RNA–Protein interactions for RNA: YFR049W

YMR31, Transcript of Mitochondrial ribosomal protein of the small subunit, yeast

Gene YMR31, Length 372 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YMR31	YFR049W	BRL1	P38770	471 aa		4.32	□□□□□ -1.72
YMR31	YFR049W	HPC2	Q01448	625 aa		4.32	□□□□□ -1.72
YMR31	YFR049W	KIC1	P38692	1080 aa		4.31	□□□□□ -1.72
YMR31	YFR049W	ATH1	P48016	1211 aa		4.3	□□□□□ -1.72
YMR31	YFR049W	PKC1	P24583	1151 aa		4.29	□□□□□ -1.72
YMR31	YFR049W	YJL007C	P47080	104 aa		4.29	□□□□□ -1.72
YMR31	YFR049W	SSA2	P10592	639 aa	Known RBP	4.28	□□□□□ -1.72
YMR31	YFR049W	UBP14	P38237	781 aa	Known RBP	4.28	□□□□□ -1.72
YMR31	YFR049W	CSN12	P47130	423 aa		4.28	□□□□□ -1.72
YMR31	YFR049W	YDR090C	Q03193	310 aa		4.28	□□□□□ -1.72
YMR31	YFR049W	BIM1	P40013	344 aa		4.26	□□□□□ -1.73
YMR31	YFR049W	YLR326W	Q06170	240 aa	Known RBP	4.26	□□□□□ -1.73
YMR31	YFR049W	GRE2	Q12068	342 aa	Known RBP	4.26	□□□□□ -1.73
YMR31	YFR049W	SSA1	P10591	642 aa	Known RBP	4.25	□□□□□ -1.73
YMR31	YFR049W	VMA1	P17255	1071 aa	Known RBP	4.25	□□□□□ -1.73
YMR31	YFR049W	RAD54	P32863	898 aa		4.25	□□□□□ -1.73
YMR31	YFR049W	YML020W	Q03722	664 aa		4.25	□□□□□ -1.73
YMR31	YFR049W	GUT1	P32190	709 aa		4.24	□□□□□ -1.73
YMR31	YFR049W	TIF4632	P39936	914 aa	Known RBP	4.24	□□□□□ -1.73
YMR31	YFR049W	SLX8	P40072	274 aa		4.24	□□□□□ -1.73
YMR31	YFR049W	RPL34B	P40525	121 aa	Known RBP	4.24	□□□□□ -1.73
YMR31	YFR049W	YAP5	P40574	245 aa		4.24	□□□□□ -1.73
YMR31	YFR049W	SUB2	Q07478	446 aa	Known RBP	4.24	□□□□□ -1.73
YMR31	YFR049W	PSE1	P32337	1089 aa	Known RBP	4.23	□□□□□ -1.73
YMR31	YFR049W	GEF1	P37020	779 aa		4.23	□□□□□ -1.73
YMR31	YFR049W	ATG32	P40458	529 aa		4.23	□□□□□ -1.73
YMR31	YFR049W	TEA1	P47988	759 aa		4.23	□□□□□ -1.73
YMR31	YFR049W	YGR273C	P53329	174 aa		4.23	□□□□□ -1.73
YMR31	YFR049W	PCS60	P38137	543 aa	Known RBP RIP-Chip data	4.22	□□□□□ -1.73	not detected
YMR31	YFR049W	TYW1	Q08960	810 aa	Known RBP	4.22	□□□□□ -1.73
YMR31	YFR049W	KEX1	P09620	729 aa		4.21	□□□□□ -1.74
YMR31	YFR049W	GLN1	P32288	370 aa	Known RBP	4.21	□□□□□ -1.74
YMR31	YFR049W	SSA4	P22202	642 aa	Known RBP	4.2	□□□□□ -1.74
YMR31	YFR049W	YBL036C	P38197	257 aa		4.2	□□□□□ -1.74
YMR31	YFR049W	ERG12	P07277	443 aa		4.19	□□□□□ -1.74
YMR31	YFR049W	TIF1	P10081	395 aa	Known RBP	4.19	□□□□□ -1.74
YMR31	YFR049W	KTR1	P27810	393 aa	Known RBP	4.19	□□□□□ -1.74
YMR31	YFR049W	GYP5	Q12344	894 aa		4.19	□□□□□ -1.74
YMR31	YFR049W	NSR1	P27476	414 aa	Known RBP RIP-Chip data	4.18	□□□□□ -1.74	not detected
YMR31	YFR049W	CPS1	P27614	576 aa		4.18	□□□□□ -1.74
YMR31	YFR049W	DCW1	P36091	449 aa		4.18	□□□□□ -1.74
YMR31	YFR049W	YMR196W	Q04336	1088 aa		4.18	□□□□□ -1.74
YMR31	YFR049W	YPR204W	Q08995	1032 aa		4.18	□□□□□ -1.74
YMR31	YFR049W	RTG2	P32608	588 aa	Known RBP	4.17	□□□□□ -1.74
YMR31	YFR049W	ORC6	P38826	435 aa		4.17	□□□□□ -1.74
YMR31	YFR049W	SOL3	P38858	249 aa		4.17	□□□□□ -1.74
YMR31	YFR049W	RPL34A	P87262	121 aa	Predicted RBP	4.17	□□□□□ -1.74
YMR31	YFR049W	RGR1	P19263	1082 aa		4.16	□□□□□ -1.74
YMR31	YFR049W	GTT3	P39996	337 aa		4.16	□□□□□ -1.74
YMR31	YFR049W	YNL108C	P53929	270 aa		4.16	□□□□□ -1.74
YMR31	YFR049W	PKH3	Q03306	898 aa	Predicted RBP	4.16	□□□□□ -1.74
YMR31	YFR049W	NOP8	Q08287	484 aa	Predicted RBP	4.16	□□□□□ -1.74
YMR31	YFR049W	SAM3	Q08986	587 aa		4.16	□□□□□ -1.74
YMR31	YFR049W	TGL3	P40308	642 aa		4.15	□□□□□ -1.75
YMR31	YFR049W	MMP1	Q12372	583 aa		4.15	□□□□□ -1.75
YMR31	YFR049W	ESS1	P22696	170 aa		4.14	□□□□□ -1.75
YMR31	YFR049W	SCJ1	P25303	377 aa		4.14	□□□□□ -1.75
YMR31	YFR049W	CLB5	P30283	435 aa		4.14	□□□□□ -1.75
YMR31	YFR049W	BIO2	P32451	375 aa		4.14	□□□□□ -1.75
YMR31	YFR049W	MVP1	P40959	511 aa	Known RBP	4.14	□□□□□ -1.75
YMR31	YFR049W	FPK1	P53739	893 aa		4.14	□□□□□ -1.75
YMR31	YFR049W	NIS1	P53939	407 aa		4.14	□□□□□ -1.75
YMR31	YFR049W	SLD2	P34252	453 aa		4.13	□□□□□ -1.75
YMR31	YFR049W	TTI1	P36097	1038 aa		4.13	□□□□□ -1.75
YMR31	YFR049W	YPR109W	Q06104	294 aa		4.13	□□□□□ -1.75
YMR31	YFR049W	RAD59	Q12223	238 aa		4.13	□□□□□ -1.75
YMR31	YFR049W	HTA1	P04911	132 aa	Known RBP	4.12	□□□□□ -1.75
YMR31	YFR049W	HTA2	P04912	132 aa		4.12	□□□□□ -1.75
YMR31	YFR049W	RPP1B	P10622	106 aa	Known RBP	4.12	□□□□□ -1.75
YMR31	YFR049W	ARG8	P18544	423 aa		4.12	□□□□□ -1.75
YMR31	YFR049W	SET4	P42948	560 aa		4.12	□□□□□ -1.75
YMR31	YFR049W	HST2	P53686	357 aa		4.12	□□□□□ -1.75
YMR31	YFR049W	YJU3	P28321	313 aa		4.11	□□□□□ -1.75
YMR31	YFR049W	CSE4	P36012	229 aa		4.11	□□□□□ -1.75
YMR31	YFR049W	AIM44	Q99299	758 aa		4.11	□□□□□ -1.75
YMR31	YFR049W	MPH3	P0CE00	602 aa		4.1	□□□□□ -1.75
YMR31	YFR049W	CDC3	P32457	520 aa	Known RBP	4.1	□□□□□ -1.75
YMR31	YFR049W	PEX21	P50091	288 aa		4.1	□□□□□ -1.75
YMR31	YFR049W	CSC1	Q06538	782 aa		4.1	□□□□□ -1.75
YMR31	YFR049W	YOL036W	Q08206	761 aa		4.1	□□□□□ -1.75
YMR31	YFR049W	NOB1	Q08444	459 aa	Known RBP	4.1	□□□□□ -1.75
YMR31	YFR049W	AI4	P03878	556 aa		4.09	□□□□□ -1.75
YMR31	YFR049W	SLI15	P38283	698 aa		4.09	□□□□□ -1.75
YMR31	YFR049W	ILV3	P39522	585 aa	Known RBP	4.09	□□□□□ -1.75
YMR31	YFR049W	NST1	P53935	1240 aa		4.09	□□□□□ -1.75
YMR31	YFR049W	YDJ1	P25491	409 aa	Known RBP	4.08	□□□□□ -1.76
YMR31	YFR049W	NOP7	P53261	605 aa	Known RBP	4.08	□□□□□ -1.76
YMR31	YFR049W	YML083C	Q04526	418 aa		4.08	□□□□□ -1.76
YMR31	YFR049W	CDC73	Q06697	393 aa		4.08	□□□□□ -1.76
YMR31	YFR049W	ENO1	P00924	437 aa	Known RBP	4.07	□□□□□ -1.76
YMR31	YFR049W	ENO2	P00925	437 aa	Known RBP	4.07	□□□□□ -1.76
YMR31	YFR049W	SUP45	P12385	437 aa	Known RBP	4.07	□□□□□ -1.76
YMR31	YFR049W	SLY41	P22215	453 aa		4.07	□□□□□ -1.76
YMR31	YFR049W	DAN4	P47179	1161 aa		4.07	□□□□□ -1.76
YMR31	YFR049W	TUM1	Q08686	304 aa	Known RBP	4.07	□□□□□ -1.76
YMR31	YFR049W	HAT1	Q12341	374 aa		4.07	□□□□□ -1.76
YMR31	YFR049W	GAP1	P19145	602 aa	Predicted RBP	4.06	□□□□□ -1.76
YMR31	YFR049W	PUP1	P25043	261 aa		4.06	□□□□□ -1.76
YMR31	YFR049W	YEL023C	P39992	682 aa		4.06	□□□□□ -1.76
YMR31	YFR049W	TFB4	Q12004	338 aa		4.06	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 11.5 ms