RNA–Protein interactions for RNA: YEL003W

GIM4, Transcript of Subunit of the heterohexameric cochaperone prefoldin complex, yeastyeast

Gene GIM4, Length 336 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
GIM4YEL003W PTC4P38089 393 aa9.5□□□□□ -0.89
GIM4YEL003W YEL023CP39992 682 aa9.49□□□□□ -0.89
GIM4YEL003W CHL1P22516 861 aaPredicted RBP9.45□□□□□ -0.9
GIM4YEL003W BCK2P33306 851 aa9.42□□□□□ -0.9
GIM4YEL003W PRE3P38624 215 aa9.42□□□□□ -0.9
GIM4YEL003W GRE2Q12068 342 aaKnown RBP9.42□□□□□ -0.9
GIM4YEL003W MAK11P20484 414 aaKnown RBP9.4□□□□□ -0.9
GIM4YEL003W RAM2P29703 316 aa9.36□□□□□ -0.91
GIM4YEL003W MIF2P35201 549 aa9.35□□□□□ -0.91
GIM4YEL003W EDS1P38073 919 aa9.34□□□□□ -0.91
GIM4YEL003W PTC3P34221 468 aaKnown RBP9.33□□□□□ -0.92
GIM4YEL003W GUT1P32190 709 aa9.32□□□□□ -0.92
GIM4YEL003W ATH1P48016 1211 aa9.32□□□□□ -0.92
GIM4YEL003W PML39Q03760 334 aa9.31□□□□□ -0.92
GIM4YEL003W NST1P53935 1240 aa9.27□□□□□ -0.93
GIM4YEL003W YDR344CQ05510 147 aa9.27□□□□□ -0.93
GIM4YEL003W COQ8P27697 501 aa9.24□□□□□ -0.93
GIM4YEL003W ELP4Q02884 456 aaKnown RBP9.22□□□□□ -0.93
GIM4YEL003W VRP1P37370 817 aa9.2□□□□□ -0.94
GIM4YEL003W SOL3P38858 249 aa9.19□□□□□ -0.94
GIM4YEL003W XDJ1P39102 459 aa9.19□□□□□ -0.94
GIM4YEL003W ARH1P48360 493 aa9.19□□□□□ -0.94
GIM4YEL003W AI4P03878 556 aa9.16□□□□□ -0.94
GIM4YEL003W MPH3P0CE00 602 aa9.16□□□□□ -0.94
GIM4YEL003W MID1P41821 548 aa9.16□□□□□ -0.94
GIM4YEL003W NOP53Q12080 455 aaKnown RBP9.13□□□□□ -0.95
GIM4YEL003W ILV3P39522 585 aaKnown RBP9.1□□□□□ -0.95
GIM4YEL003W PEX29Q03370 554 aa9.09□□□□□ -0.95
GIM4YEL003W SPT23P35210 1082 aa9.08□□□□□ -0.96
GIM4YEL003W YGR273CP53329 174 aa9.06□□□□□ -0.96
GIM4YEL003W HAP5Q02516 242 aa9.04□□□□□ -0.96
GIM4YEL003W DPS1P04802 557 aaKnown RBP9.01□□□□□ -0.97
GIM4YEL003W BNI4P53858 892 aa9.01□□□□□ -0.97
GIM4YEL003W MPC54Q08550 464 aa8.98□□□□□ -0.97
GIM4YEL003W YML082WQ04533 649 aaKnown RBP8.96□□□□□ -0.98
GIM4YEL003W PTC2P39966 464 aaKnown RBP8.94□□□□□ -0.98
GIM4YEL003W SLI15P38283 698 aa8.93□□□□□ -0.98
GIM4YEL003W NMA111P53920 997 aa8.91□□□□□ -0.98
GIM4YEL003W DPL1Q05567 589 aa8.89□□□□□ -0.99
GIM4YEL003W KEX1P09620 729 aa8.85□□□□□ -0.99
GIM4YEL003W SRC1Q03707 834 aa8.82□□□□□ -1
GIM4YEL003W RGA2Q06407 1009 aa8.82□□□□□ -1
GIM4YEL003W SET1P38827 1080 aaKnown RBP8.79□□□□□ -1
GIM4YEL003W ISU2Q12056 156 aa8.79□□□□□ -1
GIM4YEL003W YPR015CQ12531 247 aa8.78□□□□□ -1
GIM4YEL003W RAM1P22007 431 aa8.77□□□□□ -1.01
GIM4YEL003W YLR326WQ06170 240 aaKnown RBP8.76□□□□□ -1.01
GIM4YEL003W CDC73Q06697 393 aa8.75□□□□□ -1.01
GIM4YEL003W UBP14P38237 781 aaKnown RBP8.74□□□□□ -1.01
GIM4YEL003W VHR2P40041 505 aa8.7□□□□□ -1.02
GIM4YEL003W PCS60P38137 543 aaKnown RBP RIP-Chip data8.69□□□□□ -1.02not detected
GIM4YEL003W RAS1P01119 309 aa8.68□□□□□ -1.02
GIM4YEL003W RGA1P39083 1007 aa8.67□□□□□ -1.02
GIM4YEL003W RAD54P32863 898 aa8.66□□□□□ -1.02
GIM4YEL003W PDR1P12383 1068 aa8.65□□□□□ -1.02
GIM4YEL003W GYP1Q08484 637 aa8.65□□□□□ -1.02
GIM4YEL003W RPP1BP10622 106 aaKnown RBP8.63□□□□□ -1.03
GIM4YEL003W AMS1P22855 1083 aa8.62□□□□□ -1.03
GIM4YEL003W SAS4Q04003 481 aa8.61□□□□□ -1.03
GIM4YEL003W SDH2P21801 266 aa8.58□□□□□ -1.04
GIM4YEL003W IFH1P39520 1085 aa8.58□□□□□ -1.04
GIM4YEL003W YDR090CQ03193 310 aa8.58□□□□□ -1.04
GIM4YEL003W TRK1P12685 1235 aa8.53□□□□□ -1.04
GIM4YEL003W GAP1P19145 602 aaPredicted RBP8.51□□□□□ -1.05
GIM4YEL003W KIC1P38692 1080 aa8.51□□□□□ -1.05
GIM4YEL003W YPR148CQ06523 435 aa8.5□□□□□ -1.05
GIM4YEL003W YEL077CQ3E7X8 1277 aa8.5□□□□□ -1.05
GIM4YEL003W BUD20Q08004 166 aaPredicted RBP8.49□□□□□ -1.05
GIM4YEL003W YRR1Q12172 810 aa8.49□□□□□ -1.05
GIM4YEL003W PEX21P50091 288 aa8.48□□□□□ -1.05
GIM4YEL003W CSC1Q06538 782 aa8.48□□□□□ -1.05
GIM4YEL003W MRF1P30775 413 aaPredicted RBP8.47□□□□□ -1.05
GIM4YEL003W REF2P42073 533 aaPredicted RBP8.47□□□□□ -1.05
GIM4YEL003W TFB4Q12004 338 aa8.47□□□□□ -1.05
GIM4YEL003W PRT1P06103 763 aaKnown RBP8.46□□□□□ -1.06
GIM4YEL003W STR2P47164 639 aa8.45□□□□□ -1.06
GIM4YEL003W ORC6P38826 435 aa8.42□□□□□ -1.06
GIM4YEL003W ISM1P48526 1002 aa8.42□□□□□ -1.06
GIM4YEL003W NUD1P32336 851 aa8.41□□□□□ -1.06
GIM4YEL003W TUM1Q08686 304 aaKnown RBP8.41□□□□□ -1.06
GIM4YEL003W ERG12P07277 443 aa8.36□□□□□ -1.07
GIM4YEL003W MAK21Q12176 1025 aaKnown RBP8.35□□□□□ -1.07
GIM4YEL003W COX6P00427 148 aa8.34□□□□□ -1.07
GIM4YEL003W NPL4P33755 580 aa8.34□□□□□ -1.07
GIM4YEL003W VPS70P47161 811 aa8.33□□□□□ -1.08
GIM4YEL003W TY1A-DR4O74302 440 aa8.32□□□□□ -1.08
GIM4YEL003W TY1A-HP0C2I4 478 aaKnown RBP8.32□□□□□ -1.08
GIM4YEL003W TY1A-AP0CX57 440 aa8.32□□□□□ -1.08
GIM4YEL003W TY1A-PR1P0CX58 440 aa8.32□□□□□ -1.08
GIM4YEL003W TY1A-ORP0CX59 440 aa8.32□□□□□ -1.08
GIM4YEL003W TY1A-PR2P0CX60 440 aa8.32□□□□□ -1.08
GIM4YEL003W TY1A-DR5P0CX65 440 aa8.32□□□□□ -1.08
GIM4YEL003W TY1A-ER2P0CX66 440 aa8.32□□□□□ -1.08
GIM4YEL003W TY1A-GR3P0CX67 440 aa8.32□□□□□ -1.08
GIM4YEL003W TY1A-LR1P0CX68 440 aa8.32□□□□□ -1.08
GIM4YEL003W TY1A-MR2P0CX69 440 aa8.32□□□□□ -1.08
GIM4YEL003W TY1A-JR2P47099 440 aa8.32□□□□□ -1.08
GIM4YEL003W TY1A-DR1Q03856 440 aa8.32□□□□□ -1.08
GIM4YEL003W TY1A-ML1Q04706 440 aaKnown RBP8.32□□□□□ -1.08
GIM4YEL003W TY1A-BRQ12217 440 aa8.32□□□□□ -1.08
Retrieved 100 of 5,963 RNA–protein pairs in 12.8 ms