PAP2P53632 584 aaKnown RBP5.15□□□□□ -1.58
PMC1YGL006W CTR9P89105 1077 aa5.15□□□□□ -1.58
PMC1YGL006W CSE4P36012 229 aa5.15□□□□□ -1.58
PMC1YGL006W CHZ1P40019 153 aaPredicted RBP5.15□□□□□ -1.58
PMC1YGL006W RTR1P40084 226 aaPredicted RBP5.15□□□□□ -1.58
PMC1YGL006W PUF6Q04373 656 aaKnown RBP5.15□□□□□ -1.59
PMC1YGL006W TRK1P12685 1235 aa5.14□□□□□ -1.59
PMC1YGL006W NAP1P25293 417 aaKnown RBP5.14□□□□□ -1.59
PMC1YGL006W YCK3P39962 524 aa5.14□□□□□ -1.59
PMC1YGL006W MDG1P53885 366 aa5.14□□□□□ -1.59
PMC1YGL006W TPD3P31383 635 aa5.14□□□□□ -1.59
PMC1YGL006W ESL2P36168 1195 aa5.14□□□□□ -1.59
PMC1YGL006W RNA1P11745 407 aaKnown RBP5.13□□□□□ -1.59
PMC1YGL006W NOP58Q12499 511 aaKnown RBP5.13□□□□□ -1.59
PMC1YGL006W QCR6P00127 147 aa5.12□□□□□ -1.59
PMC1YGL006W GDB1Q06625 1536 aa5.12□□□□□ -1.59
PMC1YGL006W TY3B-GQ99315 1547 aa5.12□□□□□ -1.59
PMC1YGL006W MSP1P28737 362 aa5.11□□□□□ -1.59
PMC1YGL006W GEA2P39993 1459 aaKnown RBP5.11□□□□□ -1.59
PMC1YGL006W RPP0P05317 312 aaKnown RBP5.11□□□□□ -1.59
PMC1YGL006W TAF8Q03750 510 aa5.11□□□□□ -1.59
PMC1YGL006W COG8Q04632 607 aa5.11□□□□□ -1.59
PMC1YGL006W MFT1P33441 392 aaKnown RBP5.1□□□□□ -1.59
PMC1YGL006W MET10P39692 1035 aa5.1□□□□□ -1.59
PMC1YGL006W ULS1Q08562 1619 aa5.1□□□□□ -1.59
PMC1YGL006W VTH1P40438 1549 aa5.1□□□□□ -1.59
PMC1YGL006W VTH2P40890 1549 aa5.1□□□□□ -1.59
PMC1YGL006W SPB4P25808 606 aaPredicted RBP5.1□□□□□ -1.59
PMC1YGL006W ITC1P53125 1264 aa5.1□□□□□ -1.59
PMC1YGL006W POL32P47110 350 aa5.1□□□□□ -1.59
PMC1YGL006W MMS1Q06211 1407 aa5.09□□□□□ -1.59
PMC1YGL006W ESC2Q06340 456 aa5.09□□□□□ -1.59
PMC1YGL006W KAR2P16474 682 aaKnown RBP5.09□□□□□ -1.6
PMC1YGL006W RAD26P40352 1085 aa5.09□□□□□ -1.6
PMC1YGL006W SAP155P43612 1002 aa5.09□□□□□ -1.6
PMC1YGL006W NUP157P40064 1391 aaKnown RBP5.08□□□□□ -1.6
PMC1YGL006W ABP1P15891 592 aaKnown RBP5.08□□□□□ -1.6
PMC1YGL006W RSC1P53236 928 aa5.08□□□□□ -1.6
PMC1YGL006W IOC4Q04213 475 aa5.08□□□□□ -1.6
PMC1YGL006W SPT21P35209 758 aa5.08□□□□□ -1.6
PMC1YGL006W KRI1P42846 591 aaKnown RBP5.08□□□□□ -1.6
PMC1YGL006W CAT8P39113 1433 aa5.07□□□□□ -1.6
PMC1YGL006W ARO1P08566 1588 aaKnown RBP5.07□□□□□ -1.6
PMC1YGL006W KNS1P32350 737 aaPredicted RBP5.07□□□□□ -1.6
PMC1YGL006W SCT1P32784 759 aa5.07□□□□□ -1.6
PMC1YGL006W TPM2P40414 161 aa5.07□□□□□ -1.6
PMC1YGL006W YBR287WP38355 427 aa5.06□□□□□ -1.6
PMC1YGL006W TEA1P47988 759 aa5.06□□□□□ -1.6
PMC1YGL006W SRS2P12954 1174 aa5.06□□□□□ -1.6
PMC1YGL006W NAB6Q03735 1134 aaKnown RBP RIP-Chip data5.06□□□□□ -1.6not detected
PMC1YGL006W BUD3P25558 1636 aa5.06□□□□□ -1.6
PMC1YGL006W MIC60P36112 540 aa5.06□□□□□ -1.6
PMC1YGL006W YEF3P16521 1044 aaKnown RBP5.05□□□□□ -1.6
PMC1YGL006W SWE1P32944 819 aa5.05□□□□□ -1.6
PMC1YGL006W RFC1P38630 861 aaKnown RBP5.05□□□□□ -1.6
PMC1YGL006W YIR014WP40570 242 aa5.05□□□□□ -1.6
PMC1YGL006W DRS2P39524 1355 aa5.05□□□□□ -1.6
PMC1YGL006W CLB5P30283 435 aa5.05□□□□□ -1.6
PMC1YGL006W YIL092WP40497 633 aa5.05□□□□□ -1.6
PMC1YGL006W CWC22P53333 577 aaKnown RBP5.05□□□□□ -1.6
PMC1YGL006W LCD1Q04377 747 aa5.05□□□□□ -1.6
PMC1YGL006W SNT2P53127 1403 aa5.05□□□□□ -1.6
PMC1YGL006W NOT3P06102 836 aaKnown RBP5.04□□□□□ -1.6
PMC1YGL006W YGR130CP53278 816 aa5.03□□□□□ -1.6
PMC1YGL006W MAK21Q12176 1025 aaKnown RBP5.03□□□□□ -1.6
PMC1YGL006W RTC1Q08281 1341 aa5.03□□□□□ -1.6
PMC1YGL006W LTE1P07866 1435 aa5.03□□□□□ -1.6
PMC1YGL006W MCM2P29469 868 aa5.03□□□□□ -1.6
Retrieved 100 of 5,963 RNA–protein pairs in 12.1 ms