RNA–Protein interactions for RNA: YER098W

UBP9, Transcript of Ubiquitin-specific protease that cleaves ubiquitin-protein fusions, yeastyeast

Gene UBP9, Length 2,265 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP9YER098W VHR2P40041 505 aa7.42□□□□□ -1.22
UBP9YER098W BIM1P40013 344 aa7.41□□□□□ -1.22
UBP9YER098W SSA2P10592 639 aaKnown RBP7.41□□□□□ -1.22
UBP9YER098W MAP2P38174 421 aaKnown RBP7.41□□□□□ -1.22
UBP9YER098W YJL007CP47080 104 aa7.41□□□□□ -1.22
UBP9YER098W YDR090CQ03193 310 aa7.41□□□□□ -1.22
UBP9YER098W AIM44Q99299 758 aa7.41□□□□□ -1.22
UBP9YER098W GLN1P32288 370 aaKnown RBP7.4□□□□□ -1.23
UBP9YER098W ATG32P40458 529 aa7.39□□□□□ -1.23
UBP9YER098W CSN12P47130 423 aa7.39□□□□□ -1.23
UBP9YER098W UBP14P38237 781 aaKnown RBP7.38□□□□□ -1.23
UBP9YER098W YOR238WQ08634 303 aa7.35□□□□□ -1.23
UBP9YER098W UBP10P53874 792 aaPredicted RBP7.35□□□□□ -1.23
UBP9YER098W SSA4P22202 642 aaKnown RBP7.34□□□□□ -1.23
UBP9YER098W ORC1P54784 914 aaPredicted RBP7.34□□□□□ -1.23
UBP9YER098W YLR326WQ06170 240 aaKnown RBP7.34□□□□□ -1.23
UBP9YER098W HAA1Q12753 694 aaKnown RBP7.34□□□□□ -1.23
UBP9YER098W SLX5P32828 619 aaKnown RBP7.33□□□□□ -1.24
UBP9YER098W ERG12P07277 443 aa7.32□□□□□ -1.24
UBP9YER098W PSE1P32337 1089 aaKnown RBP7.32□□□□□ -1.24
UBP9YER098W KIC1P38692 1080 aa7.32□□□□□ -1.24
UBP9YER098W NOP2P40991 618 aaKnown RBP7.32□□□□□ -1.24
UBP9YER098W RPL34BP40525 121 aaKnown RBP7.31□□□□□ -1.24
UBP9YER098W TIF1P10081 395 aaKnown RBP7.31□□□□□ -1.24
UBP9YER098W KTR1P27810 393 aaKnown RBP7.31□□□□□ -1.24
UBP9YER098W CPS1P27614 576 aa7.3□□□□□ -1.24
UBP9YER098W TYW1Q08960 810 aaKnown RBP7.28□□□□□ -1.24
UBP9YER098W SPA2P23201 1466 aaKnown RBP7.28□□□□□ -1.24
UBP9YER098W ATH1P48016 1211 aa7.27□□□□□ -1.24
UBP9YER098W PIB1Q06651 286 aa7.27□□□□□ -1.24
UBP9YER098W MRX12P47084 519 aa7.26□□□□□ -1.25
UBP9YER098W YPR204WQ08995 1032 aa7.26□□□□□ -1.25
UBP9YER098W RAD54P32863 898 aa7.26□□□□□ -1.25
UBP9YER098W PCS60P38137 543 aaKnown RBP RIP-Chip data7.26□□□□□ -1.25not detected
UBP9YER098W YBL036CP38197 257 aa7.26□□□□□ -1.25
UBP9YER098W TEA1P47988 759 aa7.26□□□□□ -1.25
UBP9YER098W BIO2P32451 375 aa7.25□□□□□ -1.25
UBP9YER098W RPL34AP87262 121 aaPredicted RBP7.25□□□□□ -1.25
UBP9YER098W VMA1P17255 1071 aaKnown RBP7.24□□□□□ -1.25
UBP9YER098W YGR273CP53329 174 aa7.24□□□□□ -1.25
UBP9YER098W GRE2Q12068 342 aaKnown RBP7.24□□□□□ -1.25
UBP9YER098W SGS1P35187 1447 aa7.24□□□□□ -1.25
UBP9YER098W GUT1P32190 709 aa7.24□□□□□ -1.25
UBP9YER098W KEX1P09620 729 aa7.23□□□□□ -1.25
UBP9YER098W RTG2P32608 588 aaKnown RBP7.23□□□□□ -1.25
UBP9YER098W TTI1P36097 1038 aa7.23□□□□□ -1.25
UBP9YER098W NOP7P53261 605 aaKnown RBP7.23□□□□□ -1.25
UBP9YER098W SLD2P34252 453 aa7.22□□□□□ -1.25
UBP9YER098W NOB1Q08444 459 aaKnown RBP7.22□□□□□ -1.25
UBP9YER098W ORC6P38826 435 aa7.22□□□□□ -1.25
UBP9YER098W NAP1P25293 417 aaKnown RBP7.2□□□□□ -1.26
UBP9YER098W CDC3P32457 520 aaKnown RBP7.2□□□□□ -1.26
UBP9YER098W YNL108CP53929 270 aa7.2□□□□□ -1.26
UBP9YER098W SSN2P38931 1420 aa7.2□□□□□ -1.26
UBP9YER098W NSR1P27476 414 aaKnown RBP RIP-Chip data7.18□□□□□ -1.26not detected
UBP9YER098W SOL3P38858 249 aa7.17□□□□□ -1.26
UBP9YER098W SSF1P38789 453 aaPredicted RBP7.17□□□□□ -1.26
UBP9YER098W SNU71P53207 620 aaKnown RBP7.17□□□□□ -1.26
UBP9YER098W RGR1P19263 1082 aa7.16□□□□□ -1.26
UBP9YER098W YML083CQ04526 418 aa7.16□□□□□ -1.26
UBP9YER098W NIS1P53939 407 aa7.16□□□□□ -1.26
UBP9YER098W IOC4Q04213 475 aa7.16□□□□□ -1.26
UBP9YER098W RAD59Q12223 238 aa7.16□□□□□ -1.26
UBP9YER098W PKH3Q03306 898 aaPredicted RBP7.15□□□□□ -1.26
UBP9YER098W YAP5P40574 245 aa7.15□□□□□ -1.27
UBP9YER098W FPK1P53739 893 aa7.14□□□□□ -1.27
UBP9YER098W HST2P53686 357 aa7.13□□□□□ -1.27
UBP9YER098W SEN54Q02825 467 aaPredicted RBP7.13□□□□□ -1.27
UBP9YER098W YMR196WQ04336 1088 aa7.13□□□□□ -1.27
UBP9YER098W ESS1P22696 170 aa7.13□□□□□ -1.27
UBP9YER098W PUP1P25043 261 aa7.13□□□□□ -1.27
UBP9YER098W CLB5P30283 435 aa7.13□□□□□ -1.27
UBP9YER098W SCJ1P25303 377 aa7.12□□□□□ -1.27
UBP9YER098W CSE4P36012 229 aa7.12□□□□□ -1.27
UBP9YER098W MVP1P40959 511 aaKnown RBP7.12□□□□□ -1.27
UBP9YER098W HAT1Q12341 374 aa7.12□□□□□ -1.27
UBP9YER098W RRN6P32786 894 aa7.12□□□□□ -1.27
UBP9YER098W MMP1Q12372 583 aa7.12□□□□□ -1.27
UBP9YER098W SUP45P12385 437 aaKnown RBP7.11□□□□□ -1.27
UBP9YER098W ENO1P00924 437 aaKnown RBP7.1□□□□□ -1.27
UBP9YER098W PAM1P37304 830 aaKnown RBP7.1□□□□□ -1.27
UBP9YER098W SAM3Q08986 587 aa7.1□□□□□ -1.27
UBP9YER098W GYP5Q12344 894 aa7.1□□□□□ -1.27
UBP9YER098W YJU3P28321 313 aa7.1□□□□□ -1.27
UBP9YER098W MET10P39692 1035 aa7.1□□□□□ -1.27
UBP9YER098W ENO2P00925 437 aaKnown RBP7.09□□□□□ -1.27
UBP9YER098W HEM3P28789 327 aa7.09□□□□□ -1.27
UBP9YER098W YGL015CP33199 130 aa7.09□□□□□ -1.27
UBP9YER098W YDJ1P25491 409 aaKnown RBP7.08□□□□□ -1.28
UBP9YER098W NST1P53935 1240 aa7.08□□□□□ -1.28
UBP9YER098W ARG8P18544 423 aa7.07□□□□□ -1.28
UBP9YER098W SIS2P36024 562 aa7.06□□□□□ -1.28
UBP9YER098W MRX10Q05648 414 aa7.06□□□□□ -1.28
UBP9YER098W SKI3P17883 1432 aaKnown RBP7.06□□□□□ -1.28
UBP9YER098W GAP1P19145 602 aaPredicted RBP7.05□□□□□ -1.28
UBP9YER098W ILV3P39522 585 aaKnown RBP7.05□□□□□ -1.28
UBP9YER098W YPR109WQ06104 294 aa7.05□□□□□ -1.28
UBP9YER098W TGL4P36165 910 aa7.04□□□□□ -1.28
UBP9YER098W RIM21P48565 533 aa7.04□□□□□ -1.28
UBP9YER098W DCW1P36091 449 aa7.03□□□□□ -1.28
Retrieved 100 of 5,963 RNA–protein pairs in 8.2 ms