RNA–Protein interactions for RNA: YDR484W

VPS52, Transcript of Component of the GARP (Golgi-associated retrograde protein) complex, yeastyeast

Gene VPS52, Length 1,926 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS52YDR484W TFA1P36100 482 aa6.44□□□□□ -1.38
VPS52YDR484W VRP1P37370 817 aa6.44□□□□□ -1.38
VPS52YDR484W PTC4P38089 393 aa6.44□□□□□ -1.38
VPS52YDR484W YEL023CP39992 682 aa6.4□□□□□ -1.39
VPS52YDR484W SSP1P38871 571 aa6.39□□□□□ -1.39
VPS52YDR484W CST9Q06032 482 aa6.39□□□□□ -1.39
VPS52YDR484W ELP4Q02884 456 aaKnown RBP6.37□□□□□ -1.39
VPS52YDR484W DPS1P04802 557 aaKnown RBP6.36□□□□□ -1.39
VPS52YDR484W MGA2P40578 1113 aa6.33□□□□□ -1.4
VPS52YDR484W YDR344CQ05510 147 aa6.32□□□□□ -1.4
VPS52YDR484W RCR1P38212 213 aa6.31□□□□□ -1.4
VPS52YDR484W PML39Q03760 334 aa6.31□□□□□ -1.4
VPS52YDR484W ARH1P48360 493 aa6.23□□□□□ -1.41
VPS52YDR484W GRE2Q12068 342 aaKnown RBP6.23□□□□□ -1.41
VPS52YDR484W SPT23P35210 1082 aa6.19□□□□□ -1.42
VPS52YDR484W RGA1P39083 1007 aa6.19□□□□□ -1.42
VPS52YDR484W MID1P41821 548 aa6.18□□□□□ -1.42
VPS52YDR484W ATH1P48016 1211 aa6.16□□□□□ -1.42
VPS52YDR484W PEX29Q03370 554 aa6.15□□□□□ -1.42
VPS52YDR484W SRC1Q03707 834 aa6.15□□□□□ -1.42
VPS52YDR484W GUT1P32190 709 aa6.13□□□□□ -1.43
VPS52YDR484W MIF2P35201 549 aa6.13□□□□□ -1.43
VPS52YDR484W HAP5Q02516 242 aa6.09□□□□□ -1.43
VPS52YDR484W PTC3P34221 468 aaKnown RBP6.08□□□□□ -1.44
VPS52YDR484W PTC2P39966 464 aaKnown RBP6.07□□□□□ -1.44
VPS52YDR484W YML082WQ04533 649 aaKnown RBP6.07□□□□□ -1.44
VPS52YDR484W NST1P53935 1240 aa6.06□□□□□ -1.44
VPS52YDR484W BNI4P53858 892 aa6.05□□□□□ -1.44
VPS52YDR484W MPH3P0CE00 602 aa6.05□□□□□ -1.44
VPS52YDR484W EDS1P38073 919 aa6.04□□□□□ -1.44
VPS52YDR484W SOL3P38858 249 aa6.03□□□□□ -1.44
VPS52YDR484W AI4P03878 556 aa6.02□□□□□ -1.45
VPS52YDR484W RAS1P01119 309 aa6.01□□□□□ -1.45
VPS52YDR484W MAK11P20484 414 aaKnown RBP6.01□□□□□ -1.45
VPS52YDR484W MPC54Q08550 464 aa5.97□□□□□ -1.45
VPS52YDR484W ILV3P39522 585 aaKnown RBP5.96□□□□□ -1.46
VPS52YDR484W NMA111P53920 997 aa5.96□□□□□ -1.46
VPS52YDR484W COQ8P27697 501 aa5.93□□□□□ -1.46
VPS52YDR484W RAM2P29703 316 aa5.93□□□□□ -1.46
VPS52YDR484W TRK1P12685 1235 aa5.91□□□□□ -1.46
VPS52YDR484W YGR273CP53329 174 aa5.89□□□□□ -1.47
VPS52YDR484W DPL1Q05567 589 aa5.89□□□□□ -1.47
VPS52YDR484W GYP1Q08484 637 aa5.88□□□□□ -1.47
VPS52YDR484W AMS1P22855 1083 aa5.87□□□□□ -1.47
VPS52YDR484W YPR015CQ12531 247 aa5.87□□□□□ -1.47
VPS52YDR484W SLI15P38283 698 aa5.86□□□□□ -1.47
VPS52YDR484W ISU2Q12056 156 aa5.84□□□□□ -1.48
VPS52YDR484W RAM1P22007 431 aa5.82□□□□□ -1.48
VPS52YDR484W YPL062WQ02781 134 aa5.81□□□□□ -1.48
VPS52YDR484W NOP53Q12080 455 aaKnown RBP5.8□□□□□ -1.48
VPS52YDR484W SAS4Q04003 481 aa5.78□□□□□ -1.48
VPS52YDR484W YEL077CQ3E7X8 1277 aa5.76□□□□□ -1.49
VPS52YDR484W CDC73Q06697 393 aa5.74□□□□□ -1.49
VPS52YDR484W PDR1P12383 1068 aa5.73□□□□□ -1.49
VPS52YDR484W SDH2P21801 266 aa5.73□□□□□ -1.49
VPS52YDR484W GBP2P25555 427 aaKnown RBP RIP-Chip data5.72□□□□□ -1.49not detected
VPS52YDR484W KEX1P09620 729 aa5.71□□□□□ -1.5
VPS52YDR484W GAR1P28007 205 aaKnown RBP5.7□□□□□ -1.5
VPS52YDR484W MRF1P30775 413 aaPredicted RBP5.7□□□□□ -1.5
VPS52YDR484W GCR2Q01722 534 aa5.67□□□□□ -1.5
VPS52YDR484W BRE2P43132 505 aa5.66□□□□□ -1.5
VPS52YDR484W RPP1BP10622 106 aaKnown RBP5.62□□□□□ -1.51
VPS52YDR484W ERG12P07277 443 aa5.61□□□□□ -1.51
VPS52YDR484W PRT1P06103 763 aaKnown RBP5.6□□□□□ -1.51
VPS52YDR484W BUD20Q08004 166 aaPredicted RBP5.6□□□□□ -1.51
VPS52YDR484W YLR326WQ06170 240 aaKnown RBP5.59□□□□□ -1.51
VPS52YDR484W UBP14P38237 781 aaKnown RBP5.58□□□□□ -1.52
VPS52YDR484W AIR1P40507 360 aaKnown RBP5.58□□□□□ -1.52
VPS52YDR484W VHR2P40041 505 aa5.57□□□□□ -1.52
VPS52YDR484W RAD54P32863 898 aa5.56□□□□□ -1.52
VPS52YDR484W PCS60P38137 543 aaKnown RBP RIP-Chip data5.56□□□□□ -1.52not detected
VPS52YDR484W YRR1Q12172 810 aa5.55□□□□□ -1.52
VPS52YDR484W CLA4P48562 842 aa5.54□□□□□ -1.52
VPS52YDR484W PEX21P50091 288 aa5.54□□□□□ -1.52
VPS52YDR484W CST6P40535 587 aa5.53□□□□□ -1.52
VPS52YDR484W ISM1P48526 1002 aa5.52□□□□□ -1.53
VPS52YDR484W MET22P32179 357 aa5.5□□□□□ -1.53
VPS52YDR484W STR2P47164 639 aa5.5□□□□□ -1.53
VPS52YDR484W CDC4P07834 779 aa5.48□□□□□ -1.53
VPS52YDR484W SPT16P32558 1035 aaKnown RBP5.48□□□□□ -1.53
VPS52YDR484W NPL4P33755 580 aa5.48□□□□□ -1.53
VPS52YDR484W LAM6Q08001 693 aa5.48□□□□□ -1.53
VPS52YDR484W GCD11P32481 527 aaKnown RBP5.47□□□□□ -1.53
VPS52YDR484W FRK1Q03002 865 aaPredicted RBP5.47□□□□□ -1.53
VPS52YDR484W NUD1P32336 851 aa5.46□□□□□ -1.53
VPS52YDR484W ENV9Q08651 330 aa5.46□□□□□ -1.53
VPS52YDR484W KIC1P38692 1080 aa5.45□□□□□ -1.54
VPS52YDR484W SET1P38827 1080 aaKnown RBP5.44□□□□□ -1.54
VPS52YDR484W TUM1Q08686 304 aaKnown RBP5.44□□□□□ -1.54
VPS52YDR484W TFB4Q12004 338 aa5.44□□□□□ -1.54
VPS52YDR484W CSC1Q06538 782 aa5.43□□□□□ -1.54
VPS52YDR484W RQC2Q12532 1038 aaKnown RBP5.43□□□□□ -1.54
VPS52YDR484W YDR444WQ04093 687 aa5.42□□□□□ -1.54
VPS52YDR484W BDP1P46678 594 aa5.4□□□□□ -1.55
VPS52YDR484W GAP1P19145 602 aaPredicted RBP5.39□□□□□ -1.55
VPS52YDR484W YDR090CQ03193 310 aa5.39□□□□□ -1.55
VPS52YDR484W HED1Q03937 162 aa5.39□□□□□ -1.55
VPS52YDR484W SEC2P17065 759 aa5.38□□□□□ -1.55
VPS52YDR484W TY1A-DR4O74302 440 aa5.38□□□□□ -1.55
VPS52YDR484W TY1A-HP0C2I4 478 aaKnown RBP5.38□□□□□ -1.55
Retrieved 100 of 5,963 RNA–protein pairs in 21.3 ms