RNA–Protein interactions for RNA: YEL005C

VAB2, Transcript of Subunit of the BLOC-1 complex involved in endosomal maturation, yeastyeast

Gene VAB2, Length 849 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VAB2YEL005C ABP1P15891 592 aaKnown RBP8.88□□□□□ -0.99
VAB2YEL005C PTC4P38089 393 aa8.87□□□□□ -0.99
VAB2YEL005C YEL023CP39992 682 aa8.87□□□□□ -0.99
VAB2YEL005C RCR1P38212 213 aa8.84□□□□□ -0.99
VAB2YEL005C RGA2Q06407 1009 aa8.84□□□□□ -0.99
VAB2YEL005C ARP8Q12386 881 aaKnown RBP RIP-Chip data8.83□□□□□ -1not detected
VAB2YEL005C DPS1P04802 557 aaKnown RBP8.81□□□□□ -1
VAB2YEL005C SSP1P38871 571 aa8.79□□□□□ -1
VAB2YEL005C ELP4Q02884 456 aaKnown RBP8.75□□□□□ -1.01
VAB2YEL005C PML39Q03760 334 aa8.74□□□□□ -1.01
VAB2YEL005C MGA2P40578 1113 aa8.72□□□□□ -1.01
VAB2YEL005C TFA1P36100 482 aa8.66□□□□□ -1.02
VAB2YEL005C SRC1Q03707 834 aa8.66□□□□□ -1.02
VAB2YEL005C RGA1P39083 1007 aa8.62□□□□□ -1.03
VAB2YEL005C ARH1P48360 493 aa8.61□□□□□ -1.03
VAB2YEL005C GRE2Q12068 342 aaKnown RBP8.59□□□□□ -1.03
VAB2YEL005C MID1P41821 548 aa8.58□□□□□ -1.04
VAB2YEL005C SPT23P35210 1082 aa8.51□□□□□ -1.05
VAB2YEL005C NST1P53935 1240 aa8.48□□□□□ -1.05
VAB2YEL005C ATH1P48016 1211 aa8.46□□□□□ -1.06
VAB2YEL005C PEX29Q03370 554 aa8.45□□□□□ -1.06
VAB2YEL005C GUT1P32190 709 aa8.44□□□□□ -1.06
VAB2YEL005C MIF2P35201 549 aa8.43□□□□□ -1.06
VAB2YEL005C HAP5Q02516 242 aa8.42□□□□□ -1.06
VAB2YEL005C PTC3P34221 468 aaKnown RBP8.41□□□□□ -1.06
VAB2YEL005C EDS1P38073 919 aa8.41□□□□□ -1.06
VAB2YEL005C SOL3P38858 249 aa8.39□□□□□ -1.07
VAB2YEL005C BNI4P53858 892 aa8.37□□□□□ -1.07
VAB2YEL005C YML082WQ04533 649 aaKnown RBP8.36□□□□□ -1.07
VAB2YEL005C RAS1P01119 309 aa8.35□□□□□ -1.07
VAB2YEL005C ILV3P39522 585 aaKnown RBP8.35□□□□□ -1.07
VAB2YEL005C PTC2P39966 464 aaKnown RBP8.35□□□□□ -1.07
VAB2YEL005C MPH3P0CE00 602 aa8.34□□□□□ -1.07
VAB2YEL005C AI4P03878 556 aa8.33□□□□□ -1.08
VAB2YEL005C MAK11P20484 414 aaKnown RBP8.3□□□□□ -1.08
VAB2YEL005C MPC54Q08550 464 aa8.29□□□□□ -1.08
VAB2YEL005C RAM2P29703 316 aa8.24□□□□□ -1.09
VAB2YEL005C NMA111P53920 997 aa8.22□□□□□ -1.09
VAB2YEL005C COQ8P27697 501 aa8.21□□□□□ -1.1
VAB2YEL005C YPR015CQ12531 247 aa8.21□□□□□ -1.1
VAB2YEL005C TRK1P12685 1235 aa8.17□□□□□ -1.1
VAB2YEL005C YGR273CP53329 174 aa8.14□□□□□ -1.11
VAB2YEL005C AMS1P22855 1083 aa8.12□□□□□ -1.11
VAB2YEL005C SLI15P38283 698 aa8.12□□□□□ -1.11
VAB2YEL005C RAM1P22007 431 aa8.11□□□□□ -1.11
VAB2YEL005C DPL1Q05567 589 aa8.11□□□□□ -1.11
VAB2YEL005C YPL062WQ02781 134 aa8.06□□□□□ -1.12
VAB2YEL005C GYP1Q08484 637 aa8.05□□□□□ -1.12
VAB2YEL005C SDH2P21801 266 aa8.04□□□□□ -1.12
VAB2YEL005C ISU2Q12056 156 aa7.99□□□□□ -1.13
VAB2YEL005C PDR1P12383 1068 aa7.95□□□□□ -1.14
VAB2YEL005C CDC73Q06697 393 aa7.94□□□□□ -1.14
VAB2YEL005C NOP53Q12080 455 aaKnown RBP7.92□□□□□ -1.14
VAB2YEL005C SAS4Q04003 481 aa7.91□□□□□ -1.14
VAB2YEL005C KEX1P09620 729 aa7.9□□□□□ -1.14
VAB2YEL005C YEL077CQ3E7X8 1277 aa7.89□□□□□ -1.15
VAB2YEL005C GAR1P28007 205 aaKnown RBP7.83□□□□□ -1.16
VAB2YEL005C BRE2P43132 505 aa7.81□□□□□ -1.16
VAB2YEL005C AIR1P40507 360 aaKnown RBP7.8□□□□□ -1.16
VAB2YEL005C GBP2P25555 427 aaKnown RBP RIP-Chip data7.77□□□□□ -1.17not detected
VAB2YEL005C MRF1P30775 413 aaPredicted RBP7.77□□□□□ -1.17
VAB2YEL005C CLA4P48562 842 aa7.75□□□□□ -1.17
VAB2YEL005C BUD20Q08004 166 aaPredicted RBP7.75□□□□□ -1.17
VAB2YEL005C YLR326WQ06170 240 aaKnown RBP7.74□□□□□ -1.17
VAB2YEL005C UBP14P38237 781 aaKnown RBP7.71□□□□□ -1.18
VAB2YEL005C PRT1P06103 763 aaKnown RBP7.7□□□□□ -1.18
VAB2YEL005C PCS60P38137 543 aaKnown RBP RIP-Chip data7.7□□□□□ -1.18 RIP-Chip
VAB2YEL005C CST6P40535 587 aa7.7□□□□□ -1.18
VAB2YEL005C GCR2Q01722 534 aa7.7□□□□□ -1.18
VAB2YEL005C VHR2P40041 505 aa7.69□□□□□ -1.18
VAB2YEL005C ERG12P07277 443 aa7.67□□□□□ -1.18
VAB2YEL005C STR2P47164 639 aa7.67□□□□□ -1.18
VAB2YEL005C RAD54P32863 898 aa7.63□□□□□ -1.19
VAB2YEL005C ISM1P48526 1002 aa7.63□□□□□ -1.19
VAB2YEL005C YRR1Q12172 810 aa7.63□□□□□ -1.19
VAB2YEL005C RQC2Q12532 1038 aaKnown RBP7.62□□□□□ -1.19
VAB2YEL005C RPP1BP10622 106 aaKnown RBP7.6□□□□□ -1.19
VAB2YEL005C MET22P32179 357 aa7.6□□□□□ -1.19
VAB2YEL005C LAM6Q08001 693 aa7.6□□□□□ -1.19
VAB2YEL005C NUD1P32336 851 aa7.55□□□□□ -1.2
VAB2YEL005C FRK1Q03002 865 aaPredicted RBP7.55□□□□□ -1.2
VAB2YEL005C CDC4P07834 779 aa7.54□□□□□ -1.2
VAB2YEL005C ENV9Q08651 330 aa7.54□□□□□ -1.2
VAB2YEL005C PEX21P50091 288 aa7.53□□□□□ -1.2
VAB2YEL005C TY1A-DR4O74302 440 aa7.51□□□□□ -1.21
VAB2YEL005C TY1A-HP0C2I4 478 aaKnown RBP7.51□□□□□ -1.21
VAB2YEL005C TY1A-AP0CX57 440 aa7.51□□□□□ -1.21
VAB2YEL005C TY1A-PR1P0CX58 440 aa7.51□□□□□ -1.21
VAB2YEL005C TY1A-ORP0CX59 440 aa7.51□□□□□ -1.21
VAB2YEL005C TY1A-PR2P0CX60 440 aa7.51□□□□□ -1.21
VAB2YEL005C TY1A-DR5P0CX65 440 aa7.51□□□□□ -1.21
VAB2YEL005C TY1A-ER2P0CX66 440 aa7.51□□□□□ -1.21
VAB2YEL005C TY1A-GR3P0CX67 440 aa7.51□□□□□ -1.21
VAB2YEL005C TY1A-LR1P0CX68 440 aa7.51□□□□□ -1.21
VAB2YEL005C TY1A-MR2P0CX69 440 aa7.51□□□□□ -1.21
VAB2YEL005C TY1A-JR2P47099 440 aa7.51□□□□□ -1.21
VAB2YEL005C TY1A-DR1Q03856 440 aa7.51□□□□□ -1.21
VAB2YEL005C TY1A-ML1Q04706 440 aaKnown RBP7.51□□□□□ -1.21
VAB2YEL005C TY1A-BRQ12217 440 aa7.51□□□□□ -1.21
VAB2YEL005C TY1A-NL2Q12470 440 aa7.51□□□□□ -1.21
Retrieved 100 of 5,963 RNA–protein pairs in 11.4 ms