RNA–Protein interactions for RNA: YFL002C

SPB4, Transcript of Putative ATP-dependent RNA helicase, yeastyeast

Gene SPB4, Length 1,821 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPB4YFL002C AIM7Q12156 149 aa6.53□□□□□ -1.36
SPB4YFL002C RTG1P32607 177 aa6.53□□□□□ -1.36
SPB4YFL002C YOL036WQ08206 761 aa6.51□□□□□ -1.37
SPB4YFL002C GLC3P32775 704 aa6.5□□□□□ -1.37
SPB4YFL002C MAM3Q12296 706 aa6.5□□□□□ -1.37
SPB4YFL002C TRP5P00931 707 aaKnown RBP6.49□□□□□ -1.37
SPB4YFL002C NOP53Q12080 455 aaKnown RBP6.48□□□□□ -1.37
SPB4YFL002C NCR1Q12200 1170 aa6.48□□□□□ -1.37
SPB4YFL002C COQ8P27697 501 aa6.48□□□□□ -1.37
SPB4YFL002C YFR006WP43590 535 aa6.46□□□□□ -1.37
SPB4YFL002C DBP1P24784 617 aaKnown RBP6.46□□□□□ -1.38
SPB4YFL002C REF2P42073 533 aaPredicted RBP6.46□□□□□ -1.38
SPB4YFL002C NUP42P49686 430 aaKnown RBP6.46□□□□□ -1.38
SPB4YFL002C DIT2P21595 489 aa6.45□□□□□ -1.38
SPB4YFL002C GUA1P38625 525 aaKnown RBP6.45□□□□□ -1.38
SPB4YFL002C IES2P40154 320 aa6.45□□□□□ -1.38
SPB4YFL002C YMR1P47147 688 aaKnown RBP RIP-Chip data6.45□□□□□ -1.38not detected
SPB4YFL002C VPS29P38759 282 aa6.44□□□□□ -1.38
SPB4YFL002C YNL035CP53962 389 aaKnown RBP6.43□□□□□ -1.38
SPB4YFL002C MAK21Q12176 1025 aaKnown RBP6.43□□□□□ -1.38
SPB4YFL002C SEC61P32915 480 aa6.41□□□□□ -1.38
SPB4YFL002C VMA1P17255 1071 aaKnown RBP6.4□□□□□ -1.38
SPB4YFL002C TFG1P41895 735 aaPredicted RBP6.4□□□□□ -1.38
SPB4YFL002C HPC2Q01448 625 aa6.39□□□□□ -1.39
SPB4YFL002C COX6P00427 148 aa6.39□□□□□ -1.39
SPB4YFL002C ATF2P53296 535 aa6.39□□□□□ -1.39
SPB4YFL002C MIF2P35201 549 aa6.37□□□□□ -1.39
SPB4YFL002C STS1P38637 319 aa6.37□□□□□ -1.39
SPB4YFL002C EDS1P38073 919 aa6.36□□□□□ -1.39
SPB4YFL002C SAP30P38429 201 aa6.34□□□□□ -1.39
SPB4YFL002C SAM3Q08986 587 aa6.34□□□□□ -1.4
SPB4YFL002C TFB3Q03290 321 aa6.33□□□□□ -1.4
SPB4YFL002C YML020WQ03722 664 aa6.31□□□□□ -1.4
SPB4YFL002C SSA1P10591 642 aaKnown RBP6.29□□□□□ -1.4
SPB4YFL002C BCK2P33306 851 aa6.29□□□□□ -1.4
SPB4YFL002C PTC3P34221 468 aaKnown RBP6.29□□□□□ -1.4
SPB4YFL002C BRL1P38770 471 aa6.29□□□□□ -1.4
SPB4YFL002C DAN4P47179 1161 aa6.28□□□□□ -1.4
SPB4YFL002C JIP4Q03361 876 aa6.28□□□□□ -1.4
SPB4YFL002C NOP8Q08287 484 aaPredicted RBP6.28□□□□□ -1.4
SPB4YFL002C GYP5Q12344 894 aa6.28□□□□□ -1.4
SPB4YFL002C GEF1P37020 779 aa6.27□□□□□ -1.41
SPB4YFL002C SLX8P40072 274 aa6.27□□□□□ -1.41
SPB4YFL002C SUB2Q07478 446 aaKnown RBP6.27□□□□□ -1.41
SPB4YFL002C YDL129WQ07555 291 aa6.27□□□□□ -1.41
SPB4YFL002C DCW1P36091 449 aa6.26□□□□□ -1.41
SPB4YFL002C HTA1P04911 132 aaKnown RBP6.25□□□□□ -1.41
SPB4YFL002C HTA2P04912 132 aa6.25□□□□□ -1.41
SPB4YFL002C SSA2P10592 639 aaKnown RBP6.25□□□□□ -1.41
SPB4YFL002C CHL1P22516 861 aaPredicted RBP6.25□□□□□ -1.41
SPB4YFL002C PKC1P24583 1151 aa6.25□□□□□ -1.41
SPB4YFL002C YDR090CQ03193 310 aa6.25□□□□□ -1.41
SPB4YFL002C UBP14P38237 781 aaKnown RBP6.23□□□□□ -1.41
SPB4YFL002C PRE3P38624 215 aa6.22□□□□□ -1.41
SPB4YFL002C BIM1P40013 344 aa6.22□□□□□ -1.41
SPB4YFL002C VHR2P40041 505 aa6.22□□□□□ -1.41
SPB4YFL002C CSN12P47130 423 aa6.22□□□□□ -1.41
SPB4YFL002C YEL023CP39992 682 aa6.22□□□□□ -1.41
SPB4YFL002C PSE1P32337 1089 aaKnown RBP6.21□□□□□ -1.42
SPB4YFL002C GLN1P32288 370 aaKnown RBP6.2□□□□□ -1.42
SPB4YFL002C PTC4P38089 393 aa6.2□□□□□ -1.42
SPB4YFL002C YJL007CP47080 104 aa6.2□□□□□ -1.42
SPB4YFL002C AIM44Q99299 758 aa6.2□□□□□ -1.42
SPB4YFL002C ATG32P40458 529 aa6.19□□□□□ -1.42
SPB4YFL002C YLR326WQ06170 240 aaKnown RBP6.19□□□□□ -1.42
SPB4YFL002C KIC1P38692 1080 aa6.18□□□□□ -1.42
SPB4YFL002C SSA4P22202 642 aaKnown RBP6.18□□□□□ -1.42
SPB4YFL002C ATH1P48016 1211 aa6.15□□□□□ -1.43
SPB4YFL002C GUT1P32190 709 aa6.14□□□□□ -1.43
SPB4YFL002C TIF1P10081 395 aaKnown RBP6.13□□□□□ -1.43
SPB4YFL002C VRP1P37370 817 aa6.13□□□□□ -1.43
SPB4YFL002C RPL34BP40525 121 aaKnown RBP6.13□□□□□ -1.43
SPB4YFL002C TEA1P47988 759 aa6.13□□□□□ -1.43
SPB4YFL002C KTR1P27810 393 aaKnown RBP6.13□□□□□ -1.43
SPB4YFL002C RAD54P32863 898 aa6.13□□□□□ -1.43
SPB4YFL002C PCS60P38137 543 aaKnown RBP RIP-Chip data6.13□□□□□ -1.43not detected
SPB4YFL002C YGR273CP53329 174 aa6.13□□□□□ -1.43
SPB4YFL002C GRE2Q12068 342 aaKnown RBP6.13□□□□□ -1.43
SPB4YFL002C PML39Q03760 334 aa6.12□□□□□ -1.43
SPB4YFL002C YDR344CQ05510 147 aa6.12□□□□□ -1.43
SPB4YFL002C ELP4Q02884 456 aaKnown RBP6.11□□□□□ -1.43
SPB4YFL002C KEX1P09620 729 aa6.11□□□□□ -1.43
SPB4YFL002C ERG12P07277 443 aa6.1□□□□□ -1.43
SPB4YFL002C SLD2P34252 453 aa6.1□□□□□ -1.43
SPB4YFL002C YBL036CP38197 257 aa6.1□□□□□ -1.43
SPB4YFL002C ORC1P54784 914 aaPredicted RBP6.1□□□□□ -1.43
SPB4YFL002C ORC6P38826 435 aa6.09□□□□□ -1.43
SPB4YFL002C XDJ1P39102 459 aa6.09□□□□□ -1.43
SPB4YFL002C TYW1Q08960 810 aaKnown RBP6.09□□□□□ -1.43
SPB4YFL002C CPS1P27614 576 aa6.09□□□□□ -1.44
SPB4YFL002C TTI1P36097 1038 aa6.09□□□□□ -1.44
SPB4YFL002C RPL34AP87262 121 aaPredicted RBP6.08□□□□□ -1.44
SPB4YFL002C MRX12P47084 519 aa6.07□□□□□ -1.44
SPB4YFL002C BIO2P32451 375 aa6.06□□□□□ -1.44
SPB4YFL002C RTG2P32608 588 aaKnown RBP6.06□□□□□ -1.44
SPB4YFL002C SOL3P38858 249 aa6.06□□□□□ -1.44
SPB4YFL002C YPR204WQ08995 1032 aa6.06□□□□□ -1.44
SPB4YFL002C RGR1P19263 1082 aa6.06□□□□□ -1.44
SPB4YFL002C CLB5P30283 435 aa6.06□□□□□ -1.44
SPB4YFL002C NOP7P53261 605 aaKnown RBP6.06□□□□□ -1.44
Retrieved 100 of 5,963 RNA–protein pairs in 35.5 ms