RNA–Protein interactions for RNA: YFR038W

IRC5, Transcript of Putative ATPase containing the DEAD/H helicase-related sequence motif, yeastyeast

Gene IRC5, Length 2,562 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
IRC5YFR038W TY1B-BLQ12490 1755 aa10.01□□□□□ -0.81
IRC5YFR038W TY3B-GQ99315 1547 aa9.98□□□□□ -0.81
IRC5YFR038W SSM4P40318 1319 aa9.98□□□□□ -0.81
IRC5YFR038W ESC1Q03661 1658 aaKnown RBP9.97□□□□□ -0.81
IRC5YFR038W IFH1P39520 1085 aa9.96□□□□□ -0.81
IRC5YFR038W RQC2Q12532 1038 aaKnown RBP9.95□□□□□ -0.82
IRC5YFR038W RPA190P10964 1664 aaKnown RBP9.91□□□□□ -0.82
IRC5YFR038W DNF1P32660 1571 aa9.9□□□□□ -0.83
IRC5YFR038W IRC20Q06554 1556 aa9.9□□□□□ -0.83
IRC5YFR038W YBT1P32386 1661 aa9.89□□□□□ -0.83
IRC5YFR038W NTE1Q04958 1679 aa9.89□□□□□ -0.83
IRC5YFR038W RPO21P04050 1733 aaKnown RBP9.88□□□□□ -0.83
IRC5YFR038W GEA2P39993 1459 aaKnown RBP9.87□□□□□ -0.83
IRC5YFR038W VPS15P22219 1454 aa9.85□□□□□ -0.83
IRC5YFR038W CAT8P39113 1433 aa9.83□□□□□ -0.84
IRC5YFR038W RTT106P40161 455 aa9.77□□□□□ -0.85
IRC5YFR038W NUP159P40477 1460 aa9.77□□□□□ -0.85
IRC5YFR038W PDR12Q02785 1511 aa9.74□□□□□ -0.85
IRC5YFR038W GDB1Q06625 1536 aa9.74□□□□□ -0.85
IRC5YFR038W ARO1P08566 1588 aaKnown RBP9.73□□□□□ -0.85
IRC5YFR038W PDR10P51533 1564 aa9.72□□□□□ -0.85
IRC5YFR038W SRB8P25648 1427 aa9.71□□□□□ -0.86
IRC5YFR038W YRF1-1P0CX20 1796 aa9.7□□□□□ -0.86
IRC5YFR038W YRF1-5P0CX21 1796 aa9.7□□□□□ -0.86
IRC5YFR038W YRF1-8P0CX22 1796 aa9.7□□□□□ -0.86
IRC5YFR038W SPO14P36126 1683 aa9.69□□□□□ -0.86
IRC5YFR038W MET10P39692 1035 aa9.66□□□□□ -0.86
IRC5YFR038W MTC1P47018 478 aaKnown RBP9.65□□□□□ -0.86
IRC5YFR038W MET5P47169 1442 aa9.64□□□□□ -0.87
IRC5YFR038W GCN2P15442 1659 aa9.64□□□□□ -0.87
IRC5YFR038W NUP157P40064 1391 aaKnown RBP9.63□□□□□ -0.87
IRC5YFR038W YSP2Q06681 1438 aa9.6□□□□□ -0.87
IRC5YFR038W CKB1P43639 278 aa9.59□□□□□ -0.87
IRC5YFR038W BUD3P25558 1636 aa9.58□□□□□ -0.88
IRC5YFR038W IQG1Q12280 1495 aa9.57□□□□□ -0.88
IRC5YFR038W MMS1Q06211 1407 aa9.57□□□□□ -0.88
IRC5YFR038W POL5P39985 1022 aaKnown RBP9.55□□□□□ -0.88
IRC5YFR038W NSR1P27476 414 aaKnown RBP RIP-Chip data9.53□□□□□ -0.88not detected
IRC5YFR038W PDR5P33302 1511 aaKnown RBP9.53□□□□□ -0.88
IRC5YFR038W BUD21Q08492 214 aaPredicted RBP9.52□□□□□ -0.89
IRC5YFR038W SEC7P11075 2009 aaKnown RBP9.47□□□□□ -0.89
IRC5YFR038W YOR093CQ12275 1648 aa9.47□□□□□ -0.89
IRC5YFR038W CHC1P22137 1653 aaKnown RBP9.43□□□□□ -0.9
IRC5YFR038W BNR1P40450 1375 aa9.43□□□□□ -0.9
IRC5YFR038W NOP7P53261 605 aaKnown RBP9.42□□□□□ -0.9
IRC5YFR038W LTE1P07866 1435 aa9.4□□□□□ -0.9
IRC5YFR038W SEC3P33332 1336 aaKnown RBP9.4□□□□□ -0.9
IRC5YFR038W ENP1P38333 483 aaKnown RBP9.39□□□□□ -0.91
IRC5YFR038W DOP1Q03921 1698 aa9.36□□□□□ -0.91
IRC5YFR038W SPT7P35177 1332 aa9.36□□□□□ -0.91
IRC5YFR038W TRM3Q07527 1436 aa9.36□□□□□ -0.91
IRC5YFR038W VMR1P38735 1592 aa9.36□□□□□ -0.91
IRC5YFR038W PAF1P38351 445 aa9.35□□□□□ -0.91
IRC5YFR038W BFR2Q06631 534 aaKnown RBP9.35□□□□□ -0.91
IRC5YFR038W PDR11P40550 1411 aa9.34□□□□□ -0.91
IRC5YFR038W RAV1P47104 1357 aa9.34□□□□□ -0.91
IRC5YFR038W TY3B-IQ7LHG5 1498 aaKnown RBP9.34□□□□□ -0.91
IRC5YFR038W NUP188P52593 1655 aaKnown RBP9.32□□□□□ -0.92
IRC5YFR038W RTC1Q08281 1341 aa9.31□□□□□ -0.92
IRC5YFR038W MHP1P43638 1398 aa9.31□□□□□ -0.92
IRC5YFR038W IML1P47170 1584 aa9.28□□□□□ -0.92
IRC5YFR038W NOP2P40991 618 aaKnown RBP9.27□□□□□ -0.92
IRC5YFR038W DRS2P39524 1355 aa9.26□□□□□ -0.93
IRC5YFR038W NUP192P47054 1683 aa9.25□□□□□ -0.93
IRC5YFR038W DNF2Q12675 1612 aa9.23□□□□□ -0.93
IRC5YFR038W YLR419WQ06698 1435 aaKnown RBP9.22□□□□□ -0.93
IRC5YFR038W ORC1P54784 914 aaPredicted RBP9.2□□□□□ -0.94
IRC5YFR038W BNI1P41832 1953 aa9.2□□□□□ -0.94
IRC5YFR038W PSD2P53037 1138 aaKnown RBP9.2□□□□□ -0.94
IRC5YFR038W TAF5P38129 798 aa9.18□□□□□ -0.94
IRC5YFR038W ESL2P36168 1195 aa9.17□□□□□ -0.94
IRC5YFR038W PRS1P32895 427 aaKnown RBP9.17□□□□□ -0.94
IRC5YFR038W KIP3P53086 805 aaKnown RBP9.14□□□□□ -0.95
IRC5YFR038W PDS5Q04264 1277 aa9.14□□□□□ -0.95
IRC5YFR038W ITT1Q04638 464 aa9.14□□□□□ -0.95
IRC5YFR038W LEU3P08638 886 aa9.13□□□□□ -0.95
IRC5YFR038W TYS1P36421 394 aaKnown RBP9.12□□□□□ -0.95
IRC5YFR038W IPL1P38991 367 aa9.12□□□□□ -0.95
IRC5YFR038W BCK1Q01389 1478 aa9.08□□□□□ -0.96
IRC5YFR038W URN1Q06525 465 aaKnown RBP9.08□□□□□ -0.96
IRC5YFR038W NST1P53935 1240 aa9.08□□□□□ -0.96
IRC5YFR038W SPE2P21182 396 aa9.07□□□□□ -0.96
IRC5YFR038W HAP1P0CE41 1502 aa9.07□□□□□ -0.96
IRC5YFR038W SCT1P32784 759 aa9.06□□□□□ -0.96
IRC5YFR038W YAP3P38749 330 aa9.06□□□□□ -0.96
IRC5YFR038W ALD4P46367 519 aaKnown RBP9.04□□□□□ -0.96
IRC5YFR038W RAD9P14737 1309 aa9.04□□□□□ -0.96
IRC5YFR038W MLP1Q02455 1875 aaKnown RBP9.01□□□□□ -0.97
IRC5YFR038W TAF8Q03750 510 aa9.01□□□□□ -0.97
IRC5YFR038W FKH1P40466 484 aa8.98□□□□□ -0.97
IRC5YFR038W RTG3P38165 486 aa8.98□□□□□ -0.97
IRC5YFR038W IOC4Q04213 475 aa8.96□□□□□ -0.98
IRC5YFR038W CAB1Q04430 367 aa8.96□□□□□ -0.98
IRC5YFR038W CHZ1P40019 153 aaPredicted RBP8.95□□□□□ -0.98
IRC5YFR038W YML133CQ03099 1374 aa8.94□□□□□ -0.98
IRC5YFR038W YLL067CQ07888 1374 aa8.94□□□□□ -0.98
IRC5YFR038W YLL066CQ99208 1374 aa8.94□□□□□ -0.98
IRC5YFR038W DNF3Q12674 1656 aa8.94□□□□□ -0.98
IRC5YFR038W RPP0P05317 312 aaKnown RBP8.93□□□□□ -0.98
IRC5YFR038W YEF3P16521 1044 aaKnown RBP8.92□□□□□ -0.98
Retrieved 100 of 5,963 RNA–protein pairs in 15.4 ms