RNA–Protein interactions for RNA: YDR543C

YDR543C, Transcript of Dubious open reading frame, yeastyeast

Gene YDR543C, Length 300 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YDR543CYDR543C DUS1P53759 423 aaKnown RBP-1.2□□□□□ -2.6
YDR543CYDR543C PIB1Q06651 286 aa-1.2□□□□□ -2.6
YDR543CYDR543C VRP1P37370 817 aa-1.21□□□□□ -2.6
YDR543CYDR543C RSC30P38781 883 aa-1.21□□□□□ -2.6
YDR543CYDR543C VPS71Q03433 280 aa-1.21□□□□□ -2.6
YDR543CYDR543C CRR1Q05790 422 aa-1.21□□□□□ -2.6
YDR543CYDR543C RIB2Q12362 591 aaKnown RBP-1.21□□□□□ -2.6
YDR543CYDR543C PET127P32606 800 aa-1.22□□□□□ -2.6
YDR543CYDR543C YBL086CP38177 466 aa-1.23□□□□□ -2.61
YDR543CYDR543C HAL5P38970 855 aaKnown RBP-1.23□□□□□ -2.61
YDR543CYDR543C PTK2P47116 818 aaKnown RBP-1.23□□□□□ -2.61
YDR543CYDR543C RAT1Q02792 1006 aaKnown RBP-1.23□□□□□ -2.61
YDR543CYDR543C CCP1P00431 361 aa-1.24□□□□□ -2.61
YDR543CYDR543C CAF20P12962 161 aaKnown RBP-1.24□□□□□ -2.61
YDR543CYDR543C GAT1P43574 510 aa-1.24□□□□□ -2.61
YDR543CYDR543C LAM6Q08001 693 aa-1.24□□□□□ -2.61
YDR543CYDR543C PIN2Q12057 282 aa-1.24□□□□□ -2.61
YDR543CYDR543C YJL206CP39529 758 aa-1.25□□□□□ -2.61
YDR543CYDR543C MUB1Q03162 620 aa-1.25□□□□□ -2.61
YDR543CYDR543C YCL049CP25577 312 aa-1.26□□□□□ -2.61
YDR543CYDR543C RGT1P32862 1170 aa-1.26□□□□□ -2.61
YDR543CYDR543C SAP30P38429 201 aa-1.26□□□□□ -2.61
YDR543CYDR543C POX1P13711 748 aa-1.27□□□□□ -2.61
YDR543CYDR543C KIP2P28743 706 aa-1.27□□□□□ -2.61
YDR543CYDR543C TOS1P38288 455 aa-1.27□□□□□ -2.61
YDR543CYDR543C HUA1P40325 198 aa-1.27□□□□□ -2.61
YDR543CYDR543C NST1P53935 1240 aa-1.27□□□□□ -2.61
YDR543CYDR543C TLG2Q08144 397 aa-1.27□□□□□ -2.61
YDR543CYDR543C SSD1P24276 1250 aaKnown RBP RIP-Chip data-1.28□□□□□ -2.61not detected
YDR543CYDR543C DBP1P24784 617 aaKnown RBP-1.28□□□□□ -2.61
YDR543CYDR543C LRG1P35688 1017 aa-1.28□□□□□ -2.61
YDR543CYDR543C UBP5P39944 805 aa-1.28□□□□□ -2.61
YDR543CYDR543C DOT6P40059 670 aaKnown RBP-1.28□□□□□ -2.61
YDR543CYDR543C EAF6P47128 113 aa-1.28□□□□□ -2.61
YDR543CYDR543C TOS2P50078 622 aa-1.28□□□□□ -2.61
YDR543CYDR543C UBP3Q01477 912 aaKnown RBP RIP-Chip data-1.28□□□□□ -2.61not detected
YDR543CYDR543C YMR265CQ03508 461 aaKnown RBP-1.28□□□□□ -2.61
YDR543CYDR543C RGC1Q06108 1083 aaKnown RBP-1.28□□□□□ -2.61
YDR543CYDR543C CDC9P04819 755 aa-1.29□□□□□ -2.62
YDR543CYDR543C CDC11P32458 415 aa-1.29□□□□□ -2.62
YDR543CYDR543C RFS1P38234 210 aaKnown RBP-1.29□□□□□ -2.62
YDR543CYDR543C TPS3P38426 1054 aaKnown RBP-1.29□□□□□ -2.62
YDR543CYDR543C STB3Q12427 513 aa-1.29□□□□□ -2.62
YDR543CYDR543C MAP2P38174 421 aaKnown RBP-1.3□□□□□ -2.62
YDR543CYDR543C GTS1P40956 396 aa-1.3□□□□□ -2.62
YDR543CYDR543C MPS1P54199 764 aa-1.3□□□□□ -2.62
YDR543CYDR543C YPR196WQ06595 470 aa-1.3□□□□□ -2.62
YDR543CYDR543C WSC3Q12215 556 aa-1.3□□□□□ -2.62
YDR543CYDR543C BEM2P39960 2167 aaKnown RBP-1.3□□□□□ -2.62
YDR543CYDR543C GLT1Q12680 2145 aaKnown RBP-1.31□□□□□ -2.62
YDR543CYDR543C NAM2P11325 894 aa-1.32□□□□□ -2.62
YDR543CYDR543C YSC84P32793 468 aa-1.32□□□□□ -2.62
YDR543CYDR543C NIS1P53939 407 aa-1.32□□□□□ -2.62
YDR543CYDR543C DIG2Q03373 323 aaKnown RBP-1.32□□□□□ -2.62
YDR543CYDR543C GUD1Q07729 489 aa-1.32□□□□□ -2.62
YDR543CYDR543C NRP1P32770 719 aaKnown RBP RIP-Chip data-1.33□□□□□ -2.62not detected
YDR543CYDR543C MDJ1P35191 511 aa-1.33□□□□□ -2.62
YDR543CYDR543C MIF2P35201 549 aa-1.33□□□□□ -2.62
YDR543CYDR543C NRD1P53617 575 aaKnown RBP RIP-Chip data-1.33□□□□□ -2.62not detected
YDR543CYDR543C INN1P53901 409 aa-1.33□□□□□ -2.62
YDR543CYDR543C AFR1P33304 620 aa-1.34□□□□□ -2.62
YDR543CYDR543C TRS20P38334 175 aa-1.34□□□□□ -2.62
YDR543CYDR543C DED81P38707 554 aaKnown RBP-1.34□□□□□ -2.62
YDR543CYDR543C RGA1P39083 1007 aa-1.34□□□□□ -2.62
YDR543CYDR543C AZF1P41696 914 aa-1.34□□□□□ -2.62
YDR543CYDR543C STE20Q03497 939 aaKnown RBP-1.34□□□□□ -2.62
YDR543CYDR543C YDL176WQ12027 708 aa-1.34□□□□□ -2.62
YDR543CYDR543C PPZ1P26570 692 aa-1.35□□□□□ -2.63
YDR543CYDR543C FPK1P53739 893 aa-1.35□□□□□ -2.63
YDR543CYDR543C SWI5P08153 709 aa-1.36□□□□□ -2.63
YDR543CYDR543C SEN2P16658 377 aa-1.36□□□□□ -2.63
YDR543CYDR543C SNF5P18480 905 aa-1.36□□□□□ -2.63
YDR543CYDR543C YPT32P51996 222 aaKnown RBP-1.36□□□□□ -2.63
YDR543CYDR543C GIS2P53849 153 aaKnown RBP RIP-Chip data-1.36□□□□□ -2.63not detected
YDR543CYDR543C YMR210WQ03649 449 aa-1.36□□□□□ -2.63
YDR543CYDR543C MAC1P35192 417 aa-1.37□□□□□ -2.63
YDR543CYDR543C SPT21P35209 758 aa-1.37□□□□□ -2.63
YDR543CYDR543C RTS1P38903 757 aa-1.37□□□□□ -2.63
YDR543CYDR543C AXL1P40851 1208 aa-1.37□□□□□ -2.63
YDR543CYDR543C VAM6Q07468 1049 aa-1.37□□□□□ -2.63
YDR543CYDR543C RPO21P04050 1733 aaKnown RBP-1.37□□□□□ -2.63
YDR543CYDR543C POL2P21951 2222 aaKnown RBP-1.38□□□□□ -2.63
YDR543CYDR543C YKL097CP34245 136 aa-1.38□□□□□ -2.63
YDR543CYDR543C YKL222CP35995 705 aa-1.38□□□□□ -2.63
YDR543CYDR543C NMD3P38861 518 aaKnown RBP-1.38□□□□□ -2.63
YDR543CYDR543C MBP1P39678 833 aa-1.38□□□□□ -2.63
YDR543CYDR543C VPS70P47161 811 aa-1.38□□□□□ -2.63
YDR543CYDR543C FAA4P47912 694 aaKnown RBP-1.38□□□□□ -2.63
YDR543CYDR543C YNL108CP53929 270 aa-1.38□□□□□ -2.63
YDR543CYDR543C PKH3Q03306 898 aaPredicted RBP-1.38□□□□□ -2.63
YDR543CYDR543C CST9Q06032 482 aa-1.38□□□□□ -2.63
YDR543CYDR543C LSB5P25369 354 aa-1.39□□□□□ -2.63
YDR543CYDR543C GBP2P25555 427 aaKnown RBP RIP-Chip data-1.39□□□□□ -2.63not detected
YDR543CYDR543C BOI1P38041 980 aaKnown RBP-1.39□□□□□ -2.63
YDR543CYDR543C YFR006WP43590 535 aa-1.39□□□□□ -2.63
YDR543CYDR543C OCA1P50946 238 aaPredicted RBP-1.39□□□□□ -2.63
YDR543CYDR543C SSL1Q04673 461 aaPredicted RBP-1.39□□□□□ -2.63
YDR543CYDR543C ASM4Q05166 528 aa-1.39□□□□□ -2.63
YDR543CYDR543C YDR215CQ12240 137 aa-1.39□□□□□ -2.63
YDR543CYDR543C SGV1P23293 657 aaKnown RBP-1.4□□□□□ -2.63
Retrieved 100 of 5,963 RNA–protein pairs in 40.9 ms