RNA–Protein interactions for RNA: YER161C

SPT2, Transcript of Protein involved in negative regulation of transcription, yeastyeast

Gene SPT2, Length 1,002 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPT2YER161C PTC4P38089 393 aa7.71□□□□□ -1.18
SPT2YER161C YEL023CP39992 682 aa7.71□□□□□ -1.18
SPT2YER161C CHL1P22516 861 aaPredicted RBP7.69□□□□□ -1.18
SPT2YER161C BCK2P33306 851 aa7.66□□□□□ -1.18
SPT2YER161C PRE3P38624 215 aa7.66□□□□□ -1.18
SPT2YER161C RAM2P29703 316 aa7.64□□□□□ -1.19
SPT2YER161C GRE2Q12068 342 aaKnown RBP7.64□□□□□ -1.19
SPT2YER161C MAK11P20484 414 aaKnown RBP7.61□□□□□ -1.19
SPT2YER161C MIF2P35201 549 aa7.57□□□□□ -1.2
SPT2YER161C GUT1P32190 709 aa7.56□□□□□ -1.2
SPT2YER161C PTC3P34221 468 aaKnown RBP7.55□□□□□ -1.2
SPT2YER161C EDS1P38073 919 aa7.55□□□□□ -1.2
SPT2YER161C ATH1P48016 1211 aa7.55□□□□□ -1.2
SPT2YER161C PML39Q03760 334 aa7.55□□□□□ -1.2
SPT2YER161C YDR344CQ05510 147 aa7.54□□□□□ -1.2
SPT2YER161C NST1P53935 1240 aa7.5□□□□□ -1.21
SPT2YER161C VRP1P37370 817 aa7.49□□□□□ -1.21
SPT2YER161C ELP4Q02884 456 aaKnown RBP7.49□□□□□ -1.21
SPT2YER161C COQ8P27697 501 aa7.48□□□□□ -1.21
SPT2YER161C XDJ1P39102 459 aa7.48□□□□□ -1.21
SPT2YER161C ARH1P48360 493 aa7.46□□□□□ -1.22
SPT2YER161C SOL3P38858 249 aa7.44□□□□□ -1.22
SPT2YER161C AI4P03878 556 aa7.43□□□□□ -1.22
SPT2YER161C MID1P41821 548 aa7.43□□□□□ -1.22
SPT2YER161C MPH3P0CE00 602 aa7.42□□□□□ -1.22
SPT2YER161C NOP53Q12080 455 aaKnown RBP7.4□□□□□ -1.22
SPT2YER161C PEX29Q03370 554 aa7.39□□□□□ -1.23
SPT2YER161C SPT23P35210 1082 aa7.37□□□□□ -1.23
SPT2YER161C ILV3P39522 585 aaKnown RBP7.36□□□□□ -1.23
SPT2YER161C DPS1P04802 557 aaKnown RBP7.34□□□□□ -1.23
SPT2YER161C YGR273CP53329 174 aa7.34□□□□□ -1.23
SPT2YER161C HAP5Q02516 242 aa7.34□□□□□ -1.23
SPT2YER161C BNI4P53858 892 aa7.31□□□□□ -1.24
SPT2YER161C MPC54Q08550 464 aa7.29□□□□□ -1.24
SPT2YER161C PTC2P39966 464 aaKnown RBP7.27□□□□□ -1.25
SPT2YER161C YML082WQ04533 649 aaKnown RBP7.27□□□□□ -1.25
SPT2YER161C SLI15P38283 698 aa7.23□□□□□ -1.25
SPT2YER161C NMA111P53920 997 aa7.23□□□□□ -1.25
SPT2YER161C DPL1Q05567 589 aa7.21□□□□□ -1.26
SPT2YER161C SET1P38827 1080 aaKnown RBP7.2□□□□□ -1.26
SPT2YER161C KEX1P09620 729 aa7.16□□□□□ -1.26
SPT2YER161C SRC1Q03707 834 aa7.16□□□□□ -1.26
SPT2YER161C ISU2Q12056 156 aa7.13□□□□□ -1.27
SPT2YER161C YPR015CQ12531 247 aa7.11□□□□□ -1.27
SPT2YER161C RAM1P22007 431 aa7.1□□□□□ -1.27
SPT2YER161C VHR2P40041 505 aa7.09□□□□□ -1.27
SPT2YER161C YLR326WQ06170 240 aaKnown RBP7.09□□□□□ -1.27
SPT2YER161C CDC73Q06697 393 aa7.08□□□□□ -1.28
SPT2YER161C UBP14P38237 781 aaKnown RBP7.07□□□□□ -1.28
SPT2YER161C RAS1P01119 309 aa7.04□□□□□ -1.28
SPT2YER161C GYP1Q08484 637 aa7.03□□□□□ -1.28
SPT2YER161C RAD54P32863 898 aa7.02□□□□□ -1.29
SPT2YER161C PCS60P38137 543 aaKnown RBP RIP-Chip data7.02□□□□□ -1.29 RIP-Chip
SPT2YER161C PDR1P12383 1068 aa7.01□□□□□ -1.29
SPT2YER161C RPP1BP10622 106 aaKnown RBP7□□□□□ -1.29
SPT2YER161C AMS1P22855 1083 aa7□□□□□ -1.29
SPT2YER161C SAS4Q04003 481 aa7□□□□□ -1.29
SPT2YER161C YDR090CQ03193 310 aa6.98□□□□□ -1.29
SPT2YER161C SDH2P21801 266 aa6.95□□□□□ -1.3
SPT2YER161C IFH1P39520 1085 aa6.95□□□□□ -1.3
SPT2YER161C TRK1P12685 1235 aa6.94□□□□□ -1.3
SPT2YER161C YPR148CQ06523 435 aa6.94□□□□□ -1.3
SPT2YER161C VPS70P47161 811 aa6.93□□□□□ -1.3
SPT2YER161C RGA1P39083 1007 aa6.92□□□□□ -1.3
SPT2YER161C RGA2Q06407 1009 aa6.91□□□□□ -1.3
SPT2YER161C YEL077CQ3E7X8 1277 aa6.91□□□□□ -1.3
SPT2YER161C KIC1P38692 1080 aa6.9□□□□□ -1.3
SPT2YER161C RQC2Q12532 1038 aaKnown RBP6.9□□□□□ -1.3
SPT2YER161C GAP1P19145 602 aaPredicted RBP6.88□□□□□ -1.31
SPT2YER161C MRF1P30775 413 aaPredicted RBP6.88□□□□□ -1.31
SPT2YER161C PEX21P50091 288 aa6.88□□□□□ -1.31
SPT2YER161C YRR1Q12172 810 aa6.88□□□□□ -1.31
SPT2YER161C REF2P42073 533 aaPredicted RBP6.87□□□□□ -1.31
SPT2YER161C CSC1Q06538 782 aa6.87□□□□□ -1.31
SPT2YER161C BUD20Q08004 166 aaPredicted RBP6.87□□□□□ -1.31
SPT2YER161C TFB4Q12004 338 aa6.87□□□□□ -1.31
SPT2YER161C PRT1P06103 763 aaKnown RBP6.86□□□□□ -1.31
SPT2YER161C DMA1P38823 416 aa6.86□□□□□ -1.31
SPT2YER161C STR2P47164 639 aa6.84□□□□□ -1.31
SPT2YER161C ISM1P48526 1002 aa6.82□□□□□ -1.32
SPT2YER161C NUD1P32336 851 aa6.81□□□□□ -1.32
SPT2YER161C TUM1Q08686 304 aaKnown RBP6.81□□□□□ -1.32
SPT2YER161C ORC6P38826 435 aa6.8□□□□□ -1.32
SPT2YER161C ERG12P07277 443 aa6.79□□□□□ -1.32
SPT2YER161C NPL4P33755 580 aa6.77□□□□□ -1.33
SPT2YER161C MAK21Q12176 1025 aaKnown RBP6.77□□□□□ -1.33
SPT2YER161C COX6P00427 148 aa6.75□□□□□ -1.33
SPT2YER161C TY1A-DR4O74302 440 aa6.73□□□□□ -1.33
SPT2YER161C TY1A-HP0C2I4 478 aaKnown RBP6.73□□□□□ -1.33
SPT2YER161C TY1A-AP0CX57 440 aa6.73□□□□□ -1.33
SPT2YER161C TY1A-PR1P0CX58 440 aa6.73□□□□□ -1.33
SPT2YER161C TY1A-ORP0CX59 440 aa6.73□□□□□ -1.33
SPT2YER161C TY1A-PR2P0CX60 440 aa6.73□□□□□ -1.33
SPT2YER161C TY1A-DR5P0CX65 440 aa6.73□□□□□ -1.33
SPT2YER161C TY1A-ER2P0CX66 440 aa6.73□□□□□ -1.33
SPT2YER161C TY1A-GR3P0CX67 440 aa6.73□□□□□ -1.33
SPT2YER161C TY1A-LR1P0CX68 440 aa6.73□□□□□ -1.33
SPT2YER161C TY1A-MR2P0CX69 440 aa6.73□□□□□ -1.33
SPT2YER161C CST6P40535 587 aa6.73□□□□□ -1.33
SPT2YER161C TY1A-JR2P47099 440 aa6.73□□□□□ -1.33
Retrieved 100 of 5,963 RNA–protein pairs in 14.4 ms